BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016689
         (1446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515948.1| pentatricopeptide repeat-containing protein,...   634   e-179
ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containi...   627   e-177
ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containi...   622   e-176
ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containi...   622   e-176
ref|XP_003594555.1| Pentatricopeptide repeat-containing protein ...   618   e-174

>ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544853|gb|EEF46368.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 706

 Score =  634 bits (1636), Expect = e-179
 Identities = 300/401 (74%), Positives = 352/401 (87%)
 Frame = +3

Query: 3    VDQAYKVFEDMKRKYCEPDEYTYTILIRMNGKLGKPKEALALFEEMLSKDCKPNSMTYNT 182
            VDQA+KVFEDMK+K+CEPDEYTYTI+IRM G++GK  E+LALFEEML+K C PN + YNT
Sbjct: 93   VDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNT 152

Query: 183  LIEALVRGRLVDKILIVFSKMVDTNCRPNEFTYSLVLNVLAMEGQLDRMDEVVRISNKFM 362
            +I+AL   R+VDK +++FSKM++ NCRPNEFTYS++L +LA EGQL ++D+VV +S K+M
Sbjct: 153  MIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLHKLDKVVELSRKYM 212

Query: 363  NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDKGDRDAYLSMLESLCNAGKVAEAIDML 542
            N+SIYAYLVRTL+KLGHASEAHRLFCNMWS+HD+GDRDA LSMLESLCNAGK  EAID+L
Sbjct: 213  NRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLSMLESLCNAGKTVEAIDLL 272

Query: 543  SRTHEKGIITDTFMYNTVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRA 722
             + HEKGI TDT MYNTVF+ALG+ KQ+ HL DLY+KMK +GP PDIFTYNILISSFGRA
Sbjct: 273  GKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRA 332

Query: 723  GRVEEAVRIFEELESSECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTY 902
            G+V EA++IFEELE+S+C+PDIISYNSLINCLGKNGDLDEAH+RF+EMQEKGLNPDVVTY
Sbjct: 333  GKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTY 392

Query: 903  STLIECFGKTDKIEMAYSLFNEMLAEGCCPNIVTYNILLDCFEKSGRSAEAVDLYSKLKE 1082
            STLIECFGKTDK+EMA  LF+EMLAEGC PNIVTYNILLDC E+SGR+AEAVDLY+KLK+
Sbjct: 393  STLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGRTAEAVDLYAKLKQ 452

Query: 1083 QGLTPDSITYAILEXXXXXXXXXXXXXXXNPITGWVVSPLR 1205
            QGLTPDSITY++LE               NPITGWVVSPLR
Sbjct: 453  QGLTPDSITYSVLERLQSGSHRKLRVRRKNPITGWVVSPLR 493



 Score =  102 bits (254), Expect = 2e-19
 Identities = 46/155 (29%), Positives = 90/155 (58%)
 Frame = +3

Query: 579  FMYNTVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRAGRVEEAVRIFEE 758
            + Y  +  A  +S    +   +Y +MK++G T DIF +N+L+ +  +  +V++A ++FE+
Sbjct: 43   YTYKCLVQAYLRSCDSDNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFED 102

Query: 759  LESSECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDK 938
            ++   C PD  +Y  +I   G+ G LDE+   F+EM  KG +P+++ Y+T+I+    +  
Sbjct: 103  MKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRM 162

Query: 939  IEMAYSLFNEMLAEGCCPNIVTYNILLDCFEKSGR 1043
            ++    LF++M+ + C PN  TY+++L      G+
Sbjct: 163  VDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQ 197



 Score =  102 bits (253), Expect = 3e-19
 Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 32/217 (14%)
 Frame = +3

Query: 558  KGIITDTFMYNTVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRAGRVEE 737
            KG   D F +N +  AL K ++V     +++ MK++   PD +TY I+I   GR G+++E
Sbjct: 71   KGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDE 130

Query: 738  AVRIFEELESSECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTYS---T 908
            ++ +FEE+ +  C P++I+YN++I  L  +  +D+  + F +M EK   P+  TYS   T
Sbjct: 131  SLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILT 190

Query: 909  LIECFGKTDKIEMAYSLFNEML--------------------AEGCCPNIVTYN------ 1010
            L+   G+  K++    L  + +                    A     N+ +Y+      
Sbjct: 191  LLAAEGQLHKLDKVVELSRKYMNRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRD 250

