BLASTX nr result

ID: Scutellaria23_contig00018001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018001
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC99310.1| CONSTANS-like protein 2 [Malus x domestica] gi|18...    77   2e-12
gb|ABH09237.1| CONSTANS-like protein [Solanum tuberosum]               77   2e-12
ref|XP_002533687.1| zinc finger protein, putative [Ricinus commu...    76   5e-12
ref|XP_002309695.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
gb|ACC95129.1| COL1 [Beta vulgaris subsp. vulgaris]                    75   7e-12

>gb|AAC99310.1| CONSTANS-like protein 2 [Malus x domestica]
           gi|189014384|gb|ACD69428.1| CONSTANS-like 2 [Malus x
           domestica] gi|302398739|gb|ADL36664.1| COL domain class
           transcription factor [Malus x domestica]
          Length = 329

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
 Frame = +3

Query: 468 VTARPCDSCXXXXXTVFCRADSAFLCVTCDGRVHAAH---TRHPRVWVCEVCE 617
           + ++ CDSC     T+FCRADSAFLCV CD ++HAA+   +RHPRVW+CEVCE
Sbjct: 1   MASKLCDSCQSATATLFCRADSAFLCVNCDSKIHAANKLASRHPRVWLCEVCE 53


>gb|ABH09237.1| CONSTANS-like protein [Solanum tuberosum]
          Length = 360

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 3/59 (5%)
 Frame = +3

Query: 450 GVLDLDVTARPCDSCXXXXXTVFCRADSAFLCVTCDGRVHAAH---TRHPRVWVCEVCE 617
           G  +  +TA+ CDSC     TVFCRADSAFLC+ CD ++HAA+   +RH RVWVCEVCE
Sbjct: 2   GTENWSLTAKLCDSCKTTPATVFCRADSAFLCLGCDCKIHAANKLASRHARVWVCEVCE 60


>ref|XP_002533687.1| zinc finger protein, putative [Ricinus communis]
           gi|223526413|gb|EEF28695.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 388

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
 Frame = +3

Query: 468 VTARPCDSCXXXXXTVFCRADSAFLCVTCDGRVHAAH---TRHPRVWVCEVCE 617
           V AR CDSC      VFCRADSAFLC+ CD ++HAA+   +RH RVW+CEVCE
Sbjct: 17  VAARRCDSCKTAAAAVFCRADSAFLCLNCDAKIHAANKLVSRHERVWMCEVCE 69


>ref|XP_002309695.1| predicted protein [Populus trichocarpa] gi|222855671|gb|EEE93218.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
 Frame = +3

Query: 468 VTARPCDSCXXXXXTVFCRADSAFLCVTCDGRVHAAH---TRHPRVWVCEVCE 617
           + ++ CDSC     T+FCRADSAFLCV+CD ++HAA+   +RH RVWVCEVCE
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCVSCDSKIHAANKLASRHARVWVCEVCE 53


>gb|ACC95129.1| COL1 [Beta vulgaris subsp. vulgaris]
          Length = 367

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 33/56 (58%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
 Frame = +3

Query: 459 DLDVTARPCDSCXXXXXTVFCRADSAFLCVTCDGRVHAAH---TRHPRVWVCEVCE 617
           D +  AR CD+C     TV+CRADSAFLC +CD R+HAA+   +RH RVWVCE CE
Sbjct: 10  DTNSWARVCDTCRAAPCTVYCRADSAFLCTSCDARIHAANQVASRHERVWVCEACE 65


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