BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015639
         (1457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...   300   6e-79
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...   289   1e-75
ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron sp...   251   3e-64
ref|NP_197122.2| ortholog of maize chloroplast splicing factor C...   230   6e-58
ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron sp...   230   8e-58

>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score =  300 bits (768), Expect = 6e-79
 Identities = 177/423 (41%), Positives = 236/423 (55%), Gaps = 29/423 (6%)
 Frame = +3

Query: 276  FITFSSSLTNGS---------NSTKKEGRSTEYESKNSYPQ---SSEPVHHSRSGIKAPT 419
            F + S+SL+N S         +S K    S    +  ++P    SS+PV  + + IK PT
Sbjct: 18   FPSNSNSLSNSSIRILNPQRIHSFKPPPISATTTATTNHPDHSISSQPVSGTDAAIKMPT 77

Query: 420  APWMNEPLLVKPNEMESLKRRSKRGFNSGKNGESPDVDLTGKVGGGRGRLAMKKVLKGIE 599
            APWM  PLL++PNE+  L +   +        E PD  LT KV GGRG  AMKK+++ I 
Sbjct: 78   APWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVSGGRGAKAMKKIMQSIV 137

Query: 600  SLQEMQNFEEIEKNPENHKFKFAPGDLWGNGDCESDVEVEKNGEVAEESLGSDEFDIPLS 779
             LQE    +E ++N E  +F                        V+ E +G DE      
Sbjct: 138  KLQETHTSDETQENTEEFEFG-----------------------VSLEGIGGDE------ 168

Query: 780  XXXXXXXXXXXPWERDEKSVIRRVMKETVATAAELSLDGVLLERLRNEATLIKKWIKVMK 959
                       PW + EK V RR  KE V TAAEL+LD +LLERLR EA  ++KW+KV K
Sbjct: 169  ---NSRIGGKMPWLKTEKVVFRRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKK 225

Query: 960  AGVTQAVVDQVHFLWRYNELALLKFDIPLCRNMDRAREIVEIKTGGLVVWRNKDFLAVYR 1139
            AGVT++VVDQ+H +W+ +ELA++KFD+PLCRNMDRAREI+EIKT GLV+W  KD L VYR
Sbjct: 226  AGVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYR 285

Query: 1140 GCNYGSGSKYFRDI---YVNSASDKGNSSSAMNYQNTRIFTRVSSSGGSPDKMVHGKDGK 1310
            G NY S SK+F+ +    V  A    +  +  N+++    + +     +  + +  KDG+
Sbjct: 286  GSNYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGE 345

Query: 1311 LGSLQM--------------PSLYEREADRLLNGLGPRFDDWWMQKPLPVDGDLLPELVP 1448
              S                  SLYEREADRLL+GLGPRF DWW  KPLPVD DLLPE++P
Sbjct: 346  EDSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLP 405

Query: 1449 GFK 1457
            GF+
Sbjct: 406  GFR 408


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
            gi|223544130|gb|EEF45655.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 742

 Score =  289 bits (739), Expect = 1e-75
 Identities = 173/401 (43%), Positives = 230/401 (57%), Gaps = 1/401 (0%)
 Frame = +3

Query: 255  PTFSKYTFITFSSSLTNGSNSTKKEGRSTEYESKNSYPQSSEPVHHSRSGIKAPTAPWMN 434
            P  S     T  SSL N  N      ++TE+         S P   S + IK PTAPWM 
Sbjct: 14   PIASSLNPATNKSSLNNAQNPKFATNKNTEFTLL------SVPNSQSNAPIKVPTAPWMK 67

Query: 435  EPLLVKPNEMESLKRRSKRGFNSGKNGESPDVDLTGKVGGGRGRLAMKKVLKGIESLQEM 614
             PLL++P+E+ +L +   +  ++  N E  D  LTGK  G RG+ AM+K++K IE LQE 
Sbjct: 68   GPLLLQPHELINLSKPRNKNSSNNANIEKSDKVLTGKESGVRGKKAMEKIVKSIEQLQEN 127

