BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017936
         (1368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   365   2e-98
gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]        357   4e-96
gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tR...   357   5e-96
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]   356   9e-96
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   351   2e-94

>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 584

 Score =  365 bits (936), Expect = 2e-98
 Identities = 215/400 (53%), Positives = 263/400 (65%), Gaps = 27/400 (6%)
 Frame = -3

Query: 1324 GSGNVLVKCVECSERGRKVFGVMGRPSFESKSVSDVVEIGSDNNGGALEEHKVEENSSVD 1145
            GSG+ LVKC+ECSERGRKV G +G+ SFESKS +   +I   N G A+   +++E+ S+ 
Sbjct: 194  GSGDELVKCLECSERGRKVIGAVGKRSFESKSEAFQTDILL-NGGCAIANCEIKEDISMS 252

Query: 1144 NEIRNDDTVKKTSIESENFEASQNEKMEDDKAIS----LSNE---TVVADTK---VVVSC 995
             +  N   V+  S   E    S NE  E + A+     LSN     V +D+K   V+VS 
Sbjct: 253  MD--NAHGVRMHSEFVEQTNVSHNEDSETESAMPRTDILSNSEDGNVKSDSKQEEVMVSE 310

Query: 994  SAEGDGDADCNNVSSETKKLLETGVENTGETKEDKLECENTDDHFAKSENKSEFSYGEEV 815
             A   G+ +   +  ++K        + GE      E  N ++H  K    SEF YGEE 
Sbjct: 311  DAADGGNKESETMEKDSKA-------SVGE------ERVNGEEHVMKG---SEFCYGEEE 354

Query: 814  KERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTIVNVDGIAFVKCEVVGQS 635
            KE+FNRILKYY G+HNFHNFTTRTKAEDP+A+RYI+SF+A T V V+GI FVKCEV+GQS
Sbjct: 355  KEKFNRILKYYVGSHNFHNFTTRTKAEDPSAQRYIISFDARTTVTVEGIEFVKCEVIGQS 414

Query: 634  FMLHQIRKMIGLAVAIIRNCSPESLIEKAFHQNVNITVPMAPEVGLYLDECFFSSYNKKW 455
            FMLHQIRKMIGLAVAI+RNC+PESLI  A  ++V I VP APEVGLYLDECFF+SYN+KW
Sbjct: 415  FMLHQIRKMIGLAVAIMRNCAPESLISTALQKDVKINVPTAPEVGLYLDECFFTSYNQKW 474

Query: 454  KDTHEELSMKDYAEEAEDFKMKYIYSHIASSEHKDGAVALWLHSLNYRNYPDLRV----- 290
            KD HEEL MKDY E AEDFKMKYIYSHIAS+E K+G V LWLHSLNYRNYPDLR      
Sbjct: 475  KD-HEELCMKDYEEVAEDFKMKYIYSHIASTEQKEGVVGLWLHSLNYRNYPDLRFCYTLD 533

Query: 289  ADNTPSTDKV------------VENLPSYDVQPDGIVNNM 206
            A+N  ST+ V             +N    DV+ +G V NM
Sbjct: 534  ANNEKSTEVVNNGDANSEESAQEKNSEDADVEKNGKVENM 573


>gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]
          Length = 565

 Score =  357 bits (916), Expect = 4e-96
 Identities = 198/367 (53%), Positives = 247/367 (67%), Gaps = 14/367 (3%)
 Frame = -3

Query: 1324 GSGNVLVKCVECSERGRKVFGVMGR----PSFESKSVSDVVEIGSDNNGGALEEHKVEEN 1157
            GSG+ L KC+ECSERGRK+ GVMGR    PS     V   VE  S +  G L + K +  
Sbjct: 192  GSGSELTKCLECSERGRKIPGVMGREGKLPSPGQNGVDAPVEGSSHDESGTLGDAKCDHT 251

Query: 1156 SSVDNEIRNDDTVKKTSIESENFEASQNEKMEDDKAISLSNETVVADTKVVVSCSAEGDG 977
            SS  N                + E   N K + D  +S  + T VA+ K+     + GDG
Sbjct: 252  SSDGNN------------PFAHGEVGSNSKEKPDLPVS-GDRTEVANAKM----GSNGDG 294

Query: 976  ------DADCNNVSSETKKLLETGVENTGETKE-DKLECENTDDHFAKSENKSEFSYGEE 818
                  DAD   + +E KKL     EN  +  E +K+  E       K   KS FSY +E
Sbjct: 295  AVVSSADADIY-IGNEEKKLEPAATENKAQGMESEKINGEE------KLPTKSTFSYTDE 347

