BLASTX nr result

ID: Scutellaria23_contig00017719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017719
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata sub...    73   2e-11
emb|CCD74546.1| F-box family protein [Arabidopsis halleri subsp....    72   4e-11
ref|NP_180173.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    72   6e-11
gb|AAN52167.1| hypothetical protein [Arabidopsis thaliana]             72   6e-11
ref|NP_197662.2| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    69   4e-10

>ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326574|gb|EFH56994.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = -1

Query: 270 DRLSELPDSLIMQILSSLPMVDVVRTSILSKRWNHLWTTTPFLDFKDVGNDPVRFHNFVN 91
           DR+SELPDSL+ QILS LP  D V+TS+LSKRW  LW   P LD K        + +F++
Sbjct: 4   DRISELPDSLLTQILSYLPTKDSVKTSVLSKRWEFLWLRVPVLDLKVSNFPEENYASFID 63

Query: 90  AFLTLWNGTKIIKFSVVF-HHGYENDDL 10
            FL     +++ KF + +  + Y++D L
Sbjct: 64  NFLEFNRNSRMRKFKLKYDEYTYDDDRL 91


>emb|CCD74546.1| F-box family protein [Arabidopsis halleri subsp. halleri]
          Length = 530

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = -1

Query: 270 DRLSELPDSLIMQILSSLPMVDVVRTSILSKRWNHLWTTTPFLDFKDVGNDPVRFHNFVN 91
           DR+SELPDSL+ QILS LP  D V+TS+LSKRW  LW   P LD K        + +F++
Sbjct: 93  DRISELPDSLLTQILSYLPTKDSVKTSLLSKRWEFLWLRVPVLDLKVSDFPDENYASFID 152

Query: 90  AFLTLWNGTKIIKFSVVF-HHGYENDDL 10
            FL     +++ KF + +  + Y++D L
Sbjct: 153 NFLEFNRNSRMRKFKLKYDEYTYDDDRL 180


>ref|NP_180173.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|79323090|ref|NP_001031420.1| F-box/FBD/LRR-repeat
           protein [Arabidopsis thaliana]
           gi|143016455|sp|Q8H1M0.2|FDL16_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At2g26030
           gi|3413710|gb|AAC31233.1| hypothetical protein
           [Arabidopsis thaliana] gi|50058977|gb|AAT69233.1|
           hypothetical protein At2g26030 [Arabidopsis thaliana]
           gi|51971321|dbj|BAD44325.1| unknown protein [Arabidopsis
           thaliana] gi|330252692|gb|AEC07786.1|
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|330252693|gb|AEC07787.1| F-box/FBD/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 442

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = -1

Query: 270 DRLSELPDSLIMQILSSLPMVDVVRTSILSKRWNHLWTTTPFLDFKDVGNDPVRFHNFVN 91
           DR+ ELPDSL+ Q+LS LP +D V+TS+LSKRW  LW   P LD K        + +F++
Sbjct: 4   DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVSDFPDENYASFID 63

Query: 90  AFLTLWNGTKIIKFSVVF-HHGYENDDL 10
            FL     +++ KF + +  + Y++D L
Sbjct: 64  NFLEFNRKSRMRKFKLKYDEYTYDDDRL 91


>gb|AAN52167.1| hypothetical protein [Arabidopsis thaliana]
          Length = 442

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = -1

Query: 270 DRLSELPDSLIMQILSSLPMVDVVRTSILSKRWNHLWTTTPFLDFKDVGNDPVRFHNFVN 91
           DR+ ELPDSL+ Q+LS LP +D V+TS+LSKRW  LW   P LD K        + +F++
Sbjct: 4   DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVSDFPDENYASFID 63

Query: 90  AFLTLWNGTKIIKFSVVF-HHGYENDDL 10
            FL     +++ KF + +  + Y++D L
Sbjct: 64  NFLEFNRKSRMRKFKLKYDEYTYDDDRL 91


>ref|NP_197662.2| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|143015960|sp|Q9FNJ1.2|FDL47_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At5g22700
           gi|332005682|gb|AED93065.1| F-box/FBD/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 437

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = -1

Query: 270 DRLSELPDSLIMQILSSLPMVDVVRTSILSKRWNHLWTTTPFLDFK-DVGNDPVRFHNFV 94
           DR+S LPD L+ QILS+LP  + V TSILS RW  +W +TP LD   D  +D   F +F 
Sbjct: 6   DRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVLDIDIDAFDDATTFVSFA 65

Query: 93  NAFLTLWNGTKIIKFSVVFHHGYENDDLDL 4
           + FL     + + KF +      E DD+D+
Sbjct: 66  SRFLEFSKDSCLHKFKL----SVERDDVDM 91


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