BLASTX nr result

ID: Scutellaria23_contig00017283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017283
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302121.1| predicted protein [Populus trichocarpa] gi|1...   192   6e-47
ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein S...   191   8e-47
emb|CBI32365.3| unnamed protein product [Vitis vinifera]              191   1e-46
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S...   191   1e-46
ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putat...   191   1e-46

>ref|XP_002302121.1| predicted protein [Populus trichocarpa] gi|118482633|gb|ABK93236.1|
           unknown [Populus trichocarpa]
           gi|118488779|gb|ABK96200.1| unknown [Populus
           trichocarpa] gi|222843847|gb|EEE81394.1| predicted
           protein [Populus trichocarpa]
          Length = 115

 Score =  192 bits (487), Expect = 6e-47
 Identities = 95/98 (96%), Positives = 98/98 (100%)
 Frame = +3

Query: 96  MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSV 275
           MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLT+KGKNPVT+DHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTVKGKNPVTLDHLSV 60

Query: 276 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAV 389
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRA+
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAL 98


>ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Vitis
           vinifera]
          Length = 114

 Score =  191 bits (486), Expect = 8e-47
 Identities = 95/96 (98%), Positives = 96/96 (100%)
 Frame = +3

Query: 96  MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSV 275
           MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSV 60

Query: 276 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 383
           RGNNIRYYILPDS+NLETLLVEETPRVKPKKPTAGR
Sbjct: 61  RGNNIRYYILPDSINLETLLVEETPRVKPKKPTAGR 96


>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  191 bits (485), Expect = 1e-46
 Identities = 95/96 (98%), Positives = 96/96 (100%)
 Frame = +3

Query: 96  MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSV 275
           MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT+DHLSV
Sbjct: 31  MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 90

Query: 276 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 383
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 91  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 126


>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Vitis vinifera] gi|225436988|ref|XP_002277231.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Vitis vinifera]
          Length = 114

 Score =  191 bits (485), Expect = 1e-46
 Identities = 95/96 (98%), Positives = 96/96 (100%)
 Frame = +3

Query: 96  MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSV 275
           MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT+DHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 276 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 383
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 96


>ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus communis]
           gi|223540149|gb|EEF41726.1| small nuclear
           ribonucleoprotein sm d1, putative [Ricinus communis]
          Length = 114

 Score =  191 bits (484), Expect = 1e-46
 Identities = 94/96 (97%), Positives = 96/96 (100%)
 Frame = +3

Query: 96  MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSV 275
           MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKLTLKGKNPVT+DHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 276 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 383
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 96


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