BLASTX nr result

ID: Scutellaria23_contig00018030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018030
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cy...   232   8e-59
ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cy...   219   7e-55
ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycin...   217   2e-54
ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|2...   212   9e-53
ref|XP_002529948.1| RNA-binding protein, putative [Ricinus commu...   211   2e-52

>ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
           [Vitis vinifera] gi|296088694|emb|CBI38144.3| unnamed
           protein product [Vitis vinifera]
          Length = 292

 Score =  232 bits (591), Expect = 8e-59
 Identities = 127/203 (62%), Positives = 144/203 (70%), Gaps = 3/203 (1%)
 Frame = -3

Query: 601 SNSNADLKSEL---KMKEIDDMLKDLKLNPMAKEFFPSSYNYGQLGDYEFVFSDKNLGND 431
           S+ N+D KSE        I DML +LKLNP+AKEFFPSSY++  L   +F    K+  ND
Sbjct: 17  SSKNSDSKSEFGAGMQSMIVDMLSNLKLNPLAKEFFPSSYSHDHLIPTDF---SKDSPND 73

Query: 430 GFPXXXXXXXXXXXXXXXXXXRAFKAQREDSIRRTVYVSDIDHNVTEERLAALFSSYGQV 251
            +P                  RAF+AQREDSIRRTVYVSDID +VTEERLAALFSS GQV
Sbjct: 74  AYPNNRRRRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQV 133

Query: 250 VDCRVCGDPHSRLRFAFVEFSDDYXXXXXXXXXXXXXGFSPIKVLPSKTAILPVNPTFLP 71
           VDCRVCGDPHS LRFAFVEF+D++             G+ P++VLPSKTAILPVNPTFLP
Sbjct: 134 VDCRVCGDPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLP 193

Query: 70  RSEDEREMCARTVYCTNIDKKVS 2
           RSEDEREMCARTVYCTNIDKKVS
Sbjct: 194 RSEDEREMCARTVYCTNIDKKVS 216


>ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Glycine max]
          Length = 296

 Score =  219 bits (557), Expect = 7e-55
 Identities = 118/208 (56%), Positives = 141/208 (67%), Gaps = 9/208 (4%)
 Frame = -3

Query: 598 NSNADLKSELKMKEIDDMLKDLKLNPMAKEFFPSSYN---------YGQLGDYEFVFSDK 446
           +S    +SE  ++++ DM    KLNP+AKEFFPSSY+         + QL    F+ S K
Sbjct: 15  DSKPKAESEFSVQKLVDMFT--KLNPLAKEFFPSSYSPNHDNRFQGFNQLSPTHFLVSTK 72

Query: 445 NLGNDGFPXXXXXXXXXXXXXXXXXXRAFKAQREDSIRRTVYVSDIDHNVTEERLAALFS 266
              ++ FP                  R+ KAQREDSIRRTVYVS+ID +VTEERLAALFS
Sbjct: 73  PSADENFPNNRRRRNSFNQGRRKVSGRSLKAQREDSIRRTVYVSEIDQHVTEERLAALFS 132

Query: 265 SYGQVVDCRVCGDPHSRLRFAFVEFSDDYXXXXXXXXXXXXXGFSPIKVLPSKTAILPVN 86
           S GQV+DCR+CGDPHS LRFAFVEF+D+Y             G+ P++VLPSKTAILPVN
Sbjct: 133 SCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLPSKTAILPVN 192

Query: 85  PTFLPRSEDEREMCARTVYCTNIDKKVS 2
           PTFLPRS+DEREMCARTVYCTNIDKKVS
Sbjct: 193 PTFLPRSDDEREMCARTVYCTNIDKKVS 220


>ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycine max]
           gi|255639113|gb|ACU19856.1| unknown [Glycine max]
          Length = 296

 Score =  217 bits (553), Expect = 2e-54
 Identities = 117/208 (56%), Positives = 141/208 (67%), Gaps = 9/208 (4%)
 Frame = -3

Query: 598 NSNADLKSELKMKEIDDMLKDLKLNPMAKEFFPSSYN---------YGQLGDYEFVFSDK 446
           +S    +SE  ++++ DM    KLNP+AKEFFPSSY+         + QL   +F+ S K
Sbjct: 15  DSKPKAESEFSVQKLVDMFT--KLNPLAKEFFPSSYSPNHDHGFQGFNQLSPTQFLVSTK 72

