BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017302
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...   164   9e-39
ref|NP_191302.2| pentatricopeptide repeat-containing protein [Ar...   159   3e-37
gb|AAP40452.1| unknown protein [Arabidopsis thaliana]                 159   3e-37
ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab...   158   5e-37

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  182 bits (462), Expect = 2e-44
 Identities = 94/149 (63%), Positives = 111/149 (74%), Gaps = 6/149 (4%)
 Frame = +1

Query: 73  PLIGKTPE-----TRSKYSWVESLRSETRSNSFREAITTYIQMQATGVPPDNFAFPAVLK 237
           PL  KTP      +RS  SWV++LRS TRSN FREAI+TYI+M  +G  PDNFAFPAVLK
Sbjct: 41  PLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLK 100

Query: 238 AATALQDLHLGQQIHGSVVKLGYDSHS-TVCNTILHMYAQCGTDVGQVFKVFDRIPQRDQ 414
           A + LQDL  G+QIH + VK GY S S TV NT+++MY +CG  +G V KVFDRI  RDQ
Sbjct: 101 AVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCG-GIGDVCKVFDRITDRDQ 159

Query: 415 VSWNSFINALCKYEKWELALEAFRLMGLE 501
           VSWNSFI ALC++EKWE ALEAFR M +E
Sbjct: 160 VSWNSFIAALCRFEKWEQALEAFRAMQME 188



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
 Frame = +1

Query: 100 RSKYSWVESLRSETRSNSFREAITTYIQMQATGVPPDNFAFPAVLKAATALQDLH---LG 270
           R + SW   + +  R   + +A+  +  MQ   +   +F   +V  A + L  +H   LG
Sbjct: 157 RDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLG 216

Query: 271 QQIHGSVVKLGYDSHSTVCNTILHMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCK 450
           +Q+HG  +++G D  +   N ++ MYA+ G  V     +F+    RD VSWN+ I++  +
Sbjct: 217 KQLHGYSLRVG-DQKTFTNNALMAMYAKLGR-VDDSKALFESFVDRDMVSWNTMISSFSQ 274

Query: 451 YEKWELALEAFRLMGLE 501
            +++  AL  FRLM LE
Sbjct: 275 SDRFSEALAFFRLMVLE 291


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score =  164 bits (414), Expect = 9e-39
 Identities = 84/158 (53%), Positives = 114/158 (72%), Gaps = 9/158 (5%)
 Frame = +1

Query: 58  QTHNRP---LIGKTP-----ETRSKYSWVESLRSETRSNSFREAITTYIQMQATGVPPDN 213
           QTH  P    +  +P     ++RS+ SW+ESLR  TRSN FREAI+TY+ M  +GV PD+
Sbjct: 18  QTHELPTKKFLSHSPPKPISQSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDS 77

Query: 214 FAFPAVLKAATALQDLHLGQQIHGSVVKLGYDSHST-VCNTILHMYAQCGTDVGQVFKVF 390
           +AFP VLKA T LQDL+LG+QIH  VVK GY+S S  + N++++ Y +C +++  V+KVF
Sbjct: 78  YAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSLVNFYGKC-SELDDVYKVF 136

Query: 391 DRIPQRDQVSWNSFINALCKYEKWELALEAFRLMGLEE 504
           DRI +RD VSWNS I+A C+ ++WELALEAFR M  E+
Sbjct: 137 DRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAED 174



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
 Frame = +1

Query: 94  ETRSKYSWVESLRSETRSNSFREAITTYIQMQATGVPPDNFAFPAVLKAATALQDLHLGQ 273
           E R+  SW   + S +++  F EA+ +   M   GV PD     +VL A + L+ L  G+
Sbjct: 243 EDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGK 302

Query: 274 QIHGSVVKLG-YDSHSTVCNTILHMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCK 450
           +IH   ++ G    +S V + ++ MY  CG  VG   +VFD I +R    WN+ I    +
Sbjct: 303 EIHAYALRSGDLIENSFVGSALVDMYCNCG-QVGSGRRVFDGILERKTGLWNAMIAGYAQ 361

Query: 451 YEKWELALEAF 483
            E  E AL  F
Sbjct: 362 NEHDEKALMLF 372



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
 Frame = +1

Query: 100 RSKYSWVESLRSETRSNSFREAITTYIQMQATGVPPDNFAFPAVLKAATAL---QDLHLG 270
           R   SW   + +  R+  +  A+  +  M A  + P +F   + + A + L   + L LG
Sbjct: 142 RDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLG 201

Query: 271 QQIHGSVVKLGYDSHSTVCNTILHMYAQCG--TDVGQVFKVFDRIPQRDQVSWNSFINAL 444
           +QIHG   + G+ S  T  N ++ MYA  G   D   +FK+F+    R+ +SWN+ I++ 
Sbjct: 202 KQIHGYCFRNGHWSTFT-NNALMTMYANLGRLDDAKFLFKLFE---DRNLISWNTMISSF 257

Query: 445 CKYEKWELALEAFRLMGLE 501
            + E++  AL + R M LE
Sbjct: 258 SQNERFVEALMSLRYMVLE 276


>ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
           gi|332646133|gb|AEE79654.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/134 (56%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
 Frame = +1

Query: 94  ETRSKYSWVESLRSETRSNSFREAITTYIQMQATGVPPDNFAFPAVLKAATALQDLHLGQ 273
           ++RS   W++ LRS+ RSN  REA+ TY+ M   G+ PDN+AFPA+LKA   LQD+ LG+
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 274 QIHGSVVKLGYDSHS-TVCNTILHMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCK 450
           QIH  V K GY   S TV NT++++Y +CG D G V+KVFDRI +R+QVSWNS I++LC 
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCS 176

