BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016888
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vi...   252   1e-64
ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...   252   1e-64
emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]   252   1e-64
ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidops...   250   4e-64
ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis ...   250   4e-64

>ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
          Length = 398

 Score =  252 bits (644), Expect = 1e-64
 Identities = 140/239 (58%), Positives = 164/239 (68%), Gaps = 6/239 (2%)
 Frame = +2

Query: 518  DRSMWLKLRHSQATPTHLHHHQRWPN---NGSTEVFQREMLQLEAMFTKLSPMAQPYVXX 688
            DRS  + +++ Q  P    H     +   NG + V  RE   L+ +F+KL+PMA+ +V  
Sbjct: 99   DRSQKIGVQNMQVGPVAAQHRSNGGHLQRNGDSGVDMRE---LQELFSKLNPMAEEFVPP 155

Query: 689  XXXXXXXXXXXXXXYAVNNIAAANDMHLNAFANNNENTGQ---RWKKNGYDQGKRKMSGR 859
                             NN          +  +NN   GQ   R KKN + QGKR+M+ R
Sbjct: 156  SL--------------ANNGLNGGFYSNGSETHNNTRNGQVNGRRKKNNFGQGKRRMNSR 201

Query: 860  TSVAQREEIIRRTVYVSDIDHQVTEEQLAALFIGCGQVVDCRVCGDPNSILRFAFVEFTD 1039
            TS+AQREEIIRRTVYVSDID QVTEE+LAALFI CGQVVDCRVCGDPNS+LRFAFVEFTD
Sbjct: 202  TSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTD 261

Query: 1040 EEAAHAALALSGTMLGYYPVRVLPSKTAIAPVNPTFLPQTLDEREMCARTVYVTNIDKK 1216
            EE A AAL+L+GTMLGYYPVRVLPSKTAIAPVNPTFLP+  DEREMCART+Y TNIDKK
Sbjct: 262  EEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKK 320



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +2

Query: 881  EIIRRTVYVSDIDHQVTEEQLAALFIG-CGQVVDCRVCGDPNSILRFAFVEFTDEEAAHA 1057
            E+  RT+Y ++ID +V++  +   F   CG+V   R+ GD +   R AFVEF   E+A A
Sbjct: 306  EMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIA 365

Query: 1058 ALALSGTMLGYYPVRVLPSKTAIAPVNP 1141
            AL  SG +LG  P+RV PSKT + P  P
Sbjct: 366  ALNCSGVVLGSLPIRVSPSKTPVRPRAP 393


>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
            gi|223541913|gb|EEF43459.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 379

 Score =  252 bits (644), Expect = 1e-64
 Identities = 132/223 (59%), Positives = 156/223 (69%), Gaps = 8/223 (3%)
 Frame = +2

Query: 572  HHHQRWPNNGSTEVFQREMLQLEAMFTKLSPMAQPYVXXXXXXXXXXXXXXXX------- 730
            HHHQR    G     QR++ +L+ +F+KL+PMA+ +V                       
Sbjct: 82   HHHQRSSGGGD---LQRDIRELQELFSKLNPMAEEFVPPSLANNKISNNYIHGLNGLNVG 138

Query: 731  -YAVNNIAAANDMHLNAFANNNENTGQRWKKNGYDQGKRKMSGRTSVAQREEIIRRTVYV 907
             Y  NN      M  NA  N   N     +K  Y+QGKR+++ RTS+AQREEIIRRTVYV
Sbjct: 139  FYTNNNNYDPAFMLTNASRNGQLNGSAARRKKNYNQGKRRLNSRTSMAQREEIIRRTVYV 198

Query: 908  SDIDHQVTEEQLAALFIGCGQVVDCRVCGDPNSILRFAFVEFTDEEAAHAALALSGTMLG 1087
            SDID QVTEEQLAALF+GCGQVVDCR+CGDPNS+LRFAF+EFT EE A AAL L+GT+LG
Sbjct: 199  SDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTHEEGARAALNLAGTVLG 258

