BLASTX nr result

ID: Scutellaria23_contig00016200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016200
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39748.3| unnamed protein product [Vitis vinifera]              134   8e-30
ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PAR...   134   8e-30
ref|XP_002891857.1| Poly(A)-specific ribonuclease [Arabidopsis l...   133   1e-29
ref|XP_002522771.1| conserved hypothetical protein [Ricinus comm...   132   2e-29
ref|NP_001077725.4| Poly(A)-specific ribonuclease PARN [Arabidop...   132   3e-29

>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/130 (50%), Positives = 94/130 (72%), Gaps = 5/130 (3%)
 Frame = +1

Query: 1   NMLLLWGPPAQLKAENIKDCLSRVFGASSIIRIYHLDESAVFVYFSKPHLVSDFIELKNS 180
           N++++WG P+QL ++ I++C+S+ FG  S+  IYHLDE+AVFV FSKP LV+DF+ LK +
Sbjct: 542 NIVIVWGFPSQLSSKKIRECISKAFGPISVTTIYHLDETAVFVQFSKPELVADFLVLKET 601

Query: 181 LERDNGPISALHPLSKILEGGRVRAATYEMYKEVCCSRECKLLFADQAEVVVGVN----- 345
           LE    PIS LHPLS +LEGG   AA+YE YKE+C S   K++FADQA+  VG+      
Sbjct: 602 LETIQDPISVLHPLSVLLEGGNTCAASYETYKEICSSPISKVMFADQAK-AVGIKWKTKL 660

Query: 346 VEEQKRINTR 375
           +E ++++ T+
Sbjct: 661 IESKEKVKTQ 670


>ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 734

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/130 (50%), Positives = 94/130 (72%), Gaps = 5/130 (3%)
 Frame = +1

Query: 1   NMLLLWGPPAQLKAENIKDCLSRVFGASSIIRIYHLDESAVFVYFSKPHLVSDFIELKNS 180
           N++++WG P+QL ++ I++C+S+ FG  S+  IYHLDE+AVFV FSKP LV+DF+ LK +
Sbjct: 542 NIVIVWGFPSQLSSKKIRECISKAFGPISVTTIYHLDETAVFVQFSKPELVADFLVLKET 601

Query: 181 LERDNGPISALHPLSKILEGGRVRAATYEMYKEVCCSRECKLLFADQAEVVVGVN----- 345
           LE    PIS LHPLS +LEGG   AA+YE YKE+C S   K++FADQA+  VG+      
Sbjct: 602 LETIQDPISVLHPLSVLLEGGNTCAASYETYKEICSSPISKVMFADQAK-AVGIKWKTKL 660

Query: 346 VEEQKRINTR 375
           +E ++++ T+
Sbjct: 661 IESKEKVKTQ 670


>ref|XP_002891857.1| Poly(A)-specific ribonuclease [Arabidopsis lyrata subsp. lyrata]
           gi|297337699|gb|EFH68116.1| Poly(A)-specific
           ribonuclease [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/111 (54%), Positives = 80/111 (72%)
 Frame = +1

Query: 1   NMLLLWGPPAQLKAENIKDCLSRVFGASSIIRIYHLDESAVFVYFSKPHLVSDFIELKNS 180
           N++L+W  P +LKA  IK+C+ + FG++S+  +YH+D+SAVFV F    LV DF+ LK  
Sbjct: 531 NIVLIWNFPRKLKAREIKECICKAFGSASVTSVYHVDDSAVFVLFKNSELVWDFLTLKRQ 590

Query: 181 LERDNGPISALHPLSKILEGGRVRAATYEMYKEVCCSRECKLLFADQAEVV 333
           LE  +GP+S LHPLSKILEGG   AA YE YKE+C S   K+LF+DQAE V
Sbjct: 591 LESSDGPVSVLHPLSKILEGGNTGAADYEAYKEICSSNISKILFSDQAETV 641


>ref|XP_002522771.1| conserved hypothetical protein [Ricinus communis]
           gi|223538009|gb|EEF39622.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 699

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/135 (49%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
 Frame = +1

Query: 1   NMLLLWGPPAQLKAENIKDCLSRVFGASSIIRIYHLDESAVFVYFSKPHLVSDFIELKNS 180
           N++L+W  P++LKA  I++C+ + FG +S+  IYH+DE+AVFV FSK  LVS+F+ LK S
Sbjct: 512 NIVLIWRFPSRLKAGEIRECICKAFGLNSVTSIYHVDETAVFVQFSKAELVSEFLVLKES 571

Query: 181 LERDNGPISALHPLSKILEGGRVRAATYEMYKEVCCSRECKLLFADQAEVVVGVNVEE-- 354
           L+R N PIS LHPLSK+L+GG   AA YE YKE+C S   K+ FADQA   VG+N +   
Sbjct: 572 LDRSNDPISVLHPLSKLLDGGNTCAADYETYKEICSSPISKVRFADQA-AAVGINWKTKL 630

Query: 355 -QKRINTRASCSDRF 396
            + +I+  +   D F
Sbjct: 631 VESKIDAESQHQDSF 645


>ref|NP_001077725.4| Poly(A)-specific ribonuclease PARN [Arabidopsis thaliana]
           gi|78484002|dbj|BAE47490.1| polyA specific ribonuclease
           [Arabidopsis thaliana] gi|332195191|gb|AEE33312.1|
           Poly(A)-specific ribonuclease PARN [Arabidopsis
           thaliana]
          Length = 540

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/131 (48%), Positives = 87/131 (66%)
 Frame = +1

Query: 1   NMLLLWGPPAQLKAENIKDCLSRVFGASSIIRIYHLDESAVFVYFSKPHLVSDFIELKNS 180
           N++L+W  P +LKA  IK+C+ + FG++S+  +YH+D+SAVFV F    LV DF+ LK  
Sbjct: 382 NIVLIWNFPRKLKARGIKECICKAFGSASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQ 441

Query: 181 LERDNGPISALHPLSKILEGGRVRAATYEMYKEVCCSRECKLLFADQAEVVVGVNVEEQK 360
           LE  +GP+S LHPLSKILEGG   AA YE YKE+C S   +++F+DQAE    V V+ + 
Sbjct: 442 LESSDGPVSVLHPLSKILEGGNTGAADYEAYKEICSSHVSEVMFSDQAET---VGVKSRT 498

Query: 361 RINTRASCSDR 393
           R N +     R
Sbjct: 499 RPNAQCETETR 509


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