BLASTX nr result

ID: Scutellaria23_contig00017545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017545
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191162.2| pentatricopeptide repeat-containing protein [Ar...    57   1e-06
emb|CAB87857.1| putative protein [Arabidopsis thaliana] gi|26450...    57   1e-06
emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]    56   3e-06
ref|XP_002876347.1| hypothetical protein ARALYDRAFT_486042 [Arab...    56   3e-06
ref|XP_002879856.1| pentatricopeptide repeat-containing protein ...    55   5e-06

>ref|NP_191162.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546756|sp|Q9LY43.2|PP283_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g56030 gi|332645947|gb|AEE79468.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 351

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/60 (48%), Positives = 41/60 (68%)
 Frame = +3

Query: 3   IKEMVESGYYKQASDFVRIFAGKNEKLDVELYGFVVRKLKSLKRLEQAKLVVGEMTTTGL 182
           I EMVESGYY  + +FV  +AGK+++LD E  G +  KL   KR ++AK+V+ EM+  GL
Sbjct: 275 IGEMVESGYYALSVEFVMAYAGKDKRLDEENLGSLASKLIKRKRFKEAKMVLKEMSVRGL 334


>emb|CAB87857.1| putative protein [Arabidopsis thaliana] gi|26450191|dbj|BAC42214.1|
           unknown protein [Arabidopsis thaliana]
           gi|114050667|gb|ABI49483.1| At3g56030 [Arabidopsis
           thaliana]
          Length = 336

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/60 (48%), Positives = 41/60 (68%)
 Frame = +3

Query: 3   IKEMVESGYYKQASDFVRIFAGKNEKLDVELYGFVVRKLKSLKRLEQAKLVVGEMTTTGL 182
           I EMVESGYY  + +FV  +AGK+++LD E  G +  KL   KR ++AK+V+ EM+  GL
Sbjct: 260 IGEMVESGYYALSVEFVMAYAGKDKRLDEENLGSLASKLIKRKRFKEAKMVLKEMSVRGL 319


>emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]
          Length = 330

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/60 (46%), Positives = 41/60 (68%)
 Frame = +3

Query: 3   IKEMVESGYYKQASDFVRIFAGKNEKLDVELYGFVVRKLKSLKRLEQAKLVVGEMTTTGL 182
           I  +++ GYY QA +FV I  GK++KLD E +G +  +L +LKR E+AKLV+ EM   G+
Sbjct: 252 INGLLKLGYYAQAVEFVMICGGKDKKLDEESFGILGSRLINLKRFEEAKLVLKEMRRRGI 311


>ref|XP_002876347.1| hypothetical protein ARALYDRAFT_486042 [Arabidopsis lyrata subsp.
           lyrata] gi|297322185|gb|EFH52606.1| hypothetical protein
           ARALYDRAFT_486042 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/60 (46%), Positives = 41/60 (68%)
 Frame = +3

Query: 3   IKEMVESGYYKQASDFVRIFAGKNEKLDVELYGFVVRKLKSLKRLEQAKLVVGEMTTTGL 182
           I E++ESGYY  + +FV  +AGK+++LD E  G +  KL   KR ++AKLV+ EM+  GL
Sbjct: 258 IGELLESGYYALSVEFVMAYAGKDKRLDEENLGSLASKLIKRKRFKEAKLVLKEMSVRGL 317


>ref|XP_002879856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325695|gb|EFH56115.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 338

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = +3

Query: 3   IKEMVESGYYKQASDFVRIFAGKNEKLDVELYGFVVRKLKSLKRLEQAKLVVGEMTTTGL 182
           I  +VE GYY    +FV  +AGK+  LD E +GF+  KL   KR E+AK+VV EM   GL
Sbjct: 254 IAGLVEGGYYALGLEFVMAYAGKDLGLDGESFGFLAGKLVKRKRFEEAKIVVKEMVMRGL 313


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