BLASTX nr result
ID: Scutellaria23_contig00016473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00016473
(1962 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 678 0.0
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,... 642 0.0
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,... 640 0.0
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 639 0.0
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-... 630 e-178
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 678 bits (1750), Expect = 0.0
Identities = 354/519 (68%), Positives = 421/519 (81%), Gaps = 3/519 (0%)
Frame = -3
Query: 1819 MGVVIVSSSAA--RTPLGLNARYLTRVSSLRRPVILSFKKDTVKKIALIAPIESVALPLE 1646
MGVV VSSSA+ RTP GLNA++ + LRRP++L+FK D K IAL+ P E + LP+E
Sbjct: 1 MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60
Query: 1645 ANKENQKGLRXXXXXXXXXXXVLTDEASPSTLDLDYNEAAAKLEYIFKQSPEKAVS-VDE 1469
+K+++K LR V TDE SP +++LDYNEAAAKLE I+K SP VS ++
Sbjct: 61 TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120
Query: 1468 VKDXXXXXXXXXXXRTVVIEEAEKETAENVVRSERKKDRRLNLEKRIALRMNKEGEFLAS 1289
++ T+ ++AEKE ++NVVR KK +RL+LEKRIAL K+ + +AS
Sbjct: 121 LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180
Query: 1288 SQKRRHNGNDEDEKTDRLVRNYSASTDLVSVDWKKMKIPSVLPSSEHTWLFELMQPMKAI 1109
QK+R + N EDE D LVR YSASTDLVS+DWKKMKIP VLP SEH WLF+LMQPMK +
Sbjct: 181 IQKKRDSKN-EDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239
Query: 1108 IRVKESIQNDLGRDLTDNELAEAIKMDVVQLRKQLKVGQAARNKMIKHNLRLVLFVMNKY 929
+ VK+++Q DLGR+ TD ELAEA+ M VQ+R+ ++VGQAARNK+IKHNLRLVLFV+NKY
Sbjct: 240 LEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKY 299
Query: 928 FQDFANGTRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAVVRSMTLSSFTKV 749
FQ+FANG +FQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHA++RSMTLSSFT+V
Sbjct: 300 FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRV 359
Query: 748 SFGLESVRMEIQRAKLELLFELHRLPTDEEITERVGISLERYNEVMRVSKPILSLHAKHA 569
SFGLESVR+EIQRAKLELLF+L RLPT+EEI E+VGIS ERY+EVMR SK +LSLHA+HA
Sbjct: 360 SFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHA 419
Query: 568 VTQEEFINVITDVDGVDGDKRRQPTLLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 389
TQEE+IN ITDV+GV GD+ RQ LLRLALDDVLDSLKPKESLV+RQRYGLDGKGDRTL
Sbjct: 420 TTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTL 479
Query: 388 GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF 272
GEIAGNL+ISREMVRKHEVKALMKLKHPARVDYLR+YIF
Sbjct: 480 GEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYIF 518
>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 514
Score = 642 bits (1655), Expect = 0.0
Identities = 336/519 (64%), Positives = 405/519 (78%), Gaps = 4/519 (0%)
Frame = -3
Query: 1819 MGVVIVSSSAARTPLGLNARYLTRVSSLRRPVILSFKKDTVKKIALIAPIESVALPLEAN 1640
MGVV VSS+AARTP L ++ S+L+RP I++FK D L++P E V LP+E+N
Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 1639 KENQKGLRXXXXXXXXXXXVLTDEASPSTLDLDYNEAAAKLEYIFKQSPEKAVSVDEVKD 1460
+K VL DEA+P +LDLDYNEAAAKLE IFK SP S E KD
Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120
Query: 1459 XXXXXXXXXXXRTVVIEEAEKETAENVVRSERKKDRRLNLEKRIALRMNKEGEFLASSQK 1280
+++ + +VR++ K+ +RL+L+KRIAL+ KEG+ +A +K
Sbjct: 121 GRSKRGQKRS------KKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRK 174
Query: 1279 RRHNGNDEDE----KTDRLVRNYSASTDLVSVDWKKMKIPSVLPSSEHTWLFELMQPMKA 1112
++ N+ DE + DRLVR+YSASTDLVS+DWKKMKIP VLPSSEHT LF+L+QPMKA
Sbjct: 175 QKDTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKA 234
Query: 1111 IIRVKESIQNDLGRDLTDNELAEAIKMDVVQLRKQLKVGQAARNKMIKHNLRLVLFVMNK 932