Query: 615  QNFEEIEKNPENHKFKFAPGDLWGNGDCESDVEVEKNGEVAEESLGSDEFDIPLSXXXXX 794
            Q  E+ + + + ++      + +  G        EK G + E      +F +        
Sbjct: 128  QALEKTQCDSQAYEKTQLDSEAFEIG--------EKLGLIREHG----DFGV-------- 167

Query: 795  XXXXXXPWERDEKSVIRRVMKETVATAAELSLDGVLLERLRNEATLIKKWIKVMKAGVTQ 974
                  PWER+EK V  R+ KE   T AEL L+  LLE LR EA+ ++KW+KVMKAGVTQ
Sbjct: 168  -NKKLKPWEREEKFVYWRIKKEKAVTKAELILEKELLEILRTEASKMRKWVKVMKAGVTQ 226

Query: 975  AVVDQVHFLWRYNELALLKFDIPLCRNMDRAREIVEIKTGGLVVWRNKDFLAVYRGCNYG 1154
            +VVDQ+ + WR NELA++KFD+PLCRNMDRAREIVE+KTGGLVVW  KD L +YRGCNY 
Sbjct: 227  SVVDQIRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVWTRKDSLVIYRGCNY- 285

Query: 1155 SGSKYFRDIYVNSASDK-GNSSSAMNYQNTRIFTRVSSSGGSPDKMVHGKDGKLGSLQMP 1331
                  +  +V++  +K G+      Y  T IF  +     +P   ++G           
Sbjct: 286  ---HLTKSSHVSTMDEKIGSKDGEEEYIPTSIF--IGDDANTP--TING----------- 327

Query: 1332 SLYEREADRLLNGLGPRFDDWWMQKPLPVDGDLLPELVPGF 1454
            SL+ERE DRLL+GLGPRF DWWM+KPLPVD DLLPE+V GF
Sbjct: 328  SLFERETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVAGF 368


>ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 712

 Score =  251 bits (642), Expect = 3e-64
 Identities = 168/395 (42%), Positives = 210/395 (53%), Gaps = 1/395 (0%)
 Frame = +3

Query: 276  FITFSSSLTNGSNSTKKEGRSTEYESKNSYP-QSSEPVHHSRSGIKAPTAPWMNEPLLVK 452
            F++F  SL   S S      S    S N +  Q + P   S+  IK+PT PWM  PLL++
Sbjct: 3    FLSFHPSLFPNSYSRFHISSSLPPNSNNGHNHQHTSP---SQVPIKSPTPPWMKVPLLLQ 59

Query: 453  PNEMESLKRRSKRGFNSGKNGESPDVDLTGKVGGGRGRLAMKKVLKGIESLQEMQNFEEI 632
            P+E+  L     + F   K+ E  D  L GK    RG+ AMKK++  +E L + QN  E 
Sbjct: 60   PHELVDLSNPKSKKFKPEKH-ELSDKALMGKEV--RGKRAMKKIVDRVEKLHKTQNSNET 116

Query: 633  EKNPENHKFKFAPGDLWGNGDCESDVEVEKNGEVAEESLGSDEFDIPLSXXXXXXXXXXX 812
              +  N                     VE  G   E    ++E                 
Sbjct: 117  RVDSLN---------------------VENFGGYLEILKENEEV----------RSKGRM 145

Query: 813  PWERDEKSVIRRVMKETVATAAELSLDGVLLERLRNEATLIKKWIKVMKAGVTQAVVDQV 992
            PWE+DEK    +V +E   TAAEL+LD  LL RLRNEA  ++ WIKV KAGVTQ VVDQ+
Sbjct: 146  PWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDVVDQI 205

Query: 993  HFLWRYNELALLKFDIPLCRNMDRAREIