BLASTX nr result

ID: Scutellaria23_contig00017070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017070
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...   189   1e-45
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...   188   2e-45
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...   187   3e-45
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|1...   187   6e-45
ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arab...   185   2e-44

>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  189 bits (480), Expect = 1e-45
 Identities = 96/128 (75%), Positives = 106/128 (82%)
 Frame = -1

Query: 770 MSWAGPEDVYLSTSLAGYLDKKIXXXXXXXXXXXXXXRSFDQFANAVLEGACERIIVGDL 591
           MSWAGPED+YLSTSLA YLDKK+              RSFDQFANAVLEGACER+IVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 590 YCDIPLGLYVIRGENVVLIGELDPLKQELPQTMTLVSEAEIRQAQKVEREASELKGTMKK 411
           YCDIPLGLYVIRGENVVLIGELD  K+ELP  MT VS AEI++AQK EREAS+LKGTM+K
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120

Query: 410 RMDFLDMD 387
           RM+FLD+D
Sbjct: 121 RMEFLDLD 128


>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
          Length = 128

 Score =  188 bits (478), Expect = 2e-45
 Identities = 95/128 (74%), Positives = 106/128 (82%)
 Frame = -1

Query: 770 MSWAGPEDVYLSTSLAGYLDKKIXXXXXXXXXXXXXXRSFDQFANAVLEGACERIIVGDL 591
           MSWAGPED+YLSTSLA YLDKK+              RSFDQFANAVLEGACER+IVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 590 YCDIPLGLYVIRGENVVLIGELDPLKQELPQTMTLVSEAEIRQAQKVEREASELKGTMKK 411
           YCDIPLGLYVIRGENVVLIGELD  ++ELP+ MT VS AEI++AQK EREAS+LKGTM+K
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120

Query: 410 RMDFLDMD 387
           RM+FLD D
Sbjct: 121 RMEFLDFD 128


>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  187 bits (476), Expect = 3e-45
 Identities = 94/128 (73%), Positives = 106/128 (82%)
 Frame = -1

Query: 770 MSWAGPEDVYLSTSLAGYLDKKIXXXXXXXXXXXXXXRSFDQFANAVLEGACERIIVGDL 591
           MSWAGPED+YLSTSLA YLDKK+              RSFDQFANAVLEGACER+IVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 590 YCDIPLGLYVIRGENVVLIGELDPLKQELPQTMTLVSEAEIRQAQKVEREASELKGTMKK 411
           YCDIPLGLY+IRGENVVLIGELD  K+ELP  MT VS AEIR+AQK ER+A++LKGTM+K
Sbjct: 61  YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120

Query: 410 RMDFLDMD 387
           RM+FLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|118489961|gb|ABK96777.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222873302|gb|EEF10433.1| predicted protein [Populus
           trichocarpa]
          Length = 128

 Score =  187 bits (474), Expect = 6e-45
 Identities = 95/128 (74%), Positives = 106/128 (82%)
 Frame = -1

Query: 770 MSWAGPEDVYLSTSLAGYLDKKIXXXXXXXXXXXXXXRSFDQFANAVLEGACERIIVGDL 591
           MSWAGPED+YLSTSLA YLDKK+              RSFDQFANAVLEGACER+IVGDL
Sbjct: 1   MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60

Query: 590 YCDIPLGLYVIRGENVVLIGELDPLKQELPQTMTLVSEAEIRQAQKVEREASELKGTMKK 411
           YCDI LGLYVIRGENVVLIGELD  ++ELP  MT VSEAEIR+AQK EREA++LKGTM+K
Sbjct: 61  YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120

Query: 410 RMDFLDMD 387
           RM+FLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
           lyrata] gi|297328707|gb|EFH59126.1| hypothetical protein
           ARALYDRAFT_478821 [Arabidopsis lyrata subsp. lyrata]
          Length = 128

 Score =  185 bits (470), Expect = 2e-44
 Identities = 93/128 (72%), Positives = 105/128 (82%)
 Frame = -1

Query: 770 MSWAGPEDVYLSTSLAGYLDKKIXXXXXXXXXXXXXXRSFDQFANAVLEGACERIIVGDL 591
           MSWAGPED+YLSTSLA YLD+K+              RSFDQFANAVLEGACER+IVG+ 
Sbjct: 1   MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60

Query: 590 YCDIPLGLYVIRGENVVLIGELDPLKQELPQTMTLVSEAEIRQAQKVEREASELKGTMKK 411
           YCDIPLGLYVIRGENVVLIGELD  ++ELP  M  VSEAEI++AQKVEREASEL+GTM+K
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDTEREELPPNMIRVSEAEIKRAQKVEREASELRGTMRK 120

Query: 410 RMDFLDMD 387
           RM+FLD D
Sbjct: 121 RMEFLDFD 128


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