BLASTX nr result

ID: Scutellaria23_contig00016791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016791
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] gi...   104   6e-21
gb|ABK93977.1| unknown [Populus trichocarpa]                          104   6e-21
gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]       100   9e-20
gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]        100   1e-19
sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; A...   100   1e-19

>ref|XP_002326411.1| histone deacetylase [Populus trichocarpa]
           gi|222833604|gb|EEE72081.1| histone deacetylase [Populus
           trichocarpa]
          Length = 271

 Score =  104 bits (260), Expect = 6e-21
 Identities = 49/66 (74%), Positives = 55/66 (83%)
 Frame = +1

Query: 79  MEFWGVEVKCGEPLKVTPGDGMVLHLSQACLGELKNVKGNESVCMFVNVDGKKLVLGTLF 258
           MEFWGVEVK GEPL+V  GDG +LHLSQACLGE K  KGNESVC+FVN D +KLVLGTL 
Sbjct: 1   MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60

Query: 259 TDKLPQ 276
            +K+PQ
Sbjct: 61  HEKIPQ 66


>gb|ABK93977.1| unknown [Populus trichocarpa]
          Length = 305

 Score =  104 bits (260), Expect = 6e-21
 Identities = 49/66 (74%), Positives = 55/66 (83%)
 Frame = +1

Query: 79  MEFWGVEVKCGEPLKVTPGDGMVLHLSQACLGELKNVKGNESVCMFVNVDGKKLVLGTLF 258
           MEFWGVEVK GEPL+V  GDG +LHLSQACLGE K  KGNESVC+FVN D +KLVLGTL 
Sbjct: 1   MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60

Query: 259 TDKLPQ 276
            +K+PQ
Sbjct: 61  HEKIPQ 66


>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/66 (75%), Positives = 55/66 (83%)
 Frame = +1

Query: 79  MEFWGVEVKCGEPLKVTPGDGMVLHLSQACLGELKNVKGNESVCMFVNVDGKKLVLGTLF 258
           MEFWG EVK GEPL V PGDGMVLHLSQA LGELK  K  +SVC+ VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKA-QSVCLSVNIDGKKLVLGTLS 59

Query: 259 TDKLPQ 276
           +DK+PQ
Sbjct: 60  SDKVPQ 65


>gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]
          Length = 203

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/66 (75%), Positives = 56/66 (84%)
 Frame = +1

Query: 79  MEFWGVEVKCGEPLKVTPGDGMVLHLSQACLGELKNVKGNESVCMFVNVDGKKLVLGTLF 258
           MEFWG EVK GEPL V PGDGMVLHLSQA LGELK  K +ESVC+ VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDK-SESVCLSVNIDGKKLVLGTLN 59

Query: 259 TDKLPQ 276
           ++K+PQ
Sbjct: 60  SEKVPQ 65


>sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
           deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
           gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum
           chacoense]
          Length = 269

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/66 (75%), Positives = 56/66 (84%)
 Frame = +1

Query: 79  MEFWGVEVKCGEPLKVTPGDGMVLHLSQACLGELKNVKGNESVCMFVNVDGKKLVLGTLF 258
           MEFWG EVK GEPL V PGDGMVLHLSQA LGELK  K +ESVC+ VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDK-SESVCLSVNIDGKKLVLGTLN 59

Query: 259 TDKLPQ 276
           ++K+PQ
Sbjct: 60  SEKVPQ 65


Top