BLASTX nr result

ID: Scutellaria23_contig00016776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016776
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513029.1| protein with unknown function [Ricinus commu...    66   3e-09
ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]    62   5e-08
ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, c...    61   8e-08
dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatu...    60   1e-07

>ref|XP_002513029.1| protein with unknown function [Ricinus communis]
           gi|223548040|gb|EEF49532.1| protein with unknown
           function [Ricinus communis]
          Length = 143

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/53 (56%), Positives = 42/53 (79%)
 Frame = -2

Query: 189 NHKRSQKGKQKDETSLKVVYISSPMKVRTSTTRFRALVQQLTGKNSDVAQYMD 31
           N K  ++  ++ +  +KVVYISSPMKV TS ++FRALVQ+LTGK+SD A++MD
Sbjct: 7   NMKSRKQASKRSKKGIKVVYISSPMKVETSASKFRALVQELTGKDSDAARFMD 59


>ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|222841369|gb|EEE78916.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/63 (53%), Positives = 47/63 (74%)
 Frame = -2

Query: 201 STMTNHKRSQKGKQKDETSLKVVYISSPMKVRTSTTRFRALVQQLTGKNSDVAQYMDDHK 22
           + M + KRS   + K   ++KVVYISSPMKV+TS ++FRALVQ+LTGK+SD  ++MD + 
Sbjct: 6   ANMKSGKRSHTKRGKK--AIKVVYISSPMKVKTSASKFRALVQELTGKDSDAERFMDING 63

Query: 21  ATD 13
           A D
Sbjct: 64  ARD 66


>emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]
          Length = 124

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/49 (59%), Positives = 43/49 (87%)
 Frame = -2

Query: 174 QKGKQKDETSLKVVYISSPMKVRTSTTRFRALVQQLTGKNSDVAQYMDD 28
           ++GK +   ++KVVYISSPMKV+TS ++FRALVQ+LTG++SDV +YM++
Sbjct: 3   KQGKSR-RAAVKVVYISSPMKVKTSASKFRALVQELTGRDSDVERYMEN 50


>ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Cucumis sativus] gi|449487122|ref|XP_004157503.1|
           PREDICTED: sigma factor binding protein 1,
           chloroplastic-like [Cucumis sativus]
          Length = 140

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/55 (49%), Positives = 43/55 (78%)
 Frame = -2

Query: 195 MTNHKRSQKGKQKDETSLKVVYISSPMKVRTSTTRFRALVQQLTGKNSDVAQYMD 31
           +T  K++++ K+      KVVYISSPMKV+TS ++FR+LVQ+LTG++SD  ++M+
Sbjct: 3   VTGKKQAKRSKKSAGAGFKVVYISSPMKVKTSASKFRSLVQKLTGQDSDAERFME 57


>dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatus subsp. vulgaris]
          Length = 146

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/55 (47%), Positives = 43/55 (78%)
 Frame = -2

Query: 195 MTNHKRSQKGKQKDETSLKVVYISSPMKVRTSTTRFRALVQQLTGKNSDVAQYMD 31
           +T  K++++ ++      KVVYISSPMKV+TS ++FR+LVQ+LTG++SD  ++M+
Sbjct: 3   VTGKKQAKRSRKSAAADFKVVYISSPMKVKTSASKFRSLVQRLTGQDSDAERFME 57


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