Query: 1088 YYPVRVLPSKTAIAPVNPTFLPQTLDEREMCARTVYVTNIDKK 1216
            YYPVRVLPSKTAIAPVNPTFLP++ DEREMC RT+Y TNIDKK
Sbjct: 259  YYPVRVLPSKTAIAPVNPTFLPRSDDEREMCIRTIYCTNIDKK 301



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +2

Query: 881  EIIRRTVYVSDIDHQVTEEQLAALFIG-CGQVVDCRVCGDPNSILRFAFVEFTDEEAAHA 1057
            E+  RT+Y ++ID +VT+  +   F   CG+V   R+ GD +   R AFVEF   E+A A
Sbjct: 287  EMCIRTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 346

Query: 1058 ALALSGTMLGYYPVRVLPSKTAIAPVNP 1141
            AL  SG +LG  P+RV PSKT + P  P
Sbjct: 347  ALNCSGVVLGSLPIRVSPSKTPVRPRAP 374


>emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]
          Length = 369

 Score =  252 bits (644), Expect = 1e-64
 Identities = 140/239 (58%), Positives = 163/239 (68%), Gaps = 6/239 (2%)
 Frame = +2

Query: 518  DRSMWLKLRHSQATPTHLHHHQRW---PNNGSTEVFQREMLQLEAMFTKLSPMAQPYVXX 688
            DRS  + +++ Q  P    H         NG + V  RE   L+ +F+KL+PMA+ +V  
Sbjct: 99   DRSQKIGVQNMQVGPVAAQHRSNGGXLQRNGDSGVDMRE---LQELFSKLNPMAEEFVPP 155

Query: 689  XXXXXXXXXXXXXXYAVNNIAAANDMHLNAFANNNENTGQ---RWKKNGYDQGKRKMSGR 859
                             NN          +  +NN   GQ   R KKN + QGKR+M+ R
Sbjct: 156  SL--------------ANNGLNGGFYSNGSETHNNTRNGQVNGRRKKNNFGQGKRRMNSR 201

Query: 860  TSVAQREEIIRRTVYVSDIDHQVTEEQLAALFIGCGQVVDCRVCGDPNSILRFAFVEFTD 1039
            TS+AQREEIIRRTVYVSDID QVTEE+LAALFI CGQVVDCRVCGDPNS+LRFAFVEFTD
Sbjct: 202  TSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTD 261

Query: 1040 EEAAHAALALSGTMLGYYPVRVLPSKTAIAPVNPTFLPQTLDEREMCARTVYVTNIDKK 1216
            EE A AAL+L+GTMLGYYPVRVLPSKTAIAPVNPTFLP+  DEREMCART+Y TNIDKK
Sbjct: 262  EEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKK 320


>ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
            gi|332193409|gb|AEE31530.1| CTC-interacting domain 11
            protein [Arabidopsis thaliana]
          Length = 406

 Score =  250 bits (639), Expect = 4e-64
 Identities = 139/257 (54%), Positives = 172/257 (66%), Gaps = 9/257 (3%)
 Frame = +2

Query: 473  SKMVVGESGFSREA--HDRSMWLKLRHSQATPTHLHHH-QRWPNNGSTEVFQREMLQLEA 643
            S M   +SG S +   H   +   LRH Q   + +  H  R       E F+R+M +L+ 
Sbjct: 29   SSMTSQDSGVSSDDQNHHSRIDQVLRHDQGLYSKIGSHVARSDGVDGGESFKRDMRELQE 88

Query: 644  MFTKLSPMAQPYVXXXXXXXXXXXXXXXXYAVNNIAAANDMHLNAFANN------NENTG 805
            +F+KL+PMA+ +V                +     +A +    N FA        NEN G
Sbjct: 89   LFSKLNPMAEEFVPPSLNKQGGNGVNGGFFT----SAGSFFRNNGFAGTGNGGYGNENGG 144

