BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016287
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ38374.1| transcription initiation factor [Plantago major]      209   6e-52
emb|CBI19296.3| unnamed protein product [Vitis vinifera]              188   1e-45
ref|XP_002527359.1| transcription initiation factor iia (tfiia),...   186   5e-45
ref|NP_194175.1| transcription initiation factor IIA subunit 2 [...   185   9e-45
ref|XP_002285630.1| PREDICTED: transcription initiation factor I...   185   1e-44

>emb|CAJ38374.1| transcription initiation factor [Plantago major]
          Length = 114

 Score =  209 bits (532), Expect = 6e-52
 Identities = 105/110 (95%), Positives = 109/110 (99%)
 Frame = -3

Query: 628 IGERMATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSMTEALESEVKSK 449
           IG+ MATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSMTEALESEVKSK
Sbjct: 5   IGKTMATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSMTEALESEVKSK 64

Query: 448 VSIKGHLHTYRFCDNVWTFILQNAQLKSEEGQETVDSVKIVACDSKLLTQ 299
           VSIKGHLHTYRFCDNVWTFI+QNAQLKSEEGQETV++VKIVACDSKLLTQ
Sbjct: 65  VSIKGHLHTYRFCDNVWTFIVQNAQLKSEEGQETVETVKIVACDSKLLTQ 114


>emb|CBI19296.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  188 bits (477), Expect = 1e-45
 Identities = 95/113 (84%), Positives = 102/113 (90%)
 Frame = -3

Query: 637 SISIGERMATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSMTEALESEV 458
           S SI  RMATFELYRRSTIGMCLTETLD+MV +G LSPELAIQVL+QFDKSMTEALES+V
Sbjct: 51  SPSIIVRMATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQV 110

Query: 457 KSKVSIKGHLHTYRFCDNVWTFILQNAQLKSEEGQETVDSVKIVACDSKLLTQ 299
           KSKV+IKGHLHTYRFCDNVWTFILQ+A  K+EE QE V  VKIVACDSKLLTQ
Sbjct: 111 KSKVTIKGHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ 163


>ref|XP_002527359.1| transcription initiation factor iia (tfiia), gamma chain, putative
           [Ricinus communis] gi|223533278|gb|EEF35031.1|
           transcription initiation factor iia (tfiia), gamma
           chain, putative [Ricinus communis]
          Length = 106

 Score =  186 bits (472), Expect = 5e-45
 Identities = 92/106 (86%), Positives = 98/106 (92%)
 Frame = -3

Query: 616 MATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSMTEALESEVKSKVSIK 437
           MATFELYRRSTIGMCLTETLD+MV SG LSPELAIQVL+QFDKSMTEALES+VKSKVSIK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIK 60

Query: 436 GHLHTYRFCDNVWTFILQNAQLKSEEGQETVDSVKIVACDSKLLTQ 299
           GHLHTYRFCDNVWTFILQ+A  K+E+ QE V  VKIVACDSKLLTQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 106


>ref|NP_194175.1| transcription initiation factor IIA subunit 2 [Arabidopsis
           thaliana] gi|30686529|ref|NP_849434.1| transcription
           initiation factor IIA subunit 2 [Arabidopsis thaliana]
           gi|297803670|ref|XP_002869719.1| transcription
           initiation factor IIA gamma chain [Arabidopsis lyrata
           subsp. lyrata] gi|20141796|sp|Q39236.2|T2AG_ARATH
           RecName: Full=Transcription initiation factor IIA
           subunit 2; AltName: Full=General transcription factor
           IIA subunit 2; AltName: Full=Transcription initiation
           factor IIA gamma chain; Short=TFIIA-gamma
           gi|2826882|emb|CAA11524.1| transcription factor IIA
           small subunit [Arabidopsis thaliana]
           gi|5051786|emb|CAB45079.1| transcription factor IIA
           small subunit [Arabidopsis thaliana]
           gi|7269294|emb|CAB79354.1| transcription factor IIA
           small subunit [Arabidopsis thaliana]
           gi|18176271|gb|AAL60014.1| putative transcription factor
           IIA small subunit [Arabidopsis thaliana]
           gi|20465319|gb|AAM20063.1| putative transcription factor
           IIA small subunit [Arabidopsis thaliana]
           gi|21553865|gb|AAM62958.1| transcription factor IIA
           small subunit [Arabidopsis thaliana]
           gi|39545876|gb|AAR28001.1| TFIIA-S [Arabidopsis
           thaliana] gi|222424034|dbj|BAH19978.1| AT4G24440
           [Arabidopsis thaliana] gi|297315555|gb|EFH45978.1|
           transcription initiation factor IIA gamma chain
           [Arabidopsis lyrata subsp. lyrata]
           gi|332659504|gb|AEE84904.1| transcription initiation
           factor IIA subunit 2 [Arabidopsis thaliana]
           gi|332659505|gb|AEE84905.1| transcription initiation
           factor IIA subunit 2 [Arabidopsis thaliana]
          Length = 106

 Score =  185 bits (470), Expect = 9e-45
 Identities = 91/106 (85%), Positives = 98/106 (92%)
 Frame = -3

Query: 616 MATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSMTEALESEVKSKVSIK 437
           MATFELYRRSTIGMCLTETLD+MV SG LSPELAIQVL+QFDKSMTEALES+VK+KVSIK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIK 60

Query: 436 GHLHTYRFCDNVWTFILQNAQLKSEEGQETVDSVKIVACDSKLLTQ 299
           GHLHTYRFCDNVWTFILQ+A  KS++ QE V  VKIVACDSKLLTQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDAMFKSDDRQENVSRVKIVACDSKLLTQ 106


>ref|XP_002285630.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
           [Vitis vinifera] gi|359492969|ref|XP_003634490.1|
           PREDICTED: transcription initiation factor IIA subunit 2
           isoform 2 [Vitis vinifera] gi|147775910|emb|CAN60284.1|
           hypothetical protein VITISV_015528 [Vitis vinifera]
          Length = 106

 Score =  185 bits (469), Expect = 1e-44
 Identities = 91/106 (85%), Positives = 98/106 (92%)
 Frame = -3

Query: 616 MATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSMTEALESEVKSKVSIK 437
           MATFELYRRSTIGMCLTETLD+MV +G LSPELAIQVL+QFDKSMTEALES+VKSKV+IK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60

Query: 436 GHLHTYRFCDNVWTFILQNAQLKSEEGQETVDSVKIVACDSKLLTQ 299
           GHLHTYRFCDNVWTFILQ+A  K+EE QE V  VKIVACDSKLLTQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ 106