Query: 451 YEKWELALEAFRLM 492
           +EKWE+ALEAFR M
Sbjct: 177 FEKWEMALEAFRCM 190



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
 Frame = +1

Query: 94  ETRSKYSWVESLRSETRSNSFREAITTYIQMQ-----------ATGVPPDNFAFPAVLKA 240
           E R   +W   +     S    +A+    +MQ              + P++     +L +
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526

Query: 241 ATALQDLHLGQQIHGSVVKLGYDSHSTVCNTILHMYAQCGTDVGQVFKVFDRIPQRDQVS 420
             AL  L  G++IH   +K    +   V + ++ MYA+CG  +    KVFD+IPQ++ ++
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC-LQMSRKVFDQIPQKNVIT 585

Query: 421 WNSFINALCKYEKWELALEAFRLM 492
           WN  I A   +   + A++  R+M
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMM 609



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = +1

Query: 100 RSKYSWVESLRSETRSNSFREAITTYIQMQATGVPPDNFAFPAVLKAATALQDLHLGQQI 279
           R   +W   L S  ++    EA+    +M   GV PD F   +VL A + L+ L  G+++
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324

Query: 280 HGSVVKLG-YDSHSTVCNTILHMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCKYE 456
           H   +K G  D +S V + ++ MY  C   V    +VFD +  R    WN+ I    + E
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNC-KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 383

Query: 457 KWELALEAFRLMGLEE 504
             + AL  F  +G+EE
Sbjct: 384 HDKEALLLF--IGMEE 397


>gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/134 (56%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
 Frame = +1

Query: 94  ETRSKYSWVESLRSETRSNSFREAITTYIQMQATGVPPDNFAFPAVLKAATALQDLHLGQ 273
           ++RS   W++ LRS+ RSN  REA+ TY+ M   G+ PDN+AFPA+LKA   LQD+ LG+
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 274 QIHGSVVKLGYDSHS-TVCNTILHMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCK 450
           QIH  V K GY   S TV NT++++Y +CG D G V+KVFDRI +R+QVSWNS I++LC 
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCS 176

Query: 451 YEKWELALEAFRLM 492
           +EKWE+ALEAFR M
Sbjct: 177 FEKWEMALEAFRCM 190



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
 Frame = +1

Query: 94  ETRSKYSWVESLRSETRSNSFREAITTYIQMQ-----------ATGVPPDNFAFPAVLKA 240
           E R   +W   +     S    +A+    +MQ              + P++     +L +
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526

Query: 241 ATALQDLHLGQQIHGSVVKLGYDSHSTVCNTILHMYAQCGTDVGQVFKVFDRIPQRDQVS 420
             AL  L  G++IH   +K    +   V + ++ MYA+CG  +    KVFD+IPQ++ ++
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC-LQMSRKVFDQIPQKNVIT 585

Query: 421 WNSFINALCKYEKWELALEAFRLM 492
           WN  I A   +   + A++  R+M
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMM 609



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = +1

Query: 100 RSKYSWVESLRSETRSNSFREAITTYIQMQATGVPPDNFAFPAVLKAATALQDLHLGQQI 279
           R   +W   L S  ++    EA+    +M   GV PD F   +VL A + L+ L  G+++
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324

Query: 280 HGSVVKLG-YDSHSTVCNTILHMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCKYE 456
           H   +K G  D +S V + ++ MY  C   V    +VFD +  R    WN+ I    + E
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNC-KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 383

Query: 457 KWELALEAFRLMGLEE 504
             + AL  F  +G+EE
Sbjct: 384 HDKEALLLF--IGMEE 397


>ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein
           ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata]
          Length = 886

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/134 (57%), Positives = 99/134 (73%), Gaps = 1/134 (0%)
 Frame = +1

Query: 94  ETRSKYSWVESLRSETRSNSFREAITTYIQMQATGVPPDNFAFPAVLKAATALQDLHLGQ 273
           ++ S   W++ LRS+ RSN  REA+ TYI M   G+ PDNFAFPA+LKA   LQD+ LG+
Sbjct: 54  QSHSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGK 113

Query: 274 QIHGSVVKLGYDSHS-TVCNTILHMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCK 450
           QIH  V K GY   S TV NT++++Y +CG D G V+KVFDRI +R+QVSWNS I++LC 
Sbjct: 114 QIHAHVYKFGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCS 172

Query: 451 YEKWELALEAFRLM 492
           +EKWE+ALEAFR M
Sbjct: 173 FEKWEMALEAFRCM 186



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
 Frame = +1

Query: 94  ETRSKYSWVESLRSETRSNSFREAITTYIQMQATGVPPDNFAFPAVLKAATALQDLHLGQ 273
           E R   +W   L S  ++  F EA+    +M   GV PD F   +VL A + L+ L  G+
Sbjct: 259 EGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGK 318

Query: 274 QIHGSVVKLG-YDSHSTVCNTILHMYAQCGTDVGQVFKVFDRIPQRDQVSWNSFINALCK 450
           ++H   +K G  D +S V + ++ MY  C   V    +VFD +  R    WN+ I    +
Sbjct: 319 ELHAYALKNGSLDENSFVGSALVDMYCNC-KQVLSGCRVFDGMFDRKIGLWNAMITGYAQ 377

Query: 451 YEKWELALEAF 483
            E  E AL  F
Sbjct: 378 NEYDEEALLLF 388