++ V+E +Q LGR+ T+ ELA A M+V+Q+R+QL+VG+AARNK+IKHNLRLVLFV+NK
Sbjct: 235 LVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINK 294
Query: 931 YFQDFANGTRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAVVRSMTLSSFTK 752
YF+DFA+G +FQDLCQAGVKGLITAIDRFEPKRKFRLSTY LFWIRHA++RSMTLSSFT+
Sbjct: 295 YFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTR 354
Query: 751 VSFGLESVRMEIQRAKLELLFELHRLPTDEEITERVGISLERYNEVMRVSKPILSLHAKH 572
VSFGL+SVR+EIQRAKLELL ELHRLPT+ EIT +VGIS ERY EVMR +KP+ SLH++H
Sbjct: 355 VSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRH 414
Query: 571 AVTQEEFINVITDVDGVDGDKRRQPTLLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 392
+ T EE IN ITDV+G GD RRQP LLRLALDDVLDSLKPKESLVIRQRYGLDGKG+RT
Sbjct: 415 STTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRT 474
Query: 391 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 275
LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 475 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 513
>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 515
Score = 640 bits (1652), Expect = 0.0
Identities = 337/521 (64%), Positives = 406/521 (77%), Gaps = 6/521 (1%)
Frame = -3
Query: 1819 MGVVIVSSSAARTPLGLNARYLTRVSSLRRPVILSFKKDTVKKIALIAPIESVALPLEAN 1640
MGVV VSS+AARTP L ++ S+L+RP I++FK D L++P E V LP+E+N
Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 1639 KENQKGLRXXXXXXXXXXXVLTDEASPSTLDLDYNEAAAKLEYIFKQSPEKAVSVDEVKD 1460
+K VL DEA+P +LDLDYNEAAAKLE IFK SP S E KD
Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120
Query: 1459 XXXXXXXXXXXRTVVIEEAEKETAENVVRSERKKDRRLNLEKRIALR------MNKEGEF 1298
+++ + +VR++ K+ +RL+L+KRIAL+ NKEG+
Sbjct: 121 GRSKRGQKRS------KKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKA 174
Query: 1297 LASSQKRRHNGNDEDEKTDRLVRNYSASTDLVSVDWKKMKIPSVLPSSEHTWLFELMQPM 1118
+ S +K++ N++DE DRLVR+YSASTDLVS+DWKKMKIP VLPSSEHT LF+L+QPM
Sbjct: 175 VPSLRKQKETKNEDDE-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPM 233
Query: 1117 KAIIRVKESIQNDLGRDLTDNELAEAIKMDVVQLRKQLKVGQAARNKMIKHNLRLVLFVM 938
KA++ V+E +Q LGR+ T+ ELA A M+V+Q+R+QL+VG+AARNK+IKHNLRLVLFV+
Sbjct: 234 KALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVI 293
Query: 937 NKYFQDFANGTRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAVVRSMTLSSF 758
NKYF+DFA+G +FQDLCQAGVKGLITAIDRFEPKRKFRLSTY LFWIRHA++RSMTLSSF
Sbjct: 294 NKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSF 353
Query: 757 TKVSFGLESVRMEIQRAKLELLFELHRLPTDEEITERVGISLERYNEVMRVSKPILSLHA 578
T+VSFGL+SVR+EIQRAKLELL ELHRLPT+ EIT +VGIS ERY EVMR +KP+ SLH+
Sbjct: 354 TRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHS 413
Query: 577 KHAVTQEEFINVITDVDGVDGDKRRQPTLLRLALDDVLDSLKPKESLVIRQRYGLDGKGD 398
+H+ T EE IN ITDV+G GD RRQP LLRLALDDVLDSLKPKESLVIRQRYGLDGKG+
Sbjct: 414 RHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGN 473
Query: 397 RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 275
RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 474 RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 514
>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 639 bits (1649), Expect = 0.0
Identities = 334/515 (64%), Positives = 402/515 (78%)
Frame = -3
Query: 1819 MGVVIVSSSAARTPLGLNARYLTRVSSLRRPVILSFKKDTVKKIALIAPIESVALPLEAN 1640
MGVV SSSAARTPLGL+ ++ T S+++R ++++FK+D I L+ P E LP+E +
Sbjct: 1 MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60
Query: 1639 KENQKGLRXXXXXXXXXXXVLTDEASPSTLDLDYNEAAAKLEYIFKQSPEKAVSVDEVKD 1460
K ++ E S TL++DYNEAAAKLE I+K SP S ++
Sbjct: 61 KGKKR------------RGKTNREVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDING 108
