BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016882
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Popu...   186   2e-45
ref|XP_002336366.1| rna-dependent RNA polymerase [Populus tricho...   185   3e-45
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab...   174   9e-42
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              172   2e-41
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   172   2e-41

>ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Populus trichocarpa]
           gi|222852929|gb|EEE90476.1| hypothetical protein
           POPTRDRAFT_562705 [Populus trichocarpa]
          Length = 406

 Score =  186 bits (471), Expect = 2e-45
 Identities = 92/144 (63%), Positives = 112/144 (77%)
 Frame = -1

Query: 435 LRVASNHAGLDYAYIAQRMISAGLPLNEPYLQVCLSNLESGEKAKLKQGKITINESFYLM 256
           LRVA N+  +D   +A  MI  G+PL EPYLQ  LS L+  EK  LK GKI + ES+YLM
Sbjct: 246 LRVALNYGDMDDNIVAT-MIGCGIPLEEPYLQHHLSILKKEEKKSLKGGKIPVPESYYLM 304

Query: 255 GTADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAVYVKELEEVVGNAKF 76
           GTADPTG+L +DEVC+ILD GQ+SG+VLVYRNPG+HFGDIH+++A YV+ELE+ VGNAK+
Sbjct: 305 GTADPTGLLESDEVCIILDCGQVSGEVLVYRNPGLHFGDIHILKATYVRELEDFVGNAKY 364

Query: 75  GIFFSTKGHRSAAYEMATGDFDGD 4
            IFF  KG RS A EM+ GDFDGD
Sbjct: 365 AIFFPCKGPRSLADEMSGGDFDGD 388


>ref|XP_002336366.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222834816|gb|EEE73265.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 320

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/144 (63%), Positives = 111/144 (77%)
 Frame = -1

Query: 435 LRVASNHAGLDYAYIAQRMISAGLPLNEPYLQVCLSNLESGEKAKLKQGKITINESFYLM 256
           LRVA N+  +D   +A  MI  G+PL EPYLQ  LS L   EK  LK GKI + ES+YLM
Sbjct: 22  LRVALNYGDMDDNIVAT-MIGCGIPLEEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLM 80

Query: 255 GTADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAVYVKELEEVVGNAKF 76
           GTADPTG+L +DEVC+ILD GQISG+VL+YRNPG+HFGDIH+++A YV+ELE+ VGNAK+
Sbjct: 81  GTADPTGLLESDEVCIILDCGQISGEVLIYRNPGLHFGDIHILKATYVRELEDFVGNAKY 140

Query: 75  GIFFSTKGHRSAAYEMATGDFDGD 4
            IFF  KG RS A EM+ GDFDGD
Sbjct: 141 AIFFPCKGPRSLADEMSGGDFDGD 164


>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
           gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 5;
           Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
           5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 977

 Score =  174 bits (440), Expect = 9e-42
 Identities = 88/144 (61%), Positives = 106/144 (73%)
 Frame = -1

Query: 435 LRVASNHAGLDYAYIAQRMISAGLPLNEPYLQVCLSNLESGEKAKLKQGKITINESFYLM 256
           L  A N+  +D    AQ MI  G+PL+EP+L+  LS L   EK  LK GK+ + ES+YLM
Sbjct: 544 LNAALNYGEMDDQNAAQ-MILVGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTESYYLM 602

Query: 255 GTADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAVYVKELEEVVGNAKF 76
           GT DPTG L  DEVCVIL+SGQISG+VLVYRNPG+HFGDIH+++A YVK LEE VGN+KF
Sbjct: 603 GTVDPTGALKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKF 662

Query: 75  GIFFSTKGHRSAAYEMATGDFDGD 4
            +FF  KG RS   E+A GDFDGD
Sbjct: 663 AVFFPQKGPRSLGDEIAGGDFDGD 686


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  172 bits (437), Expect = 2e-41
 Identities = 83/144 (57%), Positives = 108/144 (75%)
 Frame = -1

Query: 435 LRVASNHAGLDYAYIAQRMISAGLPLNEPYLQVCLSNLESGEKAKLKQGKITINESFYLM 256
           LRV+     +D + I  RMI +G+P++EP+L  CLS + + E+  L+ GK+ +N+ FYLM
Sbjct: 495 LRVSLRFGEMDDS-IVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLM 553

Query: 255 GTADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAVYVKELEEVVGNAKF 76
           GTADPTG L +DEVC+ILD GQ+ G+VLVY++PG+HFGDIHV+ A YV+ LEE VGNAK+
Sbjct: 554 GTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKY 613

Query: 75  GIFFSTKGHRSAAYEMATGDFDGD 4
            IFF  KG RS A EMA  DFDGD
Sbjct: 614 AIFFPIKGPRSLADEMANSDFDGD 637


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score =  172 bits (437), Expect = 2e-41
 Identities = 83/144 (57%), Positives = 108/144 (75%)
 Frame = -1

Query: 435 LRVASNHAGLDYAYIAQRMISAGLPLNEPYLQVCLSNLESGEKAKLKQGKITINESFYLM 256
           LRV+     +D + I  RMI +G+P++EP+L  CLS + + E+  L+ GK+ +N+ FYLM
Sbjct: 509 LRVSLRFGEMDDS-IVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLM 567

Query: 255 GTADPTGVLNNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAVYVKELEEVVGNAKF 76
           GTADPTG L +DEVC+ILD GQ+ G+VLVY++PG+HFGDIHV+ A YV+ LEE VGNAK+
Sbjct: 568 GTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKY 627

Query: 75  GIFFSTKGHRSAAYEMATGDFDGD 4
            IFF  KG RS A EMA  DFDGD
Sbjct: 628 AIFFPIKGPRSLADEMANSDFDGD 651