BLASTX nr result

ID: Scutellaria23_contig00016510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016510
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...   112   4e-23
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi...   110   2e-22
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...   105   3e-21
ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...   105   5e-21
ref|XP_003539331.1| PREDICTED: F-box protein SKIP2-like [Glycine...   104   7e-21

>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/67 (80%), Positives = 61/67 (91%)
 Frame = -2

Query: 202 GQSRHRLSLKAQAELADVIPRLFVRFDTVTKLALKCDRRSVSIGDDALVLISLKCRNLTR 23
           GQSRHRLSLKA+A+L+ +IP LF RFD VTKLALKCDRRS SI DD+L+LISL+CRNLTR
Sbjct: 87  GQSRHRLSLKAEADLSSMIPSLFTRFDAVTKLALKCDRRSTSIRDDSLILISLRCRNLTR 146

Query: 22  LKLRACR 2
           LKLRACR
Sbjct: 147 LKLRACR 153


>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
          Length = 541

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/67 (80%), Positives = 59/67 (88%)
 Frame = -2

Query: 202 GQSRHRLSLKAQAELADVIPRLFVRFDTVTKLALKCDRRSVSIGDDALVLISLKCRNLTR 23
           GQ+RHRLSL A ++L  V+P LF RFD VTKLALKCDRRSVSIGDDAL+LISL CRNLTR
Sbjct: 89  GQTRHRLSLNAHSDLLTVVPSLFSRFDAVTKLALKCDRRSVSIGDDALILISLGCRNLTR 148

Query: 22  LKLRACR 2
           LKLRACR
Sbjct: 149 LKLRACR 155


>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
           gi|222842891|gb|EEE80438.1| f-box family protein
           [Populus trichocarpa]
          Length = 533

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/67 (77%), Positives = 58/67 (86%)
 Frame = -2

Query: 202 GQSRHRLSLKAQAELADVIPRLFVRFDTVTKLALKCDRRSVSIGDDALVLISLKCRNLTR 23
           GQSRHRLSL AQ++L   +  LF RFD VTKLALKCDRRSVSIGD+ALV IS++CRNLTR
Sbjct: 86  GQSRHRLSLNAQSDLLPFVTSLFSRFDAVTKLALKCDRRSVSIGDEALVAISIRCRNLTR 145

Query: 22  LKLRACR 2
           LKLRACR
Sbjct: 146 LKLRACR 152


>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
           gi|222835491|gb|EEE73926.1| f-box family protein
           [Populus trichocarpa]
          Length = 534

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/67 (76%), Positives = 59/67 (88%)
 Frame = -2

Query: 202 GQSRHRLSLKAQAELADVIPRLFVRFDTVTKLALKCDRRSVSIGDDALVLISLKCRNLTR 23
           GQSRHRLSL AQ++L  ++P LF RFD+VTKLALKCDRRS SIGD+ALV IS +CRNLTR
Sbjct: 87  GQSRHRLSLNAQSDLLPLVPFLFSRFDSVTKLALKCDRRSTSIGDEALVAISSRCRNLTR 146

Query: 22  LKLRACR 2
           LKLR+CR
Sbjct: 147 LKLRSCR 153


>ref|XP_003539331.1| PREDICTED: F-box protein SKIP2-like [Glycine max]
          Length = 526

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/67 (76%), Positives = 56/67 (83%)
 Frame = -2

Query: 202 GQSRHRLSLKAQAELADVIPRLFVRFDTVTKLALKCDRRSVSIGDDALVLISLKCRNLTR 23
           GQ RHRLSL AQ EL D +P LF RFD+VTKLAL+CDR+  SI DDALVLISL+CRNLTR
Sbjct: 70  GQRRHRLSLNAQPELLDFVPSLFNRFDSVTKLALRCDRKCASINDDALVLISLRCRNLTR 129

Query: 22  LKLRACR 2
           LKLR CR
Sbjct: 130 LKLRGCR 136


Top