BLASTX nr result

ID: Scutellaria23_contig00016838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016838
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF76467.1|AC020622_1 Contains similarity to excision repair ...   214   8e-54
ref|NP_171691.2| 5'-3' exonuclease-like protein [Arabidopsis tha...   214   8e-54
ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vit...   210   1e-52
emb|CAN80577.1| hypothetical protein VITISV_031734 [Vitis vinifera]   210   1e-52
ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256 [Arab...   209   2e-52

>gb|AAF76467.1|AC020622_1 Contains similarity to excision repair protein ERCC5 from Homo
           sapiens gi|1082359 and contains XPG N-terminal PF|00752
           and XPG I-region PF|00867 domains [Arabidopsis thaliana]
          Length = 497

 Score =  214 bits (544), Expect = 8e-54
 Identities = 102/132 (77%), Positives = 119/132 (90%)
 Frame = -3

Query: 396 MGVGGHFWDLLKPHARFEGFDFLRNKRVAVDLSYWIVQHETAIKGYVRNPHIRLTFFRTV 217
           MGVGG+FWDLL+P+A+ +GFDFLRNKRVAVDLS+WIVQHETA+KG+V  PH+RLTFFRT+
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 216 NLFSKFGAYPVFVLDGTPSPLKSQARILRFFRLSGIDLSSSLPEAEKGVSVERNKTFKKY 37
           NLFSKFGAYPVFV+DGTPSPLKSQARI RFFR SGID + +LP  + GVSVERNK F ++
Sbjct: 61  NLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGID-TCNLPVIKDGVSVERNKLFSEW 119

Query: 36  IEECVELLELLG 1
           + ECVELLELLG
Sbjct: 120 VRECVELLELLG 131


>ref|NP_171691.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
           gi|357529503|sp|Q9LPD2.3|GENL1_ARATH RecName: Full=Flap
           endonuclease GEN-like 1 gi|332189224|gb|AEE27345.1|
           5'-3' exonuclease-like protein [Arabidopsis thaliana]
          Length = 599

 Score =  214 bits (544), Expect = 8e-54
 Identities = 102/132 (77%), Positives = 119/132 (90%)
 Frame = -3

Query: 396 MGVGGHFWDLLKPHARFEGFDFLRNKRVAVDLSYWIVQHETAIKGYVRNPHIRLTFFRTV 217
           MGVGG+FWDLL+P+A+ +GFDFLRNKRVAVDLS+WIVQHETA+KG+V  PH+RLTFFRT+
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 216 NLFSKFGAYPVFVLDGTPSPLKSQARILRFFRLSGIDLSSSLPEAEKGVSVERNKTFKKY 37
           NLFSKFGAYPVFV+DGTPSPLKSQARI RFFR SGID + +LP  + GVSVERNK F ++
Sbjct: 61  NLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGID-TCNLPVIKDGVSVERNKLFSEW 119

Query: 36  IEECVELLELLG 1
           + ECVELLELLG
Sbjct: 120 VRECVELLELLG 131


>ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
           gi|296089141|emb|CBI38844.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score =  210 bits (534), Expect = 1e-52
 Identities = 103/132 (78%), Positives = 116/132 (87%)
 Frame = -3

Query: 396 MGVGGHFWDLLKPHARFEGFDFLRNKRVAVDLSYWIVQHETAIKGYVRNPHIRLTFFRTV 217
           MGVGG FW+LLKP+AR EGFD++RNKRVAVDLS+WIVQ ETA K  VRNPH+RLTFFRT+
Sbjct: 1   MGVGGSFWELLKPYARPEGFDYIRNKRVAVDLSFWIVQQETATKANVRNPHLRLTFFRTI 60

Query: 216 NLFSKFGAYPVFVLDGTPSPLKSQARILRFFRLSGIDLSSSLPEAEKGVSVERNKTFKKY 37
           NLFSKFGA+PVFV+DGTPSPLKSQARI RFFR SGIDL S LP  E+GVSVERN  F + 
Sbjct: 61  NLFSKFGAFPVFVVDGTPSPLKSQARIARFFRGSGIDL-SGLPVVEEGVSVERNAEFSRR 119

Query: 36  IEECVELLELLG 1
           ++ECVELLELLG
Sbjct: 120 VQECVELLELLG 131


>emb|CAN80577.1| hypothetical protein VITISV_031734 [Vitis vinifera]
          Length = 239

 Score =  210 bits (534), Expect = 1e-52
 Identities = 103/132 (78%), Positives = 116/132 (87%)
 Frame = -3

Query: 396 MGVGGHFWDLLKPHARFEGFDFLRNKRVAVDLSYWIVQHETAIKGYVRNPHIRLTFFRTV 217
           MGVGG FW+LLKP+AR EGFD++RNKRVAVDLS+WIVQ ETA K  VRNPH+RLTFFRT+
Sbjct: 1   MGVGGSFWELLKPYARPEGFDYIRNKRVAVDLSFWIVQQETATKANVRNPHLRLTFFRTI 60

Query: 216 NLFSKFGAYPVFVLDGTPSPLKSQARILRFFRLSGIDLSSSLPEAEKGVSVERNKTFKKY 37
           NLFSKFGA+PVFV+DGTPSPLKSQARI RFFR SGIDL S LP  E+GVSVERN  F + 
Sbjct: 61  NLFSKFGAFPVFVVDGTPSPLKSQARIARFFRGSGIDL-SGLPVVEEGVSVERNAEFSRR 119

Query: 36  IEECVELLELLG 1
           ++ECVELLELLG
Sbjct: 120 VQECVELLELLG 131


>ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256 [Arabidopsis lyrata subsp.
           lyrata] gi|297335190|gb|EFH65607.1| hypothetical protein
           ARALYDRAFT_311256 [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score =  209 bits (531), Expect = 2e-52
 Identities = 100/131 (76%), Positives = 118/131 (90%)
 Frame = -3

Query: 396 MGVGGHFWDLLKPHARFEGFDFLRNKRVAVDLSYWIVQHETAIKGYVRNPHIRLTFFRTV 217
           MGVGG+FWDLL+P+A+  GFD+LRNKRVAVDLS+WIVQHETA+KG+V  PH+RLTFFRT+
Sbjct: 1   MGVGGNFWDLLRPYAQQRGFDYLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 216 NLFSKFGAYPVFVLDGTPSPLKSQARILRFFRLSGIDLSSSLPEAEKGVSVERNKTFKKY 37
           NLFSKFGAYPVFV+DGTPSPLKSQARI RFFR SGID + +LP  + GVSVERNK F ++
Sbjct: 61  NLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGID-TCNLPVIKDGVSVERNKLFCEW 119

Query: 36  IEECVELLELL 4
           ++ECVELLELL
Sbjct: 120 VKECVELLELL 130


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