BLASTX nr result

ID: Scutellaria23_contig00016192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016192
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   159   2e-37
ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...   154   7e-36
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35

>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  159 bits (402), Expect = 2e-37
 Identities = 74/133 (55%), Positives = 103/133 (77%)
 Frame = -1

Query: 400 SQLIHLCKTGSISDAIALLSSVNSSLHLQNVVSKPILYATIVHACTRSLHFTLGLQLHSH 221
           S+++ LCK+G +S A+ LL S++       + +KP+LYA+++  CT+ L F  GLQ+H+H
Sbjct: 29  SKILQLCKSGELSGALQLLKSIDPG----EISAKPVLYASLLQTCTKVLAFNHGLQIHAH 84

Query: 220 LIKSGLETDRFVGNSILALYFKLGSDFNDTRKFFDGLRYKDVVSWSSMISGYIRVGKSRN 41
           +IKSGLE DRFVGNS+L LYFKLG+DF +TRK FDGL  KDV+SW+SMISGY+RVGK  N
Sbjct: 85  VIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMN 144

Query: 40  AIELFFDMMNVGI 2
           ++ELF+ M+  G+
Sbjct: 145 SLELFWKMLAYGV 157


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  159 bits (402), Expect = 2e-37
 Identities = 74/133 (55%), Positives = 103/133 (77%)
 Frame = -1

Query: 400 SQLIHLCKTGSISDAIALLSSVNSSLHLQNVVSKPILYATIVHACTRSLHFTLGLQLHSH 221
           S+++ LCK+G +S A+ LL S++       + +KP+LYA+++  CT+ L F  GLQ+H+H
Sbjct: 88  SKILQLCKSGELSGALQLLKSIDPG----EISAKPVLYASLLQTCTKVLAFNHGLQIHAH 143

Query: 220 LIKSGLETDRFVGNSILALYFKLGSDFNDTRKFFDGLRYKDVVSWSSMISGYIRVGKSRN 41
           +IKSGLE DRFVGNS+L LYFKLG+DF +TRK FDGL  KDV+SW+SMISGY+RVGK  N
Sbjct: 144 VIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMN 203

Query: 40  AIELFFDMMNVGI 2
           ++ELF+ M+  G+
Sbjct: 204 SLELFWKMLAYGV 216


>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
           gi|449493172|ref|XP_004159212.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  156 bits (394), Expect = 2e-36
 Identities = 81/155 (52%), Positives = 111/155 (71%), Gaps = 4/155 (2%)
 Frame = -1

Query: 454 RHC----TSLAHTHYTHCQSVPSQLIHLCKTGSISDAIALLSSVNSSLHLQNVVSKPILY 287
           RHC    TS    + TH     SQ++  CK+G ++DA+ LL+S++      + ++KP+LY
Sbjct: 7   RHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDL---YDSRINKPLLY 63

Query: 286 ATIVHACTRSLHFTLGLQLHSHLIKSGLETDRFVGNSILALYFKLGSDFNDTRKFFDGLR 107
           A+++  C +   FT G Q H+H++KSGLETDRFVGNS+L+LYFKLGSD   TR+ FDGL 
Sbjct: 64  ASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLF 123

Query: 106 YKDVVSWSSMISGYIRVGKSRNAIELFFDMMNVGI 2
            KDVVSW+SMI+GY+R GKS  AIELF+DM++ GI
Sbjct: 124 VKDVVSWASMITGYVREGKSGIAIELFWDMLDSGI 158



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/96 (31%), Positives = 53/96 (55%)
 Frame = -1

Query: 289 YATIVHACTRSLHFTLGLQLHSHLIKSGLETDRFVGNSILALYFKLGSDFNDTRKFFDGL 110
           + T++ AC      T G ++H   I+ G   D  V ++++ LY K G   N   + FD +
Sbjct: 364 FGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGC-INFAYRVFDRM 422

Query: 109 RYKDVVSWSSMISGYIRVGKSRNAIELFFDMMNVGI 2
             +++++W+SMI G+ + G S  AI++F  M+  GI
Sbjct: 423 PTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGI 458


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  154 bits (389), Expect = 7e-36
 Identities = 69/147 (46%), Positives = 112/147 (76%), Gaps = 8/147 (5%)
 Frame = -1

Query: 418 HCQSVPS--------QLIHLCKTGSISDAIALLSSVNSSLHLQNVVSKPILYATIVHACT 263
           HC S+PS        ++I  CK+G++  A+ +L+S++S    + + +KP +YA+++  CT
Sbjct: 7   HCSSLPSFNLKNKEIKIIGFCKSGALLHALDILNSIDS----REISNKPFIYASLLQTCT 62

Query: 262 RSLHFTLGLQLHSHLIKSGLETDRFVGNSILALYFKLGSDFNDTRKFFDGLRYKDVVSWS 83
           + + F  GLQ+H+H++KSGLETDRFVGNS+LALYFKL +DF +TR+ FDGL ++DV+SW+
Sbjct: 63  KVVSFNHGLQIHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETRRVFDGLYFRDVISWT 122

Query: 82  SMISGYIRVGKSRNAIELFFDMMNVGI 2
           SMI+GY++  K + A++LF++M++VG+
Sbjct: 123 SMITGYVKGEKPKKALDLFWEMLDVGV 149


>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/158 (47%), Positives = 115/158 (72%), Gaps = 3/158 (1%)
 Frame = -1

Query: 466 LSSIRHCTSLAHTHYT---HCQSVPSQLIHLCKTGSISDAIALLSSVNSSLHLQNVVSKP 296
           LSS RH ++LA  +     + QS   ++I  CK+GS+ +AI +L+S++ +     + +KP
Sbjct: 5   LSSQRHYSTLASLNLKTLENPQSKAYKIIQYCKSGSLFEAIHVLNSIDWT----RLSNKP 60

Query: 295 ILYATIVHACTRSLHFTLGLQLHSHLIKSGLETDRFVGNSILALYFKLGSDFNDTRKFFD 116
             YA+++  CT+++ FT G+Q HSH IKSGL+TDRFVGNS+LALYFKLG +  + R+ FD
Sbjct: 61  FFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFD 120

Query: 115 GLRYKDVVSWSSMISGYIRVGKSRNAIELFFDMMNVGI 2
           GL YKD++SW+SMI+GY++V K + ++ELF +M+ +GI
Sbjct: 121 GLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGI 158


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