Query: 1011 ---ILLDCFEKSGRSAEAVDLYSKLKEQGLTPDSITY 1112
                +L+    +G++ EA+DL  K+ E+G+  D+I Y
Sbjct: 251  ACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMY 287



 Score = 98.6 bits (244), Expect = 4e-18
 Identities = 49/180 (27%), Positives = 97/180 (53%), Gaps = 2/180 (1%)
 Frame = +3

Query: 588  NTVFSALGKSKQVPHLLDLYDK--MKQEGPTPDIFTYNILISSFGRAGRVEEAVRIFEEL 761
            N +    G  + +   + L +K  +K  G     +TY  L+ ++ R+   +   R++ E+
Sbjct: 14   NILIGFFGDGEDLERCIGLIEKWDLKMNG-----YTYKCLVQAYLRSCDSDNGFRVYLEM 68

Query: 762  ESSECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKI 941
            +      DI ++N L++ L K+  +D+A   F++M++K   PD  TY+ +I   G+  K+
Sbjct: 69   KRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKL 128

Query: 942  EMAYSLFNEMLAEGCCPNIVTYNILLDCFEKSGRSAEAVDLYSKLKEQGLTPDSITYAIL 1121
            + + +LF EML +GC PN++ YN ++     S    + + L+SK+ E+   P+  TY+++
Sbjct: 129  DESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVI 188


>ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
            [Vitis vinifera]
          Length = 990

 Score =  627 bits (1617), Expect = e-177
 Identities = 302/405 (74%), Positives = 347/405 (85%)
 Frame = +3

Query: 3    VDQAYKVFEDMKRKYCEPDEYTYTILIRMNGKLGKPKEALALFEEMLSKDCKPNSMTYNT 182
            VDQ Y VF+DMKRK+CEPDEYTYTI+IRM GK+GK  E+L LF+EM  K   PN + YNT
Sbjct: 93   VDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNT 152

Query: 183  LIEALVRGRLVDKILIVFSKMVDTNCRPNEFTYSLVLNVLAMEGQLDRMDEVVRISNKFM 362
            +I+AL   R+VDK + +FSKMV+ NCRPN FT+S++LNVL  EGQL R+DEVV +SNKFM
Sbjct: 153  MIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFM 212

Query: 363  NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDKGDRDAYLSMLESLCNAGKVAEAIDML 542
            NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHD+GDRDAY+SMLESLC+AGK  EA+D+L
Sbjct: 213  NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLL 272

Query: 543  SRTHEKGIITDTFMYNTVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRA 722
            S+ HEK I TDT MYNTV SALGK K+   L DLY+KMKQ+GP+PDIF+YNILISSFGRA
Sbjct: 273  SKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRA 332

Query: 723  GRVEEAVRIFEELESSECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTY 902
            GRVEEAV+IFEELE+S C+PDIIS+NSLINCLGKNGD+DEAHMRFKEM+E+GL+PDVVTY
Sbjct: 333  GRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTY 392

Query: 903  STLIECFGKTDKIEMAYSLFNEMLAEGCCPNIVTYNILLDCFEKSGRSAEAVDLYSKLKE 1082
            STLIECFGKTDK+EMA  LF+EMLAEGC PNIVTYNILLDC E+SGR+AEAVDLY+KLK+
Sbjct: 393  STLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQ 452

Query: 1083 QGLTPDSITYAILEXXXXXXXXXXXXXXXNPITGWVVSPLR*QKE 1217
            QGLTPDSITYA+LE               NPITGWVVSPLR Q +
Sbjct: 453  QGLTPDSITYAVLERLQSGSHQKVRVRRKNPITGWVVSPLRLQNQ 497



 Score = 97.8 bits (242), Expect = 6e-18
 Identities = 46/174 (26%), Positives = 93/174 (53%), Gaps = 3/174 (1%)
 Frame = +3

Query: 579  FMYNTVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRAGRVEEAVRIFEE 758
            + Y  +  A  +S       ++Y ++++ G   DIF YN+L+ +  +  +V++   +F++
Sbjct: 43   YTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKD 102

