BLASTX nr result

ID: Scutellaria23_contig00017572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017572
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527063.1| dead box ATP-dependent RNA helicase, putativ...   154   9e-36
emb|CBI16498.3| unnamed protein product [Vitis vinifera]              148   4e-34
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   148   4e-34
ref|XP_002297644.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   139   3e-31

>ref|XP_002527063.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533568|gb|EEF35307.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 650

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/128 (60%), Positives = 89/128 (69%)
 Frame = -3

Query: 385 TDPAPAPVSHSGAAAGNGHMGYGGFPSVGPWNXXXXXXXXXXXXXXXXVWNNRNSGYDRG 206
           +DP PAP ++SG +  N   G+GG    GP N                 W  R+ G+DRG
Sbjct: 83  SDP-PAP-AYSGPSLSNDRQGHGGSRGGGPRNDFRSGYGAGGGGGRGSNWGTRSGGWDRG 140

Query: 205 RQREANPFQGDVDAEQVFGSQDNTGINFDAYEDIPVETSGANVPPPVNTFAEIDLGEALN 26
           R+RE NPF  D+D+EQVF  Q++TGINFDAYEDIPVETSG NVPPPVNTFAEIDLGEALN
Sbjct: 141 REREVNPFGDDIDSEQVFTEQESTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALN 200

Query: 25  LNIRRCKY 2
           LNIRRCKY
Sbjct: 201 LNIRRCKY 208


>emb|CBI16498.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  148 bits (374), Expect = 4e-34
 Identities = 76/126 (60%), Positives = 86/126 (68%)
 Frame = -3

Query: 379 PAPAPVSHSGAAAGNGHMGYGGFPSVGPWNXXXXXXXXXXXXXXXXVWNNRNSGYDRGRQ 200
           PAPA   +SG ++ N   GY G    GP N                 WNN++ G+DRGR+
Sbjct: 53  PAPA---YSGPSSANDRSGYSGNRWGGPRNDSNQTGYSSGGRTGG--WNNKSGGWDRGRE 107

Query: 199 REANPFQGDVDAEQVFGSQDNTGINFDAYEDIPVETSGANVPPPVNTFAEIDLGEALNLN 20
           RE NPF  DVD E+VF  Q+NTGINFDAYEDIPVETSG NVPPPVNTFAEIDLGEALN N
Sbjct: 108 REVNPFGDDVDTEKVFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQN 167

Query: 19  IRRCKY 2
           I+RCKY
Sbjct: 168 IKRCKY 173


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
           gi|147854540|emb|CAN78578.1| hypothetical protein
           VITISV_013679 [Vitis vinifera]
          Length = 612

 Score =  148 bits (374), Expect = 4e-34
 Identities = 76/126 (60%), Positives = 86/126 (68%)
 Frame = -3

Query: 379 PAPAPVSHSGAAAGNGHMGYGGFPSVGPWNXXXXXXXXXXXXXXXXVWNNRNSGYDRGRQ 200
           PAPA   +SG ++ N   GY G    GP N                 WNN++ G+DRGR+
Sbjct: 53  PAPA---YSGPSSANDRSGYSGNRWGGPRNDSNQTGYSSGGRTGG--WNNKSGGWDRGRE 107

Query: 199 REANPFQGDVDAEQVFGSQDNTGINFDAYEDIPVETSGANVPPPVNTFAEIDLGEALNLN 20
           RE NPF  DVD E+VF  Q+NTGINFDAYEDIPVETSG NVPPPVNTFAEIDLGEALN N
Sbjct: 108 REVNPFGDDVDTEKVFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQN 167

Query: 19  IRRCKY 2
           I+RCKY
Sbjct: 168 IKRCKY 173


>ref|XP_002297644.1| predicted protein [Populus trichocarpa] gi|222844902|gb|EEE82449.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  141 bits (356), Expect = 5e-32
 Identities = 75/125 (60%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
 Frame = -3

Query: 373 PAPVSHSGAAAGNGHMGYGGFPSVG-PWNXXXXXXXXXXXXXXXXVWNNRNSGYDRGRQR 197
           P   +HSG  + N H GYGG    G P N                 W NR  G+DRGR+R
Sbjct: 20  PPAAAHSGPVSSNDHSGYGGGSRSGVPRNDFRGGYGGSGGRSGG--WGNRG-GWDRGRER 76

Query: 196 EANPFQGDVDAEQVFGSQDNTGINFDAYEDIPVETSGANVPPPVNTFAEIDLGEALNLNI 17
           E NPF  D + EQ F  Q+NTGINFDAYEDIPVETSG NVPP VNTFAEIDLGEALNLNI
Sbjct: 77  EVNPFGDDDETEQPFSEQENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNI 136

Query: 16  RRCKY 2
           RRCKY
Sbjct: 137 RRCKY 141


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 619

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/129 (56%), Positives = 86/129 (66%), Gaps = 3/129 (2%)
 Frame = -3

Query: 379 PAPAPVSHSGAAAGNGHM---GYGGFPSVGPWNXXXXXXXXXXXXXXXXVWNNRNSGYDR 209
           PAPAP ++SG ++G G     G  G     P N                 W N++ G+DR
Sbjct: 54  PAPAP-AYSGPSSGAGSSSGAGNSGSRYAAPRNDYRPGYGGGGGRTGG--WGNKSGGWDR 110

Query: 208 GRQREANPFQGDVDAEQVFGSQDNTGINFDAYEDIPVETSGANVPPPVNTFAEIDLGEAL 29
           GR+RE NPF+ + +AE+ F  Q+NTGINFDAYEDIPVETSG NVPPPVNTFAEIDLGEAL
Sbjct: 111 GREREVNPFEEEDNAEEAFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEAL 170

Query: 28  NLNIRRCKY 2
           N NIRRCKY
Sbjct: 171 NQNIRRCKY 179


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