Query: 817  VKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTIVNVDGIAFVKCEVVGQ 638
            VKERFNRILKYY GTHNFHNFTTRTKAEDPAAKR+I+SF A+ +V++DGI FV+CEVVGQ
Sbjct: 348  VKERFNRILKYYIGTHNFHNFTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQ 407

Query: 637  SFMLHQIRKMIGLAVAIIRNCSPESLIEKAFHQNVNITVPMAPEVGLYLDECFFSSYNKK 458
            SFMLHQIRKMIGLAVA++RNC+PES+ + AF ++VN+ VP APEVGLYLDEC F+SYNKK
Sbjct: 408  SFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKK 467

Query: 457  WKDTHEELSMKDYAEEAEDFKMKYIYSHIASSEHKDGAVALWLHSLNYRNYPDLR---VA 287
            WKD+HE +SM+ Y+EEAE+FK+KYI++HIA+ EHK+GAVALWLHSLN+RNYPD R    A
Sbjct: 468  WKDSHEAVSMEPYSEEAEEFKVKYIFTHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETA 527

Query: 286  DNTPSTD 266
            ++ P  +
Sbjct: 528  EHNPGAE 534


>gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tRNA pseudouridine
            synthase family protein [Zea mays]
          Length = 562

 Score =  357 bits (915), Expect = 5e-96
 Identities = 195/363 (53%), Positives = 246/363 (67%), Gaps = 10/363 (2%)
 Frame = -3

Query: 1324 GSGNVLVKCVECSERGRKVFGVMGR----PSFESKSVSDVVEIGSDNNGGALEEHKVEEN 1157
            GSG+ L KC+ECSERGRK+ GVMGR    PS     V   VE  S +  G L + K +  
Sbjct: 192  GSGSELTKCLECSERGRKIPGVMGREGKLPSPGQNGVDAPVEGSSHDESGTLGDAKCDHT 251

Query: 1156 SSVDNEIRNDDTVKKTSIESENFEASQNEKMEDDKAISLSNETVVADTKVVVSCSAEGDG 977
            SS  N                + E   N K + D  +S  + T VA+ K+     + GDG
Sbjct: 252  SSDGNN------------PFAHGEVGSNSKEKPDLPVS-GDRTEVANAKM----GSNGDG 294

Query: 976  DADCNNV--SSETKKLLETGVENTGETKE-DKLECENTDDHFAKSENKSEFSYGEEVKER 806
                +++   +E KKL     EN  +  E +K+  E       K   KS FSY +EVKER
Sbjct: 295  AVVSSDIYIGNEEKKLEPAATENKAQGMESEKINGEE------KLPTKSTFSYTDEVKER 348

Query: 805  FNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTIVNVDGIAFVKCEVVGQSFML 626
            FNRILKYY GTHNFHNFTTRTKAEDPAAKR+I+SF A+ +V++DGI FV+CEVVGQSFML
Sbjct: 349  FNRILKYYIGTHNFHNFTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFML 408

Query: 625  HQIRKMIGLAVAIIRNCSPESLIEKAFHQNVNITVPMAPEVGLYLDECFFSSYNKKWKDT 446
            HQIRKMIGLAVA++RNC+PES+ + AF ++VN+ VP APEVGLYLDEC F+SYNKKWKD+
Sbjct: 409  HQIRKMIGLAVAVMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDS 468

Query: 445  HEELSMKDYAEEAEDFKMKYIYSHIASSEHKDGAVALWLHSLNYRNYPDLR---VADNTP 275
            HE +SM+ Y+EEAE+FK+KYI++HIA+ EHK+GAVALWLHSLN+RNYPD R    A++ P
Sbjct: 469  HEAVSMEPYSEEAEEFKVKYIFTHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETAEHNP 528

Query: 274  STD 266
              +
Sbjct: 529  GAE 531


>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
          Length = 559

 Score =  356 bits (913), Expect = 9e-96
 Identities = 200/383 (52%), Positives = 256/383 (66%), Gaps = 30/383 (7%)
 Frame = -3

Query: 1324 GSGNVLVKCVECSERGRKVFGVMGRPSFESK-SVSD----------VVEIG-SDNNGGAL 1181
            GS N LVKC+ECSERGRKV G+MG+ SFESK SV D          +V++G   N+  A+
Sbjct: 167  GSENELVKCLECSERGRKVVGIMGKRSFESKVSVDDREDVEGESKNIVQLGIPSNDEAAI 226

Query: 1180 EEHKVEEN---SSVDNEIRNDDTVKKTSIESENFEASQNEKMEDDKAISLSNETVVADTK 1010
               +V+E    +S +N I  ++++ +T I+ E  + S     E     +  +E V     
Sbjct: 227  VNSEVQEEIKATSNNNNIDANNSISET-IKEEAAKLSSEVDAEIINGENSISEPVKVGAA 285

Query: 1009 VVVS-----CSAEGDGDADCNNVSSETKKLLETGVENTGETKEDKL----------ECEN 875
            ++ S       A  D   D N++S   K+        T E+  D              E 
Sbjct: 286  ILKSEAKEESMASSDNRHDGNSISQPIKEGRCFQDNETSESTPDSRASAQNEPGVSHSEQ 345

Query: 874  TDDHFAKSENKSEFSYGEEVKERFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNA 695
            +D    K E  S F YG++ +ERFNRIL +Y GTHNFHNFTTR KAEDP+A+R+I+SF+ 
Sbjct: 346  SDKGENKLEKGSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDG 405

Query: 694  NTIVNVDGIAFVKCEVVGQSFMLHQIRKMIGLAVAIIRNCSPESLIEKAFHQNVNITVPM 515
            NTIV V+GI FVKCEVVGQSFMLHQIRKMIGLAVAI+RN +PESL+E A  ++VNI VP 
Sbjct: 406  NTIVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPT 465

Query: 514  APEVGLYLDECFFSSYNKKWKDTHEELSMKDYAEEAEDFKMKYIYSHIASSEHKDGAVAL 335
            APEVGLYLDECFFSSYNKKW+D+HEE+SMK YAEEAE+FKMK++YSHIA++EHK+G VAL
Sbjct: 466  APEVGLYLDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVAL 525

Query: 334  WLHSLNYRNYPDLRVADNTPSTD 266
            WLHSLN+RNYPDL + DN  ++D
Sbjct: 526  WLHSLNHRNYPDLCIGDNGAASD 548


>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
            vinifera]
          Length = 503

 Score =  351 bits (901), Expect = 2e-94
 Identities = 187/358 (52%), Positives = 240/358 (67%), Gaps = 5/358 (1%)
 Frame = -3

Query: 1324 GSGNVLVKCVECSERGRKVFGVMGRPSFESK-SVSDVVEIGSDNN---GGALEEHKVEEN 1157
            GS N LVKC+ECSERGRKV G+MG+ SFESK SV D  ++  ++    G A+ + + +E 
Sbjct: 179  GSENELVKCLECSERGRKVVGIMGKRSFESKVSVDDREDVEGESKNIVGAAILKSEAKEE 238

Query: 1156 SSVDNEIRND-DTVKKTSIESENFEASQNEKMEDDKAISLSNETVVADTKVVVSCSAEGD 980
            S   ++ R+D +++ +   E   F+ ++  +   D   S  NE  V+ +           
Sbjct: 239  SMASSDNRHDGNSISQPIKEGRCFQDNETSESTPDSRASAQNEPGVSHS----------- 287

Query: 979  GDADCNNVSSETKKLLETGVENTGETKEDKLECENTDDHFAKSENKSEFSYGEEVKERFN 800
                                             E +D    K E  S F YG++ +ERFN
Sbjct: 288  ---------------------------------EQSDKGENKLEKGSGFCYGDKERERFN 314

Query: 799  RILKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTIVNVDGIAFVKCEVVGQSFMLHQ 620
            RIL +Y GTHNFHNFTTR KAEDP+A+R+I+SF+ NTIV V+GI FVKCEVVGQSFMLHQ
Sbjct: 315  RILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLHQ 374

Query: 619  IRKMIGLAVAIIRNCSPESLIEKAFHQNVNITVPMAPEVGLYLDECFFSSYNKKWKDTHE 440
            IRKMIGLAVAI+RN +PESL+E A  ++VNI VP APEVGLYLDECFFSSYNKKW+D+HE
Sbjct: 375  IRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKWRDSHE 434

Query: 439  ELSMKDYAEEAEDFKMKYIYSHIASSEHKDGAVALWLHSLNYRNYPDLRVADNTPSTD 266
            E+SMK YAEEAE+FKMK++YSHIA++EHK+G VALWLHSLN+RNYPDL + DN  ++D
Sbjct: 435  EVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDLCIGDNGAASD 492