BLASTX nr result

ID: Scutellaria23_contig00017587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017587
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleop...   229   6e-58
ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|2...   226   9e-57
ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleop...   219   8e-55
ref|XP_003538972.1| PREDICTED: U11/U12 small nuclear ribonucleop...   219   1e-54
ref|XP_003537786.1| PREDICTED: U11/U12 small nuclear ribonucleop...   219   1e-54

>ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
           [Vitis vinifera] gi|302141700|emb|CBI18903.3| unnamed
           protein product [Vitis vinifera]
          Length = 176

 Score =  229 bits (585), Expect = 6e-58
 Identities = 108/162 (66%), Positives = 136/162 (83%)
 Frame = -3

Query: 700 VPEYNSSNVKKARLESALVALLADPLLSDVPKKPTLSDVDTLVNLELGSAMRITIRKLDT 521
           V  YNS+NVKKARL S L ALL DP+L+DVPK+PTLSDVDTL+NLELGSAMRI++ KLD+
Sbjct: 14  VGSYNSNNVKKARLHSTLTALLDDPILADVPKEPTLSDVDTLINLELGSAMRISVIKLDS 73

Query: 520 TSFEMAMMNSATVKDLKLAIKKKVNEMEESKMGHRHISWKHVWSNFCLSYHNEKLLDDSS 341
           TSF++A++NSATVKDLKLAIKKK+N+ME+SKMGHRHISWKHVW+NFCLSY+N+KL++D S
Sbjct: 74  TSFDVAVLNSATVKDLKLAIKKKINDMEQSKMGHRHISWKHVWANFCLSYYNDKLINDGS 133

Query: 340 SLQDYGIRNNSEVQFIPYVVXXXXXXXXXXXXXRIFRGLNSK 215
           +LQD+GI NNS+V F+P+++             R F GLN +
Sbjct: 134 ALQDFGIHNNSQVHFVPFIMSKGSQRHSRRRKHRFFHGLNKR 175


>ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|222843666|gb|EEE81213.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  226 bits (575), Expect = 9e-57
 Identities = 113/171 (66%), Positives = 138/171 (80%)
 Frame = -3

Query: 724 SNSTALNSVPEYNSSNVKKARLESALVALLADPLLSDVPKKPTLSDVDTLVNLELGSAMR 545
           S+S   + V  YNSSNVKKA+L+S L ALL DP+LSDVPKKPTLSDVDTL++LE+GSAMR
Sbjct: 3   SSSKGEDEVGGYNSSNVKKAKLQSTLAALLDDPILSDVPKKPTLSDVDTLISLEMGSAMR 62

Query: 544 ITIRKLDTTSFEMAMMNSATVKDLKLAIKKKVNEMEESKMGHRHISWKHVWSNFCLSYHN 365
           I+++KLD TSF++A+MNSATVKDLKLAIK+K+ EME+SKMGHRHISWK VW+NF LSYHN
Sbjct: 63  ISVQKLDGTSFDVALMNSATVKDLKLAIKRKLIEMEQSKMGHRHISWKKVWANFALSYHN 122

Query: 364 EKLLDDSSSLQDYGIRNNSEVQFIPYVVXXXXXXXXXXXXXRIFRGLNSKS 212
           +KLLDD+S+LQD GIRNNS+V F  YV+             R F GLN ++
Sbjct: 123 QKLLDDNSALQDSGIRNNSQVHFASYVMSKDSQRHSKRRKHRFFHGLNKRA 173


>ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 181

 Score =  219 bits (558), Expect = 8e-55
 Identities = 108/157 (68%), Positives = 129/157 (82%)
 Frame = -3

Query: 691 YNSSNVKKARLESALVALLADPLLSDVPKKPTLSDVDTLVNLELGSAMRITIRKLDTTSF 512
           Y+S+NVKK RL S L ALL DP+L+DVPK PTLS VDTL++LELGSAMRI++ KLD T+ 
Sbjct: 22  YHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISVLKLDGTAI 81

Query: 511 EMAMMNSATVKDLKLAIKKKVNEMEESKMGHRHISWKHVWSNFCLSYHNEKLLDDSSSLQ 332
           ++ +MNSAT+KDLKLAIKKKVNEME+SKMGHRHISWKHVW+NFCL++ NEKLLDDSS LQ
Sbjct: 82  DVVIMNSATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLNEKLLDDSSVLQ 141

Query: 331 DYGIRNNSEVQFIPYVVXXXXXXXXXXXXXRIFRGLN 221
           D+GIRNNS+V+FIPYV+             R F GLN
Sbjct: 142 DFGIRNNSQVRFIPYVMSKSSRTHSRRRKHRFFHGLN 178


>ref|XP_003538972.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Glycine max]
          Length = 187

 Score =  219 bits (557), Expect = 1e-54
 Identities = 105/164 (64%), Positives = 130/164 (79%)
 Frame = -3

Query: 703 SVPEYNSSNVKKARLESALVALLADPLLSDVPKKPTLSDVDTLVNLELGSAMRITIRKLD 524
           ++ EYN S+VKKARL S L  LL DP+LSDVPK PT +DVDTL+NLELGSAMRI++ KLD
Sbjct: 24  NMEEYNKSSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGSAMRISVLKLD 83

Query: 523 TTSFEMAMMNSATVKDLKLAIKKKVNEMEESKMGHRHISWKHVWSNFCLSYHNEKLLDDS 344
            T+ ++ +MNSATVKDLKLAIKKKVN+ME+S MGHRHISWKHVW+N+CLS HN KLLDD+
Sbjct: 84  GTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLSCHNNKLLDDN 143

Query: 343 SSLQDYGIRNNSEVQFIPYVVXXXXXXXXXXXXXRIFRGLNSKS 212
            +LQ++G+RNNS+VQF+ YV+             R F GLN +S
Sbjct: 144 EALQNFGVRNNSQVQFVSYVMTKESRRHSKRRKHRFFHGLNKRS 187


>ref|XP_003537786.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like isoform 2 [Glycine max]
          Length = 190

 Score =  219 bits (557), Expect = 1e-54
 Identities = 105/164 (64%), Positives = 130/164 (79%)
 Frame = -3

Query: 703 SVPEYNSSNVKKARLESALVALLADPLLSDVPKKPTLSDVDTLVNLELGSAMRITIRKLD 524
           ++ EYN S+VKKARL S L  LL DP+LSDVPK PT +DVDTL+NLELGSAMRI++ KLD
Sbjct: 27  NMEEYNKSSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGSAMRISVLKLD 86

Query: 523 TTSFEMAMMNSATVKDLKLAIKKKVNEMEESKMGHRHISWKHVWSNFCLSYHNEKLLDDS 344
            T+ ++ +MNSATVKDLKLAIKKKVN+ME+S MGHRHISWKHVW+N+CLS HN KLLDD+
Sbjct: 87  GTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLSCHNNKLLDDN 146

Query: 343 SSLQDYGIRNNSEVQFIPYVVXXXXXXXXXXXXXRIFRGLNSKS 212
            +LQ++G+RNNS+VQF+ YV+             R F GLN +S
Sbjct: 147 EALQNFGVRNNSQVQFVSYVMTKESRRHSKRRKHRFFHGLNKRS 190


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