BLASTX nr result

ID: Scutellaria23_contig00017029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00017029
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71273.1| 60S ribosomal protein L10B [Hevea brasiliensis]         56   8e-06
gb|AFK38655.1| unknown [Lotus japonicus]                               56   8e-06
ref|NP_001234751.1| 60S ribosomal protein L10 [Solanum lycopersi...    56   1e-05
gb|ACT65738.1| QM [Nicotiana benthamiana]                              56   1e-05
ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis ...    56   1e-05

>gb|ADR71273.1| 60S ribosomal protein L10B [Hevea brasiliensis]
          Length = 220

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 41/103 (39%), Positives = 47/103 (45%), Gaps = 34/103 (33%)
 Frame = -1

Query: 571 SGKDAFHLRVRVC-IPSISFRSIKCWC*ADRLQTGMRDAYG*PQGGLAR----------- 428
           +GKDAFHLRVRV     +    +     ADRLQTGMR A+G PQG  AR           
Sbjct: 80  AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVR 139

Query: 427 ----------------------RQKIIVSRKWGLIKCSLTEMV 365
                                 RQKIIVSRKWG  K + T+ V
Sbjct: 140 CKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYV 182


>gb|AFK38655.1| unknown [Lotus japonicus]
          Length = 223

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 41/101 (40%), Positives = 46/101 (45%), Gaps = 34/101 (33%)
 Frame = -1

Query: 571 SGKDAFHLRVRVC-IPSISFRSIKCWC*ADRLQTGMRDAYG*PQGGLAR----------- 428
           +GKDAFHLRVRV     +    +     ADRLQTGMR A+G PQG  AR           
Sbjct: 80  AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVR 139

Query: 427 ----------------------RQKIIVSRKWGLIKCSLTE 371
                                 RQKIIVSRKWG  K S T+
Sbjct: 140 CKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180


>ref|NP_001234751.1| 60S ribosomal protein L10 [Solanum lycopersicum]
           gi|68449756|gb|AAY97865.1| 60S ribosomal protein L10
           [Solanum lycopersicum]
          Length = 220

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 41/101 (40%), Positives = 46/101 (45%), Gaps = 34/101 (33%)
 Frame = -1

Query: 571 SGKDAFHLRVRVC-IPSISFRSIKCWC*ADRLQTGMRDAYG*PQGGLAR----------- 428
           +GKDAFHLRVRV     +    +     ADRLQTGMR A+G PQG  AR           
Sbjct: 80  AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVR 139

Query: 427 ----------------------RQKIIVSRKWGLIKCSLTE 371
                                 RQKIIVSRKWG  K S T+
Sbjct: 140 CKDGNANHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180


>gb|ACT65738.1| QM [Nicotiana benthamiana]
          Length = 221

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 41/101 (40%), Positives = 46/101 (45%), Gaps = 34/101 (33%)
 Frame = -1

Query: 571 SGKDAFHLRVRVC-IPSISFRSIKCWC*ADRLQTGMRDAYG*PQGGLAR----------- 428
           +GKDAFHLRVRV     +    +     ADRLQTGMR A+G PQG  AR           
Sbjct: 80  AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVR 139

Query: 427 ----------------------RQKIIVSRKWGLIKCSLTE 371
                                 RQKIIVSRKWG  K S T+
Sbjct: 140 CKDGNANHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180


>ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis vinifera]
           gi|297745742|emb|CBI15798.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 40/103 (38%), Positives = 47/103 (45%), Gaps = 34/103 (33%)
 Frame = -1

Query: 571 SGKDAFHLRVRVC-IPSISFRSIKCWC*ADRLQTGMRDAYG*PQGGLAR----------- 428
           +GKDAFHLRVRV     +    +     ADRLQTGMR A+G PQG  AR           
Sbjct: 80  AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVR 139

Query: 427 ----------------------RQKIIVSRKWGLIKCSLTEMV 365
                                 RQKIIVSRKWG  K + T+ +
Sbjct: 140 CKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYI 182


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