Query: 445 NLGNDGFPXXXXXXXXXXXXXXXXXXRAFKAQREDSIRRTVYVSDIDHNVTEERLAALFS 266
              N+ F                   R+ KAQREDSIRRTVYVS+ID +VTEERLAALFS
Sbjct: 73  PSANENFLNSRRRRNSFNQGRRRVSGRSLKAQREDSIRRTVYVSEIDQHVTEERLAALFS 132

Query: 265 SYGQVVDCRVCGDPHSRLRFAFVEFSDDYXXXXXXXXXXXXXGFSPIKVLPSKTAILPVN 86
           S GQV+DCR+CGDPHS LRFAFVEF+D+Y             G+ P++VLPSKTAILPVN
Sbjct: 133 SCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLPSKTAILPVN 192

Query: 85  PTFLPRSEDEREMCARTVYCTNIDKKVS 2
           PTFLPRS+DEREMCART+YCTNIDKKVS
Sbjct: 193 PTFLPRSDDEREMCARTIYCTNIDKKVS 220


>ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|222846171|gb|EEE83718.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  212 bits (539), Expect = 9e-53
 Identities = 118/204 (57%), Positives = 135/204 (66%), Gaps = 3/204 (1%)
 Frame = -3

Query: 604 DSNSNADLKSELKMKEIDDMLKDLKLNPMAKEFFPSSY---NYGQLGDYEFVFSDKNLGN 434
           DS +    +SE  ++++ DM    KLNP+AKEFFPSSY   N  +L    F    K   N
Sbjct: 32  DSETKPTSESEFTVQKLVDMFT--KLNPLAKEFFPSSYSKNNPNELHFNNFAVPVKQSAN 89

Query: 433 DGFPXXXXXXXXXXXXXXXXXXRAFKAQREDSIRRTVYVSDIDHNVTEERLAALFSSYGQ 254
           D FP                   A++AQ+EDSIRRTVYVSDID +VTEERLA LFS  GQ
Sbjct: 90  DNFPKRKRNNFNQGRRKLNGR--AYRAQQEDSIRRTVYVSDIDQHVTEERLAGLFSGCGQ 147

Query: 253 VVDCRVCGDPHSRLRFAFVEFSDDYXXXXXXXXXXXXXGFSPIKVLPSKTAILPVNPTFL 74
           VVDCRVCGDPHS LRFAFVEF+D+              G+ P++VLPSKTAILPVNPTFL
Sbjct: 148 VVDCRVCGDPHSVLRFAFVEFADEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFL 207

Query: 73  PRSEDEREMCARTVYCTNIDKKVS 2
           PRSEDEREMC RTVYCTNIDKKVS
Sbjct: 208 PRSEDEREMCTRTVYCTNIDKKVS 231


>ref|XP_002529948.1| RNA-binding protein, putative [Ricinus communis]
           gi|223530546|gb|EEF32425.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 281

 Score =  211 bits (536), Expect = 2e-52
 Identities = 121/220 (55%), Positives = 145/220 (65%), Gaps = 11/220 (5%)
 Frame = -3

Query: 628 EING---VKDSDSNSNADLK-SELKMKEIDDMLKDLKLNPMAKEFFPSSYNYGQLGDYEF 461
           EI G   +  ++   ++D+K SE  ++++ DM    KLNP+AKEFFPSSYN   +  + F
Sbjct: 6   EITGEVAIASNNKKMDSDVKNSEFSVQKLVDMFT--KLNPLAKEFFPSSYNNNNI-THNF 62

Query: 460 -------VFSDKNLGNDGFPXXXXXXXXXXXXXXXXXXRAFKAQREDSIRRTVYVSDIDH 302
                  V  DK    D F                   RA++AQR+DSIRRTVYVSDID 
Sbjct: 63  LNLNNFAVVVDKQSPIDNFSSNRRKRNNYNQGKRRLNGRAYRAQRDDSIRRTVYVSDIDQ 122

Query: 301 NVTEERLAALFSSYGQVVDCRVCGDPHSRLRFAFVEFSDDYXXXXXXXXXXXXXGFSPIK 122
           +VTEERLA LFSS GQVVDCRVCGDPHS LRFAFVEF+D++             G+ P +
Sbjct: 123 HVTEERLAGLFSSCGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNLGGTVLGYYPFR 182

Query: 121 VLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNIDKKVS 2
           VLPSKTAILPVNPTFLPRSEDEREMC+RTVYCTNIDKK+S
Sbjct: 183 VLPSKTAILPVNPTFLPRSEDEREMCSRTVYCTNIDKKIS 222


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