BLASTX nr result

ID: Scutellaria23_contig00016504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016504
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding prote...   194   1e-47
emb|CBI21312.3| unnamed protein product [Vitis vinifera]              194   1e-47
emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]   194   1e-47
ref|XP_002512890.1| double-stranded RNA binding protein, putativ...   179   6e-43
ref|XP_002877005.1| dsRNA-binding protein 3 [Arabidopsis lyrata ...   178   1e-42

>ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding protein 5 [Vitis vinifera]
          Length = 484

 Score =  194 bits (494), Expect = 1e-47
 Identities = 115/194 (59%), Positives = 130/194 (67%), Gaps = 9/194 (4%)
 Frame = -3

Query: 698 AEAALNSLSSRGPSKSLTARVLDETGVYKNLLQETAHRAGLKLPIYTTVRSGPGHVPVFT 519
           AE ALN LS+RGPS+SLTARVLDETGVYKNLLQETAHRAGL LP+YTTVRSGPGHVPVFT
Sbjct: 64  AEVALNVLSTRGPSRSLTARVLDETGVYKNLLQETAHRAGLNLPVYTTVRSGPGHVPVFT 123

Query: 518 STVELAGMSFSGEAAKTKKQAEKNAAIAAWSSLKRMPSLGPLSQTSKEMEQR-------R 360
            TVELAGM+F+GE+AKTKKQAEKNAAIAAWS+LKR+P+LG LS  SKE E R       R
Sbjct: 124 CTVELAGMNFTGESAKTKKQAEKNAAIAAWSALKRVPNLGSLSHLSKEAESREEQVVVAR 183

Query: 359 VNHNHHYHQXXXXXXXXXXRDQYHQTRGRMQRPQ--RGDINNLNSFALKRPWKFMDTFSD 186
           V  N    +           DQ +Q R RM R     G  +  N+    + W+ MD   D
Sbjct: 184 VLSN---FRSKDESRPIRRWDQ-NQARRRMVRGHGGSGSSSTSNNSQQFQKWRPMDLLMD 239

Query: 185 PSSETSHVQNHNNF 144
              E    QN N F
Sbjct: 240 SVPEGGTAQNQNCF 253


>emb|CBI21312.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  194 bits (494), Expect = 1e-47
 Identities = 115/194 (59%), Positives = 130/194 (67%), Gaps = 9/194 (4%)
 Frame = -3

Query: 698 AEAALNSLSSRGPSKSLTARVLDETGVYKNLLQETAHRAGLKLPIYTTVRSGPGHVPVFT 519
           AE ALN LS+RGPS+SLTARVLDETGVYKNLLQETAHRAGL LP+YTTVRSGPGHVPVFT
Sbjct: 61  AEVALNVLSTRGPSRSLTARVLDETGVYKNLLQETAHRAGLNLPVYTTVRSGPGHVPVFT 120

Query: 518 STVELAGMSFSGEAAKTKKQAEKNAAIAAWSSLKRMPSLGPLSQTSKEMEQR-------R 360
            TVELAGM+F+GE+AKTKKQAEKNAAIAAWS+LKR+P+LG LS  SKE E R       R
Sbjct: 121 CTVELAGMNFTGESAKTKKQAEKNAAIAAWSALKRVPNLGSLSHLSKEAESREEQVVVAR 180

Query: 359 VNHNHHYHQXXXXXXXXXXRDQYHQTRGRMQRPQ--RGDINNLNSFALKRPWKFMDTFSD 186
           V  N    +           DQ +Q R RM R     G  +  N+    + W+ MD   D
Sbjct: 181 VLSN---FRSKDESRPIRRWDQ-NQARRRMVRGHGGSGSSSTSNNSQQFQKWRPMDLLMD 236

Query: 185 PSSETSHVQNHNNF 144
              E    QN N F
Sbjct: 237 SVPEGGTAQNQNCF 250


>emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]
          Length = 552

 Score =  194 bits (494), Expect = 1e-47
 Identities = 115/194 (59%), Positives = 130/194 (67%), Gaps = 9/194 (4%)
 Frame = -3

Query: 698 AEAALNSLSSRGPSKSLTARVLDETGVYKNLLQETAHRAGLKLPIYTTVRSGPGHVPVFT 519
           AE ALN LS+RGPS+SLTARVLDETGVYKNLLQETAHRAGL LP+YTTVRSGPGHVPVFT
Sbjct: 132 AEVALNVLSTRGPSRSLTARVLDETGVYKNLLQETAHRAGLNLPVYTTVRSGPGHVPVFT 191

Query: 518 STVELAGMSFSGEAAKTKKQAEKNAAIAAWSSLKRMPSLGPLSQTSKEMEQR-------R 360
            TVELAGM+F+GE+AKTKKQAEKNAAIAAWS+LKR+P+LG LS  SKE E R       R
Sbjct: 192 CTVELAGMNFTGESAKTKKQAEKNAAIAAWSALKRVPNLGSLSHLSKEAESREEQVVVAR 251

Query: 359 VNHNHHYHQXXXXXXXXXXRDQYHQTRGRMQRPQ--RGDINNLNSFALKRPWKFMDTFSD 186
           V  N    +           DQ +Q R RM R     G  +  N+    + W+ MD   D
Sbjct: 252 VLSN---FRSKDESRPIRRWDQ-NQARRRMVRGHGGSGSSSTSNNSQQFQKWRPMDLLMD 307

Query: 185 PSSETSHVQNHNNF 144
              E    QN N F
Sbjct: 308 SVPEGGTAQNQNCF 321


>ref|XP_002512890.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223547901|gb|EEF49393.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 477

 Score =  179 bits (453), Expect = 6e-43
 Identities = 91/113 (80%), Positives = 101/113 (89%)
 Frame = -3

Query: 698 AEAALNSLSSRGPSKSLTARVLDETGVYKNLLQETAHRAGLKLPIYTTVRSGPGHVPVFT 519
           AE ALN LSSRGPS+SLTARVLDETG+YKNLLQETAHRAGL LP+YTT+RSGPGHVP FT
Sbjct: 64  AEVALNVLSSRGPSRSLTARVLDETGIYKNLLQETAHRAGLNLPVYTTIRSGPGHVPTFT 123

Query: 518 STVELAGMSFSGEAAKTKKQAEKNAAIAAWSSLKRMPSLGPLSQTSKEMEQRR 360
            TVELAGM+F+GE AKTKKQAEKNAAIAAWS+LKRMPSL  L  T+KE+ + R
Sbjct: 124 CTVELAGMNFTGEPAKTKKQAEKNAAIAAWSALKRMPSLDYL--TNKEVVESR 174


>ref|XP_002877005.1| dsRNA-binding protein 3 [Arabidopsis lyrata subsp. lyrata]
           gi|297322843|gb|EFH53264.1| dsRNA-binding protein 3
           [Arabidopsis lyrata subsp. lyrata]
          Length = 356

 Score =  178 bits (451), Expect = 1e-42
 Identities = 87/110 (79%), Positives = 99/110 (90%)
 Frame = -3

Query: 698 AEAALNSLSSRGPSKSLTARVLDETGVYKNLLQETAHRAGLKLPIYTTVRSGPGHVPVFT 519
           AE AL++LSS+GPSKSLTARVLDETG+YKNLLQETAHRAGL LP+YT+VRSGPGH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 518 STVELAGMSFSGEAAKTKKQAEKNAAIAAWSSLKRMPSLGPLSQTSKEME 369
            TVELAGMSF+GE+AKTKKQAEKNAAIAAW SL++MPSL PL    KE E
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPSLDPLRGEEKEQE 170


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