BLASTX nr result

ID: Scutellaria23_contig00017706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017706
         (1208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516957.1| ring finger protein, putative [Ricinus commu...   173   7e-41
ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|2...   165   2e-38
gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x P...   165   2e-38
gb|AEI72266.1| ring zinc finger transcription factor [Citrus tri...   164   4e-38
ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|2...   163   7e-38

>ref|XP_002516957.1| ring finger protein, putative [Ricinus communis]
            gi|223544045|gb|EEF45571.1| ring finger protein, putative
            [Ricinus communis]
          Length = 292

 Score =  173 bits (439), Expect = 7e-41
 Identities = 113/238 (47%), Positives = 125/238 (52%), Gaps = 10/238 (4%)
 Frame = -1

Query: 1067 SQDLQIEAEPGKGYALSGKIMLSAIVILFAVVVFMVGLHLYARWYXXXXXXXXXXXXXXX 888
            S D   E    KGYALSGKIMLSAI+ILF VV+ MV LHLYARWY               
Sbjct: 5    SPDADNEYSTTKGYALSGKIMLSAIIILFFVVIMMVCLHLYARWYLLNARRRQHRRARNR 64

Query: 887  XXXXXXXVLYAARGLPSSAVDRGLEVAVLNSLPVFLYSGKAEQPPPECAVCLSEFEEKEI 708
                    +  +     +   RGL+ AVLN+LPVF YS K    P ECAVCLSEFEE E 
Sbjct: 65   RAHLIFY-VDPSNANNVTVPSRGLDAAVLNTLPVFAYSSKTHPDPIECAVCLSEFEENER 123

Query: 707  VRLLPKCSHSFHIECIDMWFRSHSTCPLCRSPVERVVGLAEPAVKPED-XXXXXXXXXXX 531
             R LPKC+HSFHIECIDMWF SHSTCPLCRS VE V         PED            
Sbjct: 124  GRTLPKCNHSFHIECIDMWFHSHSTCPLCRSAVEPV---------PEDSVRVNSEINETG 174

Query: 530  XXXXGCGACADAE----GSNTTTSLEGRRKGA----VRIEVPPRRAESASELA-QSPA 384
                 C  C   E    G  +T+S  GRRK A    V IEVP R      E A +SP+
Sbjct: 175  SRAGLCVTCQHEENRVDGVASTSSFNGRRKPAEFVGVTIEVPRRNGVFEDEPATESPS 232


>ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|222838606|gb|EEE76971.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  165 bits (418), Expect = 2e-38
 Identities = 110/219 (50%), Positives = 120/219 (54%), Gaps = 8/219 (3%)
 Frame = -1

Query: 1034 KGYALSGKIMLSAIVILFAVVVFMVGLHLYARWYXXXXXXXXXXXXXXXXXXXXXXVLYA 855
            +GYALSGKIMLSAIVILF VV+ MV LHLYARWY                      V  A
Sbjct: 14   EGYALSGKIMLSAIVILFFVVILMVFLHLYARWYLTRARQRQVRRVRNRRTHLVFYVDSA 73

Query: 854  AR-GLPSSAVDRGLEVAVLNSLPVFLYSGKAEQPPPECAVCLSEFEEKEIVRLLPKCSHS 678
                  +S V RGLE  V NSLPVF+YS K  Q   ECAVCLSEFEE E  R+LPKC+HS
Sbjct: 74   QDPNNVTSHVTRGLEETVKNSLPVFVYSRKTHQDSIECAVCLSEFEENERGRVLPKCNHS 133

Query: 677  FHIECIDMWFRSHSTCPLCRSPVERVVGLAEPAVKPEDXXXXXXXXXXXXXXXGCGACAD 498
            FH ECIDMWF SHSTCPLCRSPVE V   AE  V PE                 C +C  
Sbjct: 134  FHTECIDMWFHSHSTCPLCRSPVEPV---AENPV-PE----GSNFGISEAGSGLCTSCQH 185

Query: 497  AE---GSNTTTSLEGRRKG----AVRIEVPPRRAESASE 402
             E   GS +T+S    RK      V I+VP R      E
Sbjct: 186  EEDHVGSASTSSFNDGRKPVGLIGVTIDVPRRNGNFEDE 224


>gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x Populus alba]
          Length = 293

 Score =  165 bits (418), Expect = 2e-38
 Identities = 112/231 (48%), Positives = 125/231 (54%), Gaps = 8/231 (3%)
 Frame = -1