Query: 806  QRWKKNGYDQGKRKMSGRTSVAQREEIIRRTVYVSDIDHQVTEEQLAALFIGCGQVVDCR 985
             R KK+ + QGKR+M+ RTS+AQRE++IRRTVYVSD+D QVTEEQLA LF+ CGQVVDCR
Sbjct: 145  FRRKKS-FGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCR 203

Query: 986  VCGDPNSILRFAFVEFTDEEAAHAALALSGTMLGYYPVRVLPSKTAIAPVNPTFLPQTLD 1165
            +CGDPNS+LRFAF+EFTDEE A  AL LSGTMLG+YPV+VLPSKTAIAPVNPTFLP+T D
Sbjct: 204  ICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTED 263

Query: 1166 EREMCARTVYVTNIDKK 1216
            EREMCART+Y TNIDKK
Sbjct: 264  EREMCARTIYCTNIDKK 280



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +2

Query: 881  EIIRRTVYVSDIDHQVTEEQLAALFIG-CGQVVDCRVCGDPNSILRFAFVEFTDEEAAHA 1057
            E+  RT+Y ++ID +VT+  +   F   CG+V   R+ GD     R AFVEF   E+A A
Sbjct: 266  EMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIA 325

Query: 1058 ALALSGTMLGYYPVR 1102
            AL  SG +LG  P+R
Sbjct: 326  ALNCSGVVLGSLPIR 340


>ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
            gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17
            [Arabidopsis thaliana] gi|332193408|gb|AEE31529.1|
            CTC-interacting domain 11 protein [Arabidopsis thaliana]
          Length = 358

 Score =  250 bits (639), Expect = 4e-64
 Identities = 139/257 (54%), Positives = 172/257 (66%), Gaps = 9/257 (3%)
 Frame = +2

Query: 473  SKMVVGESGFSREA--HDRSMWLKLRHSQATPTHLHHH-QRWPNNGSTEVFQREMLQLEA 643
            S M   +SG S +   H   +   LRH Q   + +  H  R       E F+R+M +L+ 
Sbjct: 29   SSMTSQDSGVSSDDQNHHSRIDQVLRHDQGLYSKIGSHVARSDGVDGGESFKRDMRELQE 88

Query: 644  MFTKLSPMAQPYVXXXXXXXXXXXXXXXXYAVNNIAAANDMHLNAFANN------NENTG 805
            +F+KL+PMA+ +V                +     +A +    N FA        NEN G
Sbjct: 89   LFSKLNPMAEEFVPPSLNKQGGNGVNGGFFT----SAGSFFRNNGFAGTGNGGYGNENGG 144

Query: 806  QRWKKNGYDQGKRKMSGRTSVAQREEIIRRTVYVSDIDHQVTEEQLAALFIGCGQVVDCR 985
             R KK+ + QGKR+M+ RTS+AQRE++IRRTVYVSD+D QVTEEQLA LF+ CGQVVDCR
Sbjct: 145  FRRKKS-FGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCR 203

Query: 986  VCGDPNSILRFAFVEFTDEEAAHAALALSGTMLGYYPVRVLPSKTAIAPVNPTFLPQTLD 1165
            +CGDPNS+LRFAF+EFTDEE A  AL LSGTMLG+YPV+VLPSKTAIAPVNPTFLP+T D
Sbjct: 204  ICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTED 263

Query: 1166 EREMCARTVYVTNIDKK 1216
            EREMCART+Y TNIDKK
Sbjct: 264  EREMCARTIYCTNIDKK 280



 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +2

Query: 881  EIIRRTVYVSDIDHQVTEEQLAALFIG-CGQVVDCRVCGDPNSILRFAFVEFTDEEAAHA 1057
            E+  RT+Y ++ID +VT+  +   F   CG+V   R+ GD     R AFVEF   E+A A
Sbjct: 266  EMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIA 325

Query: 1058 ALALSGTMLGYYPVRVLPSKTAIAPVNP 1141
            AL  SG +LG  P+RV PSKT + P +P
Sbjct: 326  ALNCSGVVLGSLPIRVSPSKTPVRPRSP 353