BLASTX nr result

ID: Scutellaria23_contig00018005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018005
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16
emb|CBI21323.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...    79   4e-13
ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10

>ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 640

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/89 (50%), Positives = 62/89 (69%)
 Frame = +3

Query: 3   FNMSVKQDVKLGNTLLTKFVHCLCKEGFFLPASQLLRELTCGKAIKHLESHLTLLRYLAD 182
           F+ SV+QDV L  TLL+ F+ CLCK G FL AS+LLR L    A  H +SH+TLL+  AD
Sbjct: 526 FSKSVEQDVNLAATLLSTFILCLCKVGHFLAASKLLRGLASDVA--HPDSHVTLLKGFAD 583

Query: 183 TGELSLASEHLQWIADKSPALLHGIPPDL 269
            GE+SLA +H++W+ + SP++L  I  +L
Sbjct: 584 AGEVSLAKQHVEWVQETSPSMLSVISTEL 612


>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/91 (46%), Positives = 58/91 (63%)
 Frame = +3

Query: 3   FNMSVKQDVKLGNTLLTKFVHCLCKEGFFLPASQLLRELTCGKAIKHLESHLTLLRYLAD 182
           F  SV+QDV L  T+L  F+  +CKEG FL AS+LL  LT    + H +SH+  L+YLAD
Sbjct: 526 FKKSVEQDVMLAQTILNTFILYICKEGNFLFASKLLCGLTYD--VGHSDSHVIFLKYLAD 583

Query: 183 TGELSLASEHLQWIADKSPALLHGIPPDLGA 275
             E+S A EH++W+ D  P++L  I  +L A
Sbjct: 584 ASEISTAIEHIKWVGDTLPSMLPTISTELFA 614


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/91 (46%), Positives = 58/91 (63%)
 Frame = +3

Query: 3   FNMSVKQDVKLGNTLLTKFVHCLCKEGFFLPASQLLRELTCGKAIKHLESHLTLLRYLAD 182
           F  SV+QDV L  T+L  F+  +CKEG FL AS+LL  LT    + H +SH+  L+YLAD
Sbjct: 526 FKKSVEQDVMLAQTILNTFILYICKEGNFLFASKLLCGLTYD--VGHSDSHVIFLKYLAD 583

Query: 183 TGELSLASEHLQWIADKSPALLHGIPPDLGA 275
             E+S A EH++W+ D  P++L  I  +L A
Sbjct: 584 ASEISTAIEHIKWVGDTLPSMLPTISTELFA 614


>ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 635

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/89 (46%), Positives = 58/89 (65%)
 Frame = +3

Query: 3   FNMSVKQDVKLGNTLLTKFVHCLCKEGFFLPASQLLRELTCGKAIKHLESHLTLLRYLAD 182
           F+ SV+QDV L  TLL+ F+ C      FL AS+LLR L    A  H +SH+TLL+  AD
Sbjct: 526 FSKSVEQDVNLAATLLSTFILC-----HFLAASKLLRGLASDVA--HPDSHVTLLKGFAD 578

Query: 183 TGELSLASEHLQWIADKSPALLHGIPPDL 269
            GE+SLA +H++W+ + SP++L  I  +L
Sbjct: 579 AGEVSLAKQHVEWVQETSPSMLSVISTEL 607


>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/85 (42%), Positives = 54/85 (63%)
 Frame = +3

Query: 3   FNMSVKQDVKLGNTLLTKFVHCLCKEGFFLPASQLLRELTCGKAIKHLESHLTLLRYLAD 182
           +N SVKQD+ L   +L+ F+  LC++G  + AS+LL  L     I   ESH+ LL  LA+
Sbjct: 522 YNKSVKQDIILARDILSSFISSLCRKGHLMAASKLLCSLN--HDIGCAESHVILLESLAN 579

Query: 183 TGELSLASEHLQWIADKSPALLHGI 257
             E+ +A EHL+W+ +KSP++L  I
Sbjct: 580 AQEIPIAIEHLKWVQEKSPSILQDI 604


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