Query: 1459 XXXXXXXXXXXRTVVIEEAEKETAENVVRSERKKDRRLNLEKRIALRMNKEGEFLASSQK 1280
E+AE T+ +VR+ KK +RL+L+KRIAL+ N+E E + +K
Sbjct: 109 LIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRK 168
Query: 1279 RRHNGNDEDEKTDRLVRNYSASTDLVSVDWKKMKIPSVLPSSEHTWLFELMQPMKAIIRV 1100
++ + D++EK + LVR YSAST+LVS+DW+KMKIP VLPS+EH WLF+LMQPMK ++ V
Sbjct: 169 KK-DSKDDNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPV 227
Query: 1099 KESIQNDLGRDLTDNELAEAIKMDVVQLRKQLKVGQAARNKMIKHNLRLVLFVMNKYFQD 920
K +Q +LGRD TD ELAEA M+V ++RKQL+VG+AARNK+IKHNLRLV+FVMNKYFQD
Sbjct: 228 KADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQD 287
Query: 919 FANGTRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAVVRSMTLSSFTKVSFG 740
FANG RFQDLCQAGVKGLITAIDRFEP+R+F+LSTY LFWIRHA++RSMTLSSFTKVSFG
Sbjct: 288 FANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFG 347
Query: 739 LESVRMEIQRAKLELLFELHRLPTDEEITERVGISLERYNEVMRVSKPILSLHAKHAVTQ 560
LESVR EIQ+AKLELL EL R PT+EEI ERVGIS ERY+EV+R +KP LSLHA+HAVTQ
Sbjct: 348 LESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQ 407
Query: 559 EEFINVITDVDGVDGDKRRQPTLLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 380
EEFIN ITD+DG GD RRQP LLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
Sbjct: 408 EEFINGITDIDG--GDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 465
Query: 379 AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 275
AGNLNISREMVRK+EVKALMKLKHPARVDYLRRY+
Sbjct: 466 AGNLNISREMVRKYEVKALMKLKHPARVDYLRRYV 500
>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
Length = 512
Score = 630 bits (1625), Expect = e-178
Identities = 327/515 (63%), Positives = 404/515 (78%)
Frame = -3
Query: 1819 MGVVIVSSSAARTPLGLNARYLTRVSSLRRPVILSFKKDTVKKIALIAPIESVALPLEAN 1640
MGV+ VS+SAARTPL LN R ++ +RP+IL+FK + K L++P E + LPLE
Sbjct: 1 MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60
Query: 1639 KENQKGLRXXXXXXXXXXXVLTDEASPSTLDLDYNEAAAKLEYIFKQSPEKAVSVDEVKD 1460
K++QK + V T E SP TLD+DYNEAAAKLE I+K SP V+D
Sbjct: 61 KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTC--NVED 118
Query: 1459 XXXXXXXXXXXRTVVIEEAEKETAENVVRSERKKDRRLNLEKRIALRMNKEGEFLASSQK 1280
R V EE + +NVVR++ KK +RL+L+KRIAL+ N + E + +QK
Sbjct: 119 IDSKIERVLRRRKKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQK 178
Query: 1279 RRHNGNDEDEKTDRLVRNYSASTDLVSVDWKKMKIPSVLPSSEHTWLFELMQPMKAIIRV 1100
+R N + + D L+R+YSASTDLVS+DWKKMKIP VLPSSEH WLF+LMQPMKA+++
Sbjct: 179 KR-NVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQA 237
Query: 1099 KESIQNDLGRDLTDNELAEAIKMDVVQLRKQLKVGQAARNKMIKHNLRLVLFVMNKYFQD 920
KE ++ ++ +++T ELA+A M ++Q+RK ++VG+AARNK+IKHNLRLVLFV+NKYFQD
Sbjct: 238 KEDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQD 296
Query: 919 FANGTRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAVVRSMTLSSFTKVSFG 740
FA+G RFQDLCQAGVKGLITAIDRFEPKR+ +LSTY LFWIRH++VRS+TLSSFT+V FG
Sbjct: 297 FASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFG 356
Query: 739 LESVRMEIQRAKLELLFELHRLPTDEEITERVGISLERYNEVMRVSKPILSLHAKHAVTQ 560
LE VR++IQR KL+L FEL R PT+EE+ ER+GISLERY+EVM+ SKPILSLH++H TQ
Sbjct: 357 LERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQ 416
Query: 559 EEFINVITDVDGVDGDKRRQPTLLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 380
EE+IN ITDVDGV+GD RRQ +LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
Sbjct: 417 EEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 476
Query: 379 AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 275
AGNLNISRE+VRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 477 AGNLNISREIVRKHEVKALMKLKHPARLDYLRRYV 511