Query: 1070 DSQDLQIEAEPGKGYALSGKIMLSAIVILFAVVVFMVGLHLYARWYXXXXXXXXXXXXXX 891
            DS+D  IE    +GYALSGKIMLSAI+ILF V++ MV LHLYARWY              
Sbjct: 4    DSRDPPIEYR--EGYALSGKIMLSAILILFFVIIVMVLLHLYARWYLTRARQRQVRRVRN 61

Query: 890  XXXXXXXXVLYAAR-GLPSSAVDRGLEVAVLNSLPVFLYSGKAEQPPPECAVCLSEFEEK 714
                    V         +S V RGLE  V NSLPVF+Y  K  Q   ECAVCLSEFEE 
Sbjct: 62   RRTHLVFYVDSPQNPNNVTSHVTRGLEETVKNSLPVFVYPRKTHQDSIECAVCLSEFEEN 121

Query: 713  EIVRLLPKCSHSFHIECIDMWFRSHSTCPLCRSPVERVVGLAEPAVKPEDXXXXXXXXXX 534
            E  R+LPKC+HSFH ECIDMWF SHSTCPLCRSPVE V   AE  V PE           
Sbjct: 122  ERGRVLPKCNHSFHTECIDMWFHSHSTCPLCRSPVEPV---AENPV-PE----GSNFGIS 173

Query: 533  XXXXXGCGACADAE---GSNTTTSLEGRRKG----AVRIEVPPRRAESASE 402
                  C +C   E   GS +T+S  G RK      V I+VP R      E
Sbjct: 174  EAGSGLCTSCQHEEDHLGSASTSSFNGGRKPVGLIGVTIDVPRRNGNFEDE 224


>gb|AEI72266.1| ring zinc finger transcription factor [Citrus trifoliata]
          Length = 234

 Score =  164 bits (415), Expect = 4e-38
 Identities = 85/157 (54%), Positives = 100/157 (63%)
 Frame = -1

Query: 1034 KGYALSGKIMLSAIVILFAVVVFMVGLHLYARWYXXXXXXXXXXXXXXXXXXXXXXVLYA 855
            +GYALSG+IMLS+IVILF VV+ MV LHLYARWY                        Y 
Sbjct: 15   RGYALSGRIMLSSIVILFFVVILMVCLHLYARWYLVQARRRQVRRHRHRRTQFV---FYV 71

Query: 854  ARGLPSSAVDRGLEVAVLNSLPVFLYSGKAEQPPPECAVCLSEFEEKEIVRLLPKCSHSF 675
                PS+   RGL+ +VL SLPVF+YS K      +CAVCLSEFEE E  R+LP C+HSF
Sbjct: 72   DPTNPSATSSRGLDSSVLKSLPVFVYSSKTHADAMDCAVCLSEFEENESGRVLPGCNHSF 131

Query: 674  HIECIDMWFRSHSTCPLCRSPVERVVGLAEPAVKPED 564
            HI CIDMWF SHSTCPLCR+PVE V    E  V+P++
Sbjct: 132  HIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQPDN 168


>ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|222864548|gb|EEF01679.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  163 bits (413), Expect = 7e-38
 Identities = 101/214 (47%), Positives = 114/214 (53%), Gaps = 5/214 (2%)
 Frame = -1

Query: 1028 YALSGKIMLSAIVILFAVVVFMVGLHLYARWYXXXXXXXXXXXXXXXXXXXXXXVLYAAR 849
            +ALSGKIMLSA+VILF V++ MV LH YARWY                      V  A  
Sbjct: 1    FALSGKIMLSAVVILFLVIILMVCLHFYARWYLIRARRRHIRHARNRRNHLVFYVDSAHN 60

Query: 848  G-LPSSAVDRGLEVAVLNSLPVFLYSGKAEQPPPECAVCLSEFEEKEIVRLLPKCSHSFH 672
              + ++ V RGLE  VL SLPVF+YS K  Q   ECAVCLSEF+E E  R LPKC+HSFH
Sbjct: 61   PTIVTTQVTRGLEETVLKSLPVFVYSEKTHQDSMECAVCLSEFQENETGRTLPKCNHSFH 120

Query: 671  IECIDMWFRSHSTCPLCRSPVERVVGLAEPAVKPEDXXXXXXXXXXXXXXXGCGACADAE 492
            I CIDMWF SHSTCPLCRSPVE V    E  V+                   C    D  
Sbjct: 121  IGCIDMWFHSHSTCPLCRSPVEPV---TENPVQDGPGYGISVPGSGSSSGTMCQHEEDRV 177

Query: 491  GSNTTTSLEGRRKG----AVRIEVPPRRAESASE 402
            GS +T+S   RRK      V IEVP R      E
Sbjct: 178  GSASTSSFNDRRKQMELIGVTIEVPRRNGNFEDE 211


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