BLASTX nr result

ID: Scutellaria23_contig00017609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017609
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002319264.1| predicted protein [Populus trichocarpa] gi|1...   152   2e-35
gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]             150   8e-35
ref|XP_002864345.1| RNA recognition motif-containing protein [Ar...   150   1e-34
ref|NP_200269.1| RNA recognition motif-containing protein [Arabi...   150   1e-34

>ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|222860022|gb|EEE97569.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  152 bits (385), Expect = 2e-35
 Identities = 81/130 (62%), Positives = 99/130 (76%), Gaps = 6/130 (4%)
 Frame = +2

Query: 44  MAMKAATAGVSANSQM---GRGIRVFCS---SFSSFPFNLPQKNVEKPPPAEPSTNLFVS 205
           MAM+A TA ++A +     G  +R+F +   S SSFPF    +       AEP+TNLFVS
Sbjct: 1   MAMRATTAALAAAAAAAPRGGFLRLFSTTSTSSSSFPFPQTTQQTPAREQAEPNTNLFVS 60

Query: 206 GLSKRTTTEGLRDAFAKFGQVVHAKVVTDRVSGYSKGFGFVQYGTIGEAEAGIKGMDGQF 385
           GLSKRTT+EGL++AF+KFG+VV A+VVTDRVSGYSKGFGFV+Y T+ +A  GIKGMDGQF
Sbjct: 61  GLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGMDGQF 120

Query: 386 LDGWVIFAEY 415
           LDGWVIFAEY
Sbjct: 121 LDGWVIFAEY 130


>ref|XP_002319264.1| predicted protein [Populus trichocarpa] gi|118487492|gb|ABK95573.1|
           unknown [Populus trichocarpa]
           gi|222857640|gb|EEE95187.1| predicted protein [Populus
           trichocarpa]
          Length = 149

 Score =  152 bits (385), Expect = 2e-35
 Identities = 80/129 (62%), Positives = 98/129 (75%), Gaps = 5/129 (3%)
 Frame = +2

Query: 44  MAMKAATAGVSANSQMGRG--IRVFCSSF---SSFPFNLPQKNVEKPPPAEPSTNLFVSG 208
           MAM+A  + ++A +   RG  +R+  ++    SSFPF    +       AEP+TNLFVSG
Sbjct: 1   MAMRATMSALAAAAAAPRGGLLRLLSTTSTLSSSFPFPQTTQQTPAREQAEPNTNLFVSG 60

Query: 209 LSKRTTTEGLRDAFAKFGQVVHAKVVTDRVSGYSKGFGFVQYGTIGEAEAGIKGMDGQFL 388
           LSKRTTTEGL++AF+KFG+VV AKVVTDR SGYSKGFGFV+YGT+ +A  GIKGMDGQFL
Sbjct: 61  LSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIKGMDGQFL 120

Query: 389 DGWVIFAEY 415
           DGWVIFAEY
Sbjct: 121 DGWVIFAEY 129


>gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
          Length = 139

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/102 (74%), Positives = 85/102 (83%)
 Frame = +2

Query: 110 FCSSFSSFPFNLPQKNVEKPPPAEPSTNLFVSGLSKRTTTEGLRDAFAKFGQVVHAKVVT 289
           F   FS   F  P   V KPP A+P+TNLFVSGLSKRTTTEGLR+AFAKFG+VVHA+VVT
Sbjct: 11  FRRMFSISAFAPPPPAVPKPP-ADPNTNLFVSGLSKRTTTEGLREAFAKFGEVVHARVVT 69

Query: 290 DRVSGYSKGFGFVQYGTIGEAEAGIKGMDGQFLDGWVIFAEY 415
           DRVSGYSKGFGFV+Y T+ +A  GIKGMDG+FLDGWVIFAEY
Sbjct: 70  DRVSGYSKGFGFVKYATLEDAAEGIKGMDGKFLDGWVIFAEY 111


>ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297310180|gb|EFH40604.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 156

 Score =  150 bits (379), Expect = 1e-34
 Identities = 75/106 (70%), Positives = 86/106 (81%), Gaps = 2/106 (1%)
 Frame = +2

Query: 104 RVFCSSFSSFPFNLPQKNVEKP--PPAEPSTNLFVSGLSKRTTTEGLRDAFAKFGQVVHA 277
           R+FCS+ S F F  PQ   + P  P AEPSTNLFVSGLSKRTT+EGLR AFA+FG+V  A
Sbjct: 26  RLFCSNASRFSFLSPQAESQTPARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADA 85

Query: 278 KVVTDRVSGYSKGFGFVQYGTIGEAEAGIKGMDGQFLDGWVIFAEY 415
           KVVTDRVSGYSKGFGFV+Y T+ ++  GI GMDG+FLDGWVIFAEY
Sbjct: 86  KVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWVIFAEY 131


>ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|9758950|dbj|BAB09337.1| unnamed protein product
           [Arabidopsis thaliana] gi|18175762|gb|AAL59923.1|
           unknown protein [Arabidopsis thaliana]
           gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis
           thaliana] gi|21553374|gb|AAM62467.1| unknown
           [Arabidopsis thaliana] gi|332009129|gb|AED96512.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 156

 Score =  150 bits (379), Expect = 1e-34
 Identities = 75/106 (70%), Positives = 86/106 (81%), Gaps = 2/106 (1%)
 Frame = +2

Query: 104 RVFCSSFSSFPFNLPQKNVEKP--PPAEPSTNLFVSGLSKRTTTEGLRDAFAKFGQVVHA 277
           R+FCS+ S F F  PQ   + P  P AEPSTNLFVSGLSKRTT+EGLR AFA+FG+V  A
Sbjct: 26  RLFCSNASRFSFLSPQAESQTPARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADA 85

Query: 278 KVVTDRVSGYSKGFGFVQYGTIGEAEAGIKGMDGQFLDGWVIFAEY 415
           KVVTDRVSGYSKGFGFV+Y T+ ++  GI GMDG+FLDGWVIFAEY
Sbjct: 86  KVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWVIFAEY 131


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