BLASTX nr result

ID: Scutellaria23_contig00016064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016064
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517032.1| pentatricopeptide repeat-containing protein,...   164   5e-39
ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
emb|CBI26347.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_002885540.1| pentatricopeptide repeat-containing protein ...   159   3e-37
ref|NP_188942.1| pentatricopeptide repeat-containing protein [Ar...   157   7e-37

>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 875

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/107 (71%), Positives = 90/107 (84%)
 Frame = -3

Query: 324 RMYIGAGLIEKSWSWFERFHLRGNMTSECYSANIDAYGERGYTSEAQKVFDSCLQVNKVT 145
           RMYI AG++EKSW WF RFHL GNM+SECYSANIDAYGERG+  EA +VF   L+ NK+T
Sbjct: 478 RMYIEAGMLEKSWLWFWRFHLAGNMSSECYSANIDAYGERGHVKEAARVFACRLEQNKLT 537

Query: 144 VLEFNVMIKAYGISRKFEQACLLFDSMEKHGLVPDRCGYNSLVQMLA 4
           VLEFNVMIKAYG  + +E+AC LFDSME HG+VPD+C Y+SLVQ+LA
Sbjct: 538 VLEFNVMIKAYGFGKNYEKACDLFDSMESHGVVPDKCSYSSLVQILA 584


>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
           [Vitis vinifera]
          Length = 881

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/107 (67%), Positives = 89/107 (83%)
 Frame = -3

Query: 324 RMYIGAGLIEKSWSWFERFHLRGNMTSECYSANIDAYGERGYTSEAQKVFDSCLQVNKVT 145
           RMYI AG+++KSW WF RFHL GNM+SECYSANIDAYGERG+  EA+K F  C +  K++
Sbjct: 473 RMYIEAGMLKKSWLWFRRFHLEGNMSSECYSANIDAYGERGHILEAEKAFLCCKESRKLS 532

Query: 144 VLEFNVMIKAYGISRKFEQACLLFDSMEKHGLVPDRCGYNSLVQMLA 4
           VLEFNVMIKAYGIS ++E+AC L DSME HG++PD+  YNSL+Q+LA
Sbjct: 533 VLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILA 579


>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/107 (67%), Positives = 89/107 (83%)
 Frame = -3

Query: 324 RMYIGAGLIEKSWSWFERFHLRGNMTSECYSANIDAYGERGYTSEAQKVFDSCLQVNKVT 145
           RMYI AG+++KSW WF RFHL GNM+SECYSANIDAYGERG+  EA+K F  C +  K++
Sbjct: 454 RMYIEAGMLKKSWLWFRRFHLEGNMSSECYSANIDAYGERGHILEAEKAFLCCKESRKLS 513

Query: 144 VLEFNVMIKAYGISRKFEQACLLFDSMEKHGLVPDRCGYNSLVQMLA 4
           VLEFNVMIKAYGIS ++E+AC L DSME HG++PD+  YNSL+Q+LA
Sbjct: 514 VLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILA 560


>ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331380|gb|EFH61799.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 841

 Score =  159 bits (401), Expect = 3e-37
 Identities = 74/107 (69%), Positives = 91/107 (85%)
 Frame = -3

Query: 324 RMYIGAGLIEKSWSWFERFHLRGNMTSECYSANIDAYGERGYTSEAQKVFDSCLQVNKVT 145
           RMYI A ++EKSWSWF+RFH+ GNM+SE YSANIDAYGERGY SEA++VF  C +VNK T
Sbjct: 444 RMYIEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRT 503

Query: 144 VLEFNVMIKAYGISRKFEQACLLFDSMEKHGLVPDRCGYNSLVQMLA 4
           VLE+NVMIKAYGIS+  E+AC LF+SM  +G+ PD+C YN+LVQ+LA
Sbjct: 504 VLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILA 550


>ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g23020 gi|9294191|dbj|BAB02093.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332643185|gb|AEE76706.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 842

 Score =  157 bits (398), Expect = 7e-37
 Identities = 72/107 (67%), Positives = 91/107 (85%)
 Frame = -3

Query: 324 RMYIGAGLIEKSWSWFERFHLRGNMTSECYSANIDAYGERGYTSEAQKVFDSCLQVNKVT 145
           RMY+ A ++EKSWSWF+RFH+ GNM+SE YSANIDAYGERGY SEA++VF  C +VNK T
Sbjct: 445 RMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRT 504

Query: 144 VLEFNVMIKAYGISRKFEQACLLFDSMEKHGLVPDRCGYNSLVQMLA 4
           V+E+NVMIKAYGIS+  E+AC LF+SM  +G+ PD+C YN+LVQ+LA
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILA 551


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