Query: 759  LESSECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDK 938
            ++   C PD  +Y  +I   GK G  DE+   F+EM EKG  P+++ Y+T+I+       
Sbjct: 103  MKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRM 162

Query: 939  IEMAYSLFNEMLAEGCCPNIVTYNILLDCF---EKSGRSAEAVDLYSKLKEQGL 1091
            ++    LF++M+   C PN  T++++L+      + GR  E V++ +K   + +
Sbjct: 163  VDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNKSI 216



 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 49/178 (27%), Positives = 89/178 (50%)
 Frame = +3

Query: 588  NTVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRAGRVEEAVRIFEELES 767
            N +    G    V    DL  K   +    + +TY  L+ +  R+    +A  ++ EL  
Sbjct: 14   NILIGIFGGGADVERCFDLVKKWDLQ---MNCYTYKCLLQAHLRSNNSNKAFEVYVELRR 70

Query: 768  SECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKIEM 947
               + DI +YN L++ L K+  +D+ +M FK+M+ K   PD  TY+ +I   GK  K + 
Sbjct: 71   RGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADE 130

Query: 948  AYSLFNEMLAEGCCPNIVTYNILLDCFEKSGRSAEAVDLYSKLKEQGLTPDSITYAIL 1121
            + +LF EM  +G  PN++ YN ++     +    + + L+SK+ E    P+  T++++
Sbjct: 131  SLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVI 188



 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 64/282 (22%), Positives = 135/282 (47%), Gaps = 3/282 (1%)
 Frame = +3

Query: 276  TYSLVLNVLAMEGQLDRMDEVVRISNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSF 455
            T ++++ +      ++R  ++V+  +  MN   Y  L++   +  ++++A  ++  +   
Sbjct: 12   TINILIGIFGGGADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRR 71

Query: 456  HDKGDRDAYLSMLESLCNAGKVAEAIDMLSRTHEKGIITDTFMYNTVFSALGKSKQVPHL 635
              K D  AY  +L++L    KV +   +      K    D + Y  +    GK  +    
Sbjct: 72   GYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADES 131

Query: 636  LDLYDKMKQEGPTPDIFTYNILISSFGRAGRVEEAVRIFEELESSECRPDIISYNSLINC 815
            L L+ +M ++G TP++  YN +I +      V++ + +F ++  + CRP+  +++ ++N 
Sbjct: 132  LTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNV 191

Query: 816  L---GKNGDLDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKIEMAYSLFNEMLAEGC 986
            L   G+ G LDE      E+  K +N  +  Y+ L+    K      A+ LF  M +   
Sbjct: 192  LVAEGQLGRLDEV----VEVSNKFMNKSI--YAYLVRTLSKLGHASEAHRLFCNMWSFHD 245

Query: 987  CPNIVTYNILLDCFEKSGRSAEAVDLYSKLKEQGLTPDSITY 1112
              +   Y  +L+    +G++ EA+DL SK+ E+ ++ D++ Y
Sbjct: 246  EGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMY 287


>ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
            mitochondrial-like [Cucumis sativus]
          Length = 685

 Score =  622 bits (1605), Expect = e-176
 Identities = 293/401 (73%), Positives = 343/401 (85%)
 Frame = +3

Query: 3    VDQAYKVFEDMKRKYCEPDEYTYTILIRMNGKLGKPKEALALFEEMLSKDCKPNSMTYNT 182
            +D++YKVF+DMK K+C PDEYTYTI+IRM GK+G+ +E+LALFEEML+K C PN + YNT
Sbjct: 285  LDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNT 344

Query: 183  LIEALVRGRLVDKILIVFSKMVDTNCRPNEFTYSLVLNVLAMEGQLDRMDEVVRISNKFM 362
            +I+AL +  +VDK +++F  M+  NCRPNEFTYS++LNVL  EGQL R+DEV+ +SNKF+
Sbjct: 345  MIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFI 404

Query: 363  NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDKGDRDAYLSMLESLCNAGKVAEAIDML 542
            NKSIYAYLVRTLSKLGH+SEAHRLFCNMWSFHD GDRDAY+SMLESLC  GK  EAI++L
Sbjct: 405  NKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELL 464

Query: 543  SRTHEKGIITDTFMYNTVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRA 722
            S+ HEKGI TDT MYNTV S LGK KQV HL DLY+KMKQ+GP PDIFTYNILISS GR 
Sbjct: 465  SKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRV 524

Query: 723  GRVEEAVRIFEELESSECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTY 902
            G+V+EAV +FEELESS+C+PDIISYNSLINCLGKNGD+DEAHMRF EMQ+KGLNPDVVTY
Sbjct: 525  GKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTY 584

Query: 903  STLIECFGKTDKIEMAYSLFNEMLAEGCCPNIVTYNILLDCFEKSGRSAEAVDLYSKLKE 1082
            STLIECFGKTDK+EMA SLF+ M+ +GCCPNIVTYNILLDC E++GR+AE VDLY+KL+E
Sbjct: 585  STLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLRE 644

Query: 1083 QGLTPDSITYAILEXXXXXXXXXXXXXXXNPITGWVVSPLR 1205
            QGLTPDSITYAIL+               NPITGWVVSPLR
Sbjct: 645  QGLTPDSITYAILDRLQSGSNRKFRVRRQNPITGWVVSPLR 685



 Score =  106 bits (264), Expect = 2e-20
 Identities = 61/213 (28%), Positives = 109/213 (51%)
 Frame = +3

Query: 483  LSMLESLCNAGKVAEAIDMLSRTHEKGIITDTFMYNTVFSALGKSKQVPHLLDLYDKMKQ 662
            LS   S     +V E +  + R   +G I+   +   +FS+    +    L+  +D    
Sbjct: 174  LSHSSSSKRIDQVREILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKWDLRL- 232

Query: 663  EGPTPDIFTYNILISSFGRAGRVEEAVRIFEELESSECRPDIISYNSLINCLGKNGDLDE 842
                 + +TY  L+ +  R+   + A  ++ E+ S+  + DI +YN L++ L K+  LD 
Sbjct: 233  -----NAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDR 287

Query: 843  AHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKIEMAYSLFNEMLAEGCCPNIVTYNILLD 1022
            ++  FK+M+ K  NPD  TY+ +I   GK  + E + +LF EML +GC PN++ YN ++ 
Sbjct: 288  SYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQ 347

Query: 1023 CFEKSGRSAEAVDLYSKLKEQGLTPDSITYAIL 1121
               KSG   +A+ L+  + +    P+  TY+I+
Sbjct: 348  ALSKSGMVDKAILLFCNMIKNNCRPNEFTYSII 380



 Score =  105 bits (262), Expect = 3e-20
 Identities = 78/346 (22%), Positives = 162/346 (46%), Gaps = 8/346 (2%)
 Frame = +3

Query: 99   LGKPKEALALFEEM--LSKDCKPNSMTYNTLIEALVRG---RLVDKILIVFSKMVDTNCR 263
            L  P  AL  F     L    + ++ TY+ ++  L      + +D++  + S+M     R
Sbjct: 140  LNSPDLALQFFHRCSSLCPKFRHDAFTYSRILLMLSHSSSSKRIDQVREILSQMDRDQIR 199

Query: 264  PNEFTYSLVLNVLAMEGQLDRMDEVVRISNKFMNKSIYAYLVRTLSKLGHASEAHRLFCN 443
                T ++++ + +    L+    +++  +  +N   Y  L++   +   +  A  ++  
Sbjct: 200  GTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYME 259

Query: 444  MWSFHDKGDRDAYLSMLESLCNAGKVAEAIDMLSRTHEKGIITDTFMYNTVFSALGKSKQ 623
            MWS   + D  AY  +L++L    ++  +  +      K    D + Y  +    GK  +
Sbjct: 260  MWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGR 319

Query: 624  VPHLLDLYDKMKQEGPTPDIFTYNILISSFGRAGRVEEAVRIFEELESSECRPDIISYNS 803
                L L+++M  +G TP++  YN +I +  ++G V++A+ +F  +  + CRP+  +Y+ 
Sbjct: 320  AEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSI 379

Query: 804  LINCL---GKNGDLDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKIEMAYSLFNEML 974
            ++N L   G+ G LDE      E+  K +N  +  Y+ L+    K      A+ LF  M 
Sbjct: 380  ILNVLVAEGQLGRLDEV----LEVSNKFINKSI--YAYLVRTLSKLGHSSEAHRLFCNMW 433

Query: 975  AEGCCPNIVTYNILLDCFEKSGRSAEAVDLYSKLKEQGLTPDSITY 1112
            +     +   Y  +L+   + G++ EA++L SK+ E+G++ D++ Y
Sbjct: 434  SFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMY 479


>ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
            mitochondrial-like [Cucumis sativus]
          Length = 690

 Score =  622 bits (1605), Expect = e-176
 Identities = 293/401 (73%), Positives = 343/401 (85%)
 Frame = +3

Query: 3    VDQAYKVFEDMKRKYCEPDEYTYTILIRMNGKLGKPKEALALFEEMLSKDCKPNSMTYNT 182
            +D++YKVF+DMK K+C PDEYTYTI+IRM GK+G+ +E+LALFEEML+K C PN + YNT
Sbjct: 290  LDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNT 349

Query: 183  LIEALVRGRLVDKILIVFSKMVDTNCRPNEFTYSLVLNVLAMEGQLDRMDEVVRISNKFM 362
            +I+AL +  +VDK +++F  M+  NCRPNEFTYS++LNVL  EGQL R+DEV+ +SNKF+
Sbjct: 350  MIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFI 409

Query: 363  NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDKGDRDAYLSMLESLCNAGKVAEAIDML 542
            NKSIYAYLVRTLSKLGH+SEAHRLFCNMWSFHD GDRDAY+SMLESLC  GK  EAI++L
Sbjct: 410  NKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELL 469

Query: 543  SRTHEKGIITDTFMYNTVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRA 722
            S+ HEKGI TDT MYNTV S LGK KQV HL DLY+KMKQ+GP PDIFTYNILISS GR 
Sbjct: 470  SKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRV 529

Query: 723  GRVEEAVRIFEELESSECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTY 902
            G+V+EAV +FEELESS+C+PDIISYNSLINCLGKNGD+DEAHMRF EMQ+KGLNPDVVTY
Sbjct: 530  GKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTY 589

Query: 903  STLIECFGKTDKIEMAYSLFNEMLAEGCCPNIVTYNILLDCFEKSGRSAEAVDLYSKLKE 1082
            STLIECFGKTDK+EMA SLF+ M+ +GCCPNIVTYNILLDC E++GR+AE VDLY+KL+E
Sbjct: 590  STLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLRE 649

Query: 1083 QGLTPDSITYAILEXXXXXXXXXXXXXXXNPITGWVVSPLR 1205
            QGLTPDSITYAIL+               NPITGWVVSPLR
Sbjct: 650  QGLTPDSITYAILDRLQSGSNRKFRVRRQNPITGWVVSPLR 690



 Score =  106 bits (264), Expect = 2e-20
 Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 18/297 (6%)
 Frame = +3

Query: 285  LVLNVLAMEGQLDRMDEVVRISNKFMNKSIY----------AYLVRTLSKLGHASEAHRL 434
            L+  V+ M    +    ++ I ++F + S Y          A     L  L     A + 
Sbjct: 95   LICRVIDMLLHRNPHSSLITIDDRFSDLSSYFQSLSVSLTPAEASEILKSLNSPDLALQF 154

Query: 435  FCNMWSFHDKGDRDAY--------LSMLESLCNAGKVAEAIDMLSRTHEKGIITDTFMYN 590
            F    S   K   DA+        LS   S     +V E +  + R   +G I+   +  
Sbjct: 155  FHRCSSLCPKFRHDAFTYSRILLMLSHSSSSKRIDQVREILSQMDRDQIRGTISTVNILI 214

Query: 591  TVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRAGRVEEAVRIFEELESS 770
             +FS+    +    L+  +D         + +TY  L+ +  R+   + A  ++ E+ S 
Sbjct: 215  KIFSSNEDLELCTGLIKKWDLRL------NAYTYRCLLQAHIRSRDSDRAFNVYMEMWSK 268

Query: 771  ECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKIEMA 950
              + DI +YN L++ L K+  LD ++  FK+M+ K  NPD  TY+ +I   GK  + E +
Sbjct: 269  GYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEES 328

Query: 951  YSLFNEMLAEGCCPNIVTYNILLDCFEKSGRSAEAVDLYSKLKEQGLTPDSITYAIL 1121
             +LF EML +GC PN++ YN ++    KSG   +A+ L+  + +    P+  TY+I+
Sbjct: 329  LALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSII 385



