BLASTX nr result

ID: Scutellaria23_contig00017616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017616
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa...   104   8e-21
ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...   103   2e-20
gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor]     97   2e-18
gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamari...    97   2e-18
ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycin...    96   5e-18

>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
           gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
           protein [Pisum sativum]
          Length = 146

 Score =  104 bits (260), Expect = 8e-21
 Identities = 53/72 (73%), Positives = 60/72 (83%), Gaps = 3/72 (4%)
 Frame = +1

Query: 1   SFGEVEFARVITDRETGRSKGFGFVNFQTEECATSALSAMDGQELNGRNIRVSYAQERER 180
           S+GEV  ARVITDR+TGRS+GFGFVNF ++E ATSALSAMDGQ+LNGRNIRVSYA +R  
Sbjct: 58  SYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDRPS 117

Query: 181 APR---SNYGGG 207
           APR     YGGG
Sbjct: 118 APRGGGGGYGGG 129


>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/69 (73%), Positives = 58/69 (84%)
 Frame = +1

Query: 1   SFGEVEFARVITDRETGRSKGFGFVNFQTEECATSALSAMDGQELNGRNIRVSYAQERER 180
           SFG+V  ARVITDR+TGRS+GFGFVNF +++ A+SALSAMDGQELNGRNIRVSYA ER  
Sbjct: 62  SFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYANERTP 121

Query: 181 APRSNYGGG 207
            PRS   GG
Sbjct: 122 GPRSGGSGG 130


>gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor]
          Length = 140

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/69 (68%), Positives = 54/69 (78%)
 Frame = +1

Query: 1   SFGEVEFARVITDRETGRSKGFGFVNFQTEECATSALSAMDGQELNGRNIRVSYAQERER 180
           SFG+V  ARVI DR TG+S+GFGFV +   E A+SA+S+MDGQELNGRNIRVSYA ERE 
Sbjct: 57  SFGDVTEARVIMDRNTGKSRGFGFVEYNDTESASSAMSSMDGQELNGRNIRVSYATERES 116

Query: 181 APRSNYGGG 207
            PR   GGG
Sbjct: 117 GPRGGGGGG 125


>gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
          Length = 143

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/68 (72%), Positives = 54/68 (79%)
 Frame = +1

Query: 1   SFGEVEFARVITDRETGRSKGFGFVNFQTEECATSALSAMDGQELNGRNIRVSYAQERER 180
           SFGEV  A+VITDRETGRS+GFGFVNF   E A SALS+MDG ELNGR+IRVS+AQER  
Sbjct: 57  SFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQERSS 116

Query: 181 APRSNYGG 204
            PR   GG
Sbjct: 117 GPRPGGGG 124


>ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
           gi|255627057|gb|ACU13873.1| unknown [Glycine max]
          Length = 143

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 45/68 (66%), Positives = 57/68 (83%)
 Frame = +1

Query: 4   FGEVEFARVITDRETGRSKGFGFVNFQTEECATSALSAMDGQELNGRNIRVSYAQERERA 183
           FG+V  A+VITDR++GRS+GFGFVNF  +E A+SALSAMDG++LNGR+IRVSYA ++  A
Sbjct: 59  FGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYANDKPSA 118

Query: 184 PRSNYGGG 207
           PR   GGG
Sbjct: 119 PRPGGGGG 126


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