BLASTX nr result

ID: Scutellaria23_contig00015894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015894
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15151.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...    70   2e-10
ref|XP_004155050.1| PREDICTED: LOW QUALITY PROTEIN: putative pre...    64   1e-08
ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor...    64   1e-08
ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...    63   2e-08

>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = -2

Query: 257 QDDIDDEVVTNEGNGRRVRSRAAHDKXXXXXXXXXXXXXXXXXXXXXXRIKERDAVGTRK 78
           +DD DDEV+      R+V+ R + D+                       I++RDA GTRK
Sbjct: 144 EDDADDEVIARAEESRQVKRRTSQDEDDDSELEEESLRDRREREQLEQNIRQRDAAGTRK 203

Query: 77  MTDQKLTKKEEEEAIRRSDALEND 6
           +T+QKL++KEEEEAIRRS+A+E D
Sbjct: 204 LTEQKLSRKEEEEAIRRSNAMEED 227


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = -2

Query: 257 QDDIDDEVVTNEGNGRRVRSRAAHDKXXXXXXXXXXXXXXXXXXXXXXRIKERDAVGTRK 78
           +DD DDEV+      R+V+ R + D+                       I++RDA GTRK
Sbjct: 144 EDDADDEVIARAEESRQVKRRTSQDEDDDSELEEESLRDRREREQLEQNIRQRDAAGTRK 203

Query: 77  MTDQKLTKKEEEEAIRRSDALEND 6
           +T+QKL++KEEEEAIRRS+A+E D
Sbjct: 204 LTEQKLSRKEEEEAIRRSNAMEED 227


>ref|XP_004155050.1| PREDICTED: LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor
           ATP-dependent RNA helicase DHX16-like, partial [Cucumis
           sativus]
          Length = 1049

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
 Frame = -2

Query: 257 QDDIDDE---VVTNEGNGRRVRSRAAHDKXXXXXXXXXXXXXXXXXXXXXXRIKERDAVG 87
           Q+D DDE    +  E    + R RA+  +                       I+ERDA G
Sbjct: 129 QEDEDDEKESALERENRQVKRRQRASSSEDESSESEEERLRDQREREQLERNIRERDAAG 188

Query: 86  TRKMTDQKLTKKEEEEAIRRSDALENDG 3
           T+K+T+QKL++KEEEEAIRRS+ALENDG
Sbjct: 189 TKKLTEQKLSRKEEEEAIRRSEALENDG 216


>ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Cucumis sativus]
          Length = 1055

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
 Frame = -2

Query: 257 QDDIDDE---VVTNEGNGRRVRSRAAHDKXXXXXXXXXXXXXXXXXXXXXXRIKERDAVG 87
           Q+D DDE    +  E    + R RA+  +                       I+ERDA G
Sbjct: 135 QEDEDDEKESALERENRQVKRRQRASSSEDESSESEEERLRDQREREQLERNIRERDAAG 194

Query: 86  TRKMTDQKLTKKEEEEAIRRSDALENDG 3
           T+K+T+QKL++KEEEEAIRRS+ALENDG
Sbjct: 195 TKKLTEQKLSRKEEEEAIRRSEALENDG 222


>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/84 (42%), Positives = 47/84 (55%)
 Frame = -2

Query: 257 QDDIDDEVVTNEGNGRRVRSRAAHDKXXXXXXXXXXXXXXXXXXXXXXRIKERDAVGTRK 78
           QDD DDE +  +   R+V+ R + D+                       ++ERDA GTRK
Sbjct: 136 QDDQDDEAIKEKE--RQVKRRTSPDEDSDSESEEERLKDQREKEELEQHMRERDAAGTRK 193

Query: 77  MTDQKLTKKEEEEAIRRSDALEND 6
           +T+QKLT+KEEEEAIRRS A E D
Sbjct: 194 LTEQKLTRKEEEEAIRRSKAAEQD 217


Top