BLASTX nr result

ID: Scutellaria23_contig00015807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015807
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|2...   243   1e-61
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu...   238   2e-60
ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...   221   4e-55
ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-...   220   8e-55
ref|XP_002888226.1| helicase domain-containing protein [Arabidop...   210   6e-52

>ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|222838999|gb|EEE77350.1|
            predicted protein [Populus trichocarpa]
          Length = 870

 Score =  243 bits (619), Expect = 1e-61
 Identities = 132/271 (48%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
 Frame = +3

Query: 9    DAVSRCDKEGDAAPTEFLGVDQKGVGTSSSHEYSIDTASISINQQNKDILENKSDDVELG 188
            +A++  D EGD+   E + VD+  + +SSS  + ++    S+  +  +I+  +S+DVE+G
Sbjct: 296  EAITSLDVEGDSTIVESI-VDENDLESSSSIGFPLNPVPSSVPLEG-EIVSEESEDVEIG 353

Query: 189  DFFVEDSSPDQPLPPVVLEIQXXXXXXXXXXXXXXXXXXGIWKKGDPKKIPKAVLHQLCQ 368
            DFF++D+S +  LPP +LE+Q                  GIWKKGDP+KIPKAVLHQLCQ
Sbjct: 354  DFFIDDASSNDALPPGILELQKREKMRELCSEKNLEKLEGIWKKGDPQKIPKAVLHQLCQ 413

Query: 369  KSGWEAPKYDKVPXXXXXXXXXXXVLRKASGRGKSRKAGGLTTIQLPSPDESL-NTEDAQ 545
            KSGWEAPK++KV            +LRKASGRGKSRKAGGL ++QLP  D++  + EDAQ
Sbjct: 414  KSGWEAPKFNKVLERELGFSYAVSILRKASGRGKSRKAGGLISLQLPDQDDTFESAEDAQ 473

Query: 546  NRVAVYALHCLFPDLPVHFALSEPYASLLLKWKEGELLTTVTDKPEDRRAGFVDSLLNAD 725
            NRVA +ALH LFPDLP+H A+  PY+SL+L+WK+GE    V D  EDRRAGFVD LL AD
Sbjct: 474  NRVAAFALHQLFPDLPIHLAIINPYSSLVLQWKQGETSKRVEDSVEDRRAGFVDLLLKAD 533

Query: 726  -KSEHAVETDLIDTSHQKMIQIPHIVEHTDS 815
              S  AV+     TS Q+ ++I  + E  DS
Sbjct: 534  GSSSSAVDA---TTSSQETLKITDVEETKDS 561


>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1509

 Score =  238 bits (608), Expect = 2e-60
 Identities = 124/229 (54%), Positives = 156/229 (68%), Gaps = 1/229 (0%)
 Frame = +3

Query: 48   PTEFLGVDQKGVGTSSSHEYSIDTASISINQQNKDILENKSDDVELGDFFVEDSSPDQPL 227
            P+E L  D   + + S  E+ ++ A  S+  Q K  LE+++ D+ELG FF+ED++ ++ L
Sbjct: 314  PSEELPADPNDMESPSYMEFPVELAPSSVPVQGKIDLEDETADMELGGFFMEDATSNEAL 373

Query: 228  PPVVLEIQXXXXXXXXXXXXXXXXXXGIWKKGDPKKIPKAVLHQLCQKSGWEAPKYDKVP 407
            PP VLE+Q                  GIWKKGDPKKIPKAVLHQLCQKSGWEAPK+ KV 
Sbjct: 374  PPEVLELQKKEKMKKLSSEKNLEKLDGIWKKGDPKKIPKAVLHQLCQKSGWEAPKFKKVH 433

Query: 408  XXXXXXXXXXXVLRKASGRGKSRKAGGLTTIQLPSPDESL-NTEDAQNRVAVYALHCLFP 584
                       +LRKASGRGKSRKAGGL T+QLP  DE+  + EDAQNR+A +ALH LFP
Sbjct: 434  ERRKGFSYSVSILRKASGRGKSRKAGGLITLQLPDQDETYESAEDAQNRIAAFALHQLFP 493

Query: 585  DLPVHFALSEPYASLLLKWKEGELLTTVTDKPEDRRAGFVDSLLNADKS 731
            DLPVH  +S+PY SL+L+WKEGE  + V +  +DRRAGFVD LLNAD+S
Sbjct: 494  DLPVHLIVSDPYDSLILQWKEGESSSKVENTVDDRRAGFVDWLLNADES 542


>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
            gi|297739540|emb|CBI29722.3| unnamed protein product
            [Vitis vinifera]
          Length = 1458

 Score =  221 bits (563), Expect = 4e-55
 Identities = 125/269 (46%), Positives = 166/269 (61%), Gaps = 3/269 (1%)
 Frame = +3

Query: 9    DAVSRCDKEGDAA--PTEFLGVDQKGVGTSSSHEYSIDTASISINQQNKDILENKSDDVE 182
            +A++ C+ EG +   P+E    D       SS E S+++ S S+  + +   +  S DVE
Sbjct: 299  EAITLCEVEGGSVMHPSEST-FDGSIKECFSSTELSMNSVSSSVPLEERIAAQEDSGDVE 357

Query: 183  LGDFFVEDSSPDQPLPPVVLEIQXXXXXXXXXXXXXXXXXXGIWKKGDPKKIPKAVLHQL 362
            L +FF ED+   + LP  VL++Q                  GIWKKGDP+KIPKAVLHQL
Sbjct: 358  LSNFF-EDAPSSEVLPHEVLKLQNKEKMKELSSGKNLEKLEGIWKKGDPQKIPKAVLHQL 416