 Score =  105 bits (262), Expect = 3e-20
 Identities = 78/346 (22%), Positives = 162/346 (46%), Gaps = 8/346 (2%)
 Frame = +3

Query: 99   LGKPKEALALFEEM--LSKDCKPNSMTYNTLIEALVRG---RLVDKILIVFSKMVDTNCR 263
            L  P  AL  F     L    + ++ TY+ ++  L      + +D++  + S+M     R
Sbjct: 145  LNSPDLALQFFHRCSSLCPKFRHDAFTYSRILLMLSHSSSSKRIDQVREILSQMDRDQIR 204

Query: 264  PNEFTYSLVLNVLAMEGQLDRMDEVVRISNKFMNKSIYAYLVRTLSKLGHASEAHRLFCN 443
                T ++++ + +    L+    +++  +  +N   Y  L++   +   +  A  ++  
Sbjct: 205  GTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYME 264

Query: 444  MWSFHDKGDRDAYLSMLESLCNAGKVAEAIDMLSRTHEKGIITDTFMYNTVFSALGKSKQ 623
            MWS   + D  AY  +L++L    ++  +  +      K    D + Y  +    GK  +
Sbjct: 265  MWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGR 324

Query: 624  VPHLLDLYDKMKQEGPTPDIFTYNILISSFGRAGRVEEAVRIFEELESSECRPDIISYNS 803
                L L+++M  +G TP++  YN +I +  ++G V++A+ +F  +  + CRP+  +Y+ 
Sbjct: 325  AEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSI 384

Query: 804  LINCL---GKNGDLDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKIEMAYSLFNEML 974
            ++N L   G+ G LDE      E+  K +N  +  Y+ L+    K      A+ LF  M 
Sbjct: 385  ILNVLVAEGQLGRLDEV----LEVSNKFINKSI--YAYLVRTLSKLGHSSEAHRLFCNMW 438

Query: 975  AEGCCPNIVTYNILLDCFEKSGRSAEAVDLYSKLKEQGLTPDSITY 1112
            +     +   Y  +L+   + G++ EA++L SK+ E+G++ D++ Y
Sbjct: 439  SFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMY 484


>ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355483603|gb|AES64806.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  618 bits (1593), Expect = e-174
 Identities = 292/401 (72%), Positives = 347/401 (86%)
 Frame = +3

Query: 3    VDQAYKVFEDMKRKYCEPDEYTYTILIRMNGKLGKPKEALALFEEMLSKDCKPNSMTYNT 182
            VD+AYKVFEDMKR++CEPD +TYTI+IRM GK GK  E+LALF+ ML K    N + YNT
Sbjct: 239  VDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNT 298

Query: 183  LIEALVRGRLVDKILIVFSKMVDTNCRPNEFTYSLVLNVLAMEGQLDRMDEVVRISNKFM 362
            +IEAL +GR+ DK +++FSKMV+  C+PNEFTYS++LNVL  EGQL+++D +V +S K+M
Sbjct: 299  MIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYM 358

Query: 363  NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDKGDRDAYLSMLESLCNAGKVAEAIDML 542
            NK IYAY VRTLSKLGH+SEAHRLFCNMW+ HDKGD+DAY+SMLESLC++GK+AEAID+L
Sbjct: 359  NKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLL 418

Query: 543  SRTHEKGIITDTFMYNTVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRA 722
            +R HEK I TDT MYNTVF+ALG+ KQV H+ DLY+KMKQ+GP PDIFTYNILISS+GRA
Sbjct: 419  NRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRA 478

Query: 723  GRVEEAVRIFEELESSECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTY 902
            GRV+ AV+IFEELE+S C+PD+ISYNSLINCLGKNGD+DEAHMRFKEMQEKGLNPDVVTY
Sbjct: 479  GRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTY 538

Query: 903  STLIECFGKTDKIEMAYSLFNEMLAEGCCPNIVTYNILLDCFEKSGRSAEAVDLYSKLKE 1082
            STLIECFGKTDK+EMA SLF+EM+AEGC PN+VTYNILLDC E+SGR+AEAVDLY+KLK+
Sbjct: 539  STLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQ 598

