BLASTX nr result

ID: Scutellaria23_contig00016061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00016061
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272754.1| PREDICTED: uncharacterized protein LOC100257...   112   2e-22
emb|CBI23070.3| unnamed protein product [Vitis vinifera]              105   3e-20
ref|NP_563619.1| GRF1-interacting factor 2 [Arabidopsis thaliana...    96   2e-17
ref|NP_567194.1| GRF1-interacting factor 3 [Arabidopsis thaliana...    92   2e-16
gb|AAB62864.1| contains region of similarity to SYT [Arabidopsis...    92   2e-16

>ref|XP_002272754.1| PREDICTED: uncharacterized protein LOC100257141 [Vitis vinifera]
          Length = 198

 Score =  112 bits (280), Expect = 2e-22
 Identities = 81/201 (40%), Positives = 93/201 (46%)
 Frame = -3

Query: 894 MQQQAAPTMNTAPSTPLNLVSTEQIQKYLDENKNLIMAILECQKTGKVAECAQYQAILQK 715
           MQQQ    MN APS P   ++TEQIQKYLDENK LI+AILE Q  GK+AECAQYQA LQK
Sbjct: 1   MQQQPPQMMNIAPSFPPTAITTEQIQKYLDENKQLILAILENQNLGKLAECAQYQAQLQK 60

Query: 714 NLMYLAAIADXXXXXXXXXXXXXXXXXXXQGDSRMLQTHASTVXXXXXXXXXXXXXPKLP 535
           NL+YLAAIAD                   QG        A+                KLP
Sbjct: 61  NLIYLAAIADAQPPAPTVPPQMPIHHAMQQGHYMQHPQAAAA------QQQPGMFGAKLP 114

Query: 534 FQLNALRPXXXXXXXXXXXXXXXXQGHFSXXXXXXXXXXXLMHPGVGNSGNLMDLRGNQS 355
           FQL+  +                 QG               M  G+G    LMD+RG++ 
Sbjct: 115 FQLSD-QQQQQQHHLLHLQQQQPIQGLMGMRPIINNGMHQAMQTGLGALSGLMDVRGSKP 173

Query: 354 GGLEASSGDCQGNSALGRVEG 292
            G E  SGD QG SA G   G
Sbjct: 174 DGSEVGSGDGQGKSASGHGSG 194


>emb|CBI23070.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score =  105 bits (261), Expect = 3e-20
 Identities = 76/189 (40%), Positives = 88/189 (46%)
 Frame = -3

Query: 870 MNTAPSTPLNLVSTEQIQKYLDENKNLIMAILECQKTGKVAECAQYQAILQKNLMYLAAI 691
           MN APS P   ++TEQIQKYLDENK LI+AILE Q  GK+AECAQYQA LQKNL+YLAAI
Sbjct: 2   MNIAPSFPPTAITTEQIQKYLDENKQLILAILENQNLGKLAECAQYQAQLQKNLIYLAAI 61

Query: 690 ADXXXXXXXXXXXXXXXXXXXQGDSRMLQTHASTVXXXXXXXXXXXXXPKLPFQLNALRP 511
           AD                   QG        A+                KLPFQL+  + 
Sbjct: 62  ADAQPPAPTVPPQMPIHHAMQQGHYMQHPQAAAA------QQQPGMFGAKLPFQLSD-QQ 114

Query: 510 XXXXXXXXXXXXXXXXQGHFSXXXXXXXXXXXLMHPGVGNSGNLMDLRGNQSGGLEASSG 331
                           QG               M  G+G    LMD+RG++  G E  SG
Sbjct: 115 QQQQHHLLHLQQQQPIQGLMGMRPIINNGMHQAMQTGLGALSGLMDVRGSKPDGSEVGSG 174

Query: 330 DCQGNSALG 304
           D QG SA G
Sbjct: 175 DGQGKSASG 183


>ref|NP_563619.1| GRF1-interacting factor 2 [Arabidopsis thaliana]
           gi|75192332|sp|Q9MAL9.1|GIF2_ARATH RecName:
           Full=GRF1-interacting factor 2; Short=AtGIF2; AltName:
           Full=Transcription coactivator GIF2
           gi|6715636|gb|AAF26463.1|AC007323_4 T25K16.15
           [Arabidopsis thaliana]
           gi|15294232|gb|AAK95293.1|AF410307_1 At1g01160/F6F3_1
           [Arabidopsis thaliana] gi|20857112|gb|AAM26700.1|
           At1g01160/F6F3_1 [Arabidopsis thaliana]
           gi|21539892|gb|AAM52882.1| GRF1-interacting factor 2
           [Arabidopsis thaliana] gi|332189126|gb|AEE27247.1|
           GRF1-interacting factor 2 [Arabidopsis thaliana]
          Length = 195

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 52/72 (72%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
 Frame = -3

Query: 894 MQQQAAPTM-NTAPSTP-LNLVSTEQIQKYLDENKNLIMAILECQKTGKVAECAQYQAIL 721
           MQQQ +P M    PS P  N ++TEQIQKYLDENK LIMAI+E Q  GK+AECAQYQA+L
Sbjct: 1   MQQQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALL 60

Query: 720 QKNLMYLAAIAD 685
           QKNLMYLAAIAD
Sbjct: 61  QKNLMYLAAIAD 72


>ref|NP_567194.1| GRF1-interacting factor 3 [Arabidopsis thaliana]
           gi|75163154|sp|Q93VH6.1|GIF3_ARATH RecName:
           Full=GRF1-interacting factor 3; Short=AtGIF3; AltName:
           Full=Transcription coactivator GIF3
           gi|14190377|gb|AAK55669.1|AF378866_1
           AT4g00850/A_TM018A10_22 [Arabidopsis thaliana]
           gi|15450537|gb|AAK96446.1| AT4g00850/A_TM018A10_22
           [Arabidopsis thaliana] gi|21539894|gb|AAM52883.1|
           GRF1-interacting factor 3 [Arabidopsis thaliana]
           gi|332656545|gb|AEE81945.1| GRF1-interacting factor 3
           [Arabidopsis thaliana]
          Length = 223

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 50/71 (70%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = -3

Query: 894 MQQQAAPTMNTAPS-TPLNLVSTEQIQKYLDENKNLIMAILECQKTGKVAECAQYQAILQ 718
           MQQ         PS  P N ++TEQIQKYLDENK LIMAILE Q  GK+AECAQYQA+LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 717 KNLMYLAAIAD 685
           KNLMYLAAIAD
Sbjct: 61  KNLMYLAAIAD 71


>gb|AAB62864.1| contains region of similarity to SYT [Arabidopsis thaliana]
           gi|7267424|emb|CAB80894.1| AT4g00850 [Arabidopsis
           thaliana]
          Length = 230

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 50/71 (70%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = -3

Query: 894 MQQQAAPTMNTAPS-TPLNLVSTEQIQKYLDENKNLIMAILECQKTGKVAECAQYQAILQ 718
           MQQ         PS  P N ++TEQIQKYLDENK LIMAILE Q  GK+AECAQYQA+LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 717 KNLMYLAAIAD 685
           KNLMYLAAIAD
Sbjct: 61  KNLMYLAAIAD 71


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