Query: 363  CQKSGWEAPKYDKVPXXXXXXXXXXXVLRKASGRGKSRKAGGLTTIQLPSPDESL-NTED 539
            CQ+SGWEAPK +KV            VLRK++GRGKSRKAGGLTT++LP   E+  + ED
Sbjct: 417  CQRSGWEAPKLNKVLGKENGFCYAVSVLRKSTGRGKSRKAGGLTTLELPDQLEAFESAED 476

Query: 540  AQNRVAVYALHCLFPDLPVHFALSEPYASLLLKWKEGELLTTVTDKPEDRRAGFVDSLLN 719
            AQN VA YAL+ LFPDLP+H A++EPYAS +++WKEGE    + D  EDRRAGFV+S+L+
Sbjct: 477  AQNAVAAYALYQLFPDLPIHLAITEPYASFVIQWKEGESSIRIEDSEEDRRAGFVNSILD 536

Query: 720  ADKSEHAVETDLIDTSHQKMIQIPHIVEH 806
            A  S      D+ D S  K  Q+P I E+
Sbjct: 537  AGDSGSTAFVDVTDNSLPKKFQMPQIEEN 565


>ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Glycine max]
          Length = 1528

 Score =  220 bits (560), Expect = 8e-55
 Identities = 118/248 (47%), Positives = 160/248 (64%), Gaps = 2/248 (0%)
 Frame = +3

Query: 24   CDKEGDAA-PTEFLGVDQKGVGTSSSHEYSIDTASISINQQNKDILENKSDDVELGDFFV 200
            CD EG A+  TE   V +  V + S  E+ + + S+ ++ + KD  + +  D+ELG  F+
Sbjct: 287  CDTEGLASGKTE---VAESDVESHSMVEHLVKSGSLVVHVE-KDSAQGEVGDIELGGLFL 342

Query: 201  EDSSPDQPLPPVVLEIQXXXXXXXXXXXXXXXXXXGIWKKGDPKKIPKAVLHQLCQKSGW 380
            ED+SP + LPP +L++Q                  GIWKKGDP+KIPKAVLHQLCQKSGW
Sbjct: 343  EDASPSEILPPDILKVQKQEKIRRLSEKNLDKLD-GIWKKGDPQKIPKAVLHQLCQKSGW 401

Query: 381  EAPKYDKVPXXXXXXXXXXXVLRKASGRGKSRKAGGLTTIQLPSPDESL-NTEDAQNRVA 557
            EAPK+DK+            +LRKASGRGK+RKAGGL T+QLP  +E++ + EDAQN+VA
Sbjct: 402  EAPKFDKILGRGKIFSYTVSILRKASGRGKNRKAGGLVTLQLPDQNETVESAEDAQNKVA 461

Query: 558  VYALHCLFPDLPVHFALSEPYASLLLKWKEGELLTTVTDKPEDRRAGFVDSLLNADKSEH 737
             YAL+ LFPD+PVH  ++EPY  L++KW EGE  T + D  ++ R+GFVDSLLN + S  
Sbjct: 462  AYALYKLFPDIPVHLPITEPYTLLIMKWMEGESSTNLEDSEKNHRSGFVDSLLNDNSSAA 521

Query: 738  AVETDLID 761
                D+ D
Sbjct: 522  TASVDVTD 529


>ref|XP_002888226.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297334067|gb|EFH64485.1| helicase domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1458

 Score =  210 bits (535), Expect = 6e-52
 Identities = 113/239 (47%), Positives = 147/239 (61%), Gaps = 3/239 (1%)
 Frame = +3

Query: 60   LGVDQKGVGTSSSHEYSIDTASISINQQNKDIL--ENKSDDVELGDFFVEDSSPDQPLPP 233
            L +D    G+  S E  I T ++  +   +D++  +  S+DVELGD F E+  P +  P 
Sbjct: 318  LTLDANPAGSCESEE--IQTKALPSSSSGQDLVASDEDSEDVELGDTFFEEIPPSEISPH 375

Query: 234  VVLEIQXXXXXXXXXXXXXXXXXXGIWKKGDPKKIPKAVLHQLCQKSGWEAPKYDKVPXX 413
             +LE+Q                  GIWKKGD +KIPKA LHQLCQ+SGWEAPK++KV   
Sbjct: 376  ELLELQKEEKMRELRSEKNLGKLDGIWKKGDAQKIPKAFLHQLCQRSGWEAPKFNKVTGE 435

Query: 414  XXXXXXXXXVLRKASGRGKSRKAGGLTTIQLPSPDESLNT-EDAQNRVAVYALHCLFPDL 590
                     +LRKASGRGK+R+AGGL T+QLP  D++  + EDAQN+VA +ALH LF DL
Sbjct: 436  ERNFSYAVSILRKASGRGKNRQAGGLVTLQLPLKDDNFESIEDAQNKVAAFALHKLFSDL 495

Query: 591  PVHFALSEPYASLLLKWKEGELLTTVTDKPEDRRAGFVDSLLNADKSEHAVETDLIDTS 767
            PVHFA++EPYASL+L WK+ ELL T+    EDRRA FVD LL  D       +  ID +
Sbjct: 496  PVHFAITEPYASLVLNWKQEELLCTIQSTEEDRRANFVDKLLEEDNFSLTASSSSIDNA 554


Top