Query: 1083 QGLTPDSITYAILEXXXXXXXXXXXXXXXNPITGWVVSPLR 1205
            QGLTPDSITYA+LE               NPITGWVVSPL+
Sbjct: 599  QGLTPDSITYAVLERLQSGRHGKLRVRRQNPITGWVVSPLQ 639



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 47/161 (29%), Positives = 86/161 (53%)
 Frame = +3

Query: 561  GIITDTFMYNTVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRAGRVEEA 740
            G+  + + Y  +     + +       +Y  M + G + DIF +N+L+ +  +  +V++A
Sbjct: 183  GLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKA 242

Query: 741  VRIFEELESSECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEKGLNPDVVTYSTLIEC 920
             ++FE+++   C PD  +Y  +I   GK G  DE+   F+ M EKG   +++ Y+T+IE 
Sbjct: 243  YKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEA 302

Query: 921  FGKTDKIEMAYSLFNEMLAEGCCPNIVTYNILLDCFEKSGR 1043
              K    + A  LF++M+  GC PN  TY++LL+     G+
Sbjct: 303  LAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQ 343



 Score = 94.4 bits (233), Expect = 7e-17
 Identities = 78/319 (24%), Positives = 141/319 (44%)
 Frame = +3

Query: 156  KPNSMTYNTLIEALVRGRLVDKILIVFSKMVDTNCRPNEFTYSLVLNVLAMEGQLDRMDE 335
            K +   YN L   L R     +     S + D   R  + + S V  ++   G LDR   
Sbjct: 118  KNDPFIYNRLFLTLSRSSSQLRFEQTESLLDDMEKRGVKGSISTVNILIGFFGDLDRCVG 177

Query: 336  VVRISNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDKGDRDAYLSMLESLCNAG 515
            +V+      N   Y  L++   +L    +A  ++ +M       D  A+  +L++L    
Sbjct: 178  LVKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQ 237

Query: 516  KVAEAIDMLSRTHEKGIITDTFMYNTVFSALGKSKQVPHLLDLYDKMKQEGPTPDIFTYN 695
            KV +A  +      +    DTF Y  +    GK+ +    L L+  M ++G T ++  YN
Sbjct: 238  KVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYN 297

Query: 696  ILISSFGRAGRVEEAVRIFEELESSECRPDIISYNSLINCLGKNGDLDEAHMRFKEMQEK 875
             +I +  +    ++AV +F ++  + C+P+  +Y+ L+N L   G L++      EM +K
Sbjct: 298  TMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLD-NIVEMSKK 356

Query: 876  GLNPDVVTYSTLIECFGKTDKIEMAYSLFNEMLAEGCCPNIVTYNILLDCFEKSGRSAEA 1055
             +N  +  Y+  +    K      A+ LF  M       +   Y  +L+    SG+ AEA
Sbjct: 357  YMNKQI--YAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEA 414

Query: 1056 VDLYSKLKEQGLTPDSITY 1112
            +DL ++  E+ +T D+I Y
Sbjct: 415  IDLLNRFHEKCITTDTIMY 433



 Score = 94.0 bits (232), Expect = 9e-17
 Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 32/215 (14%)
 Frame = +3

Query: 573  DTFMYNTVFSALGKSK---QVPHLLDLYDKMKQEGPTPDIFTYNILISSFGRAGRV---- 731
            D F+YN +F  L +S    +      L D M++ G    I T NILI  FG   R     
Sbjct: 120  DPFIYNRLFLTLSRSSSQLRFEQTESLLDDMEKRGVKGSISTVNILIGFFGDLDRCVGLV 179

Query: 732  -------------------------EEAVRIFEELESSECRPDIISYNSLINCLGKNGDL 836
                                     ++A  ++ ++       DI ++N L++ L K+  +
Sbjct: 180  KKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKV 239

Query: 837  DEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKIEMAYSLFNEMLAEGCCPNIVTYNIL 1016
            D+A+  F++M+ +   PD  TY+ +I   GK  K + + +LF  ML +G   N++ YN +
Sbjct: 240  DKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTM 299

Query: 1017 LDCFEKSGRSAEAVDLYSKLKEQGLTPDSITYAIL 1121
            ++   K   + +AV L+SK+ E G  P+  TY++L
Sbjct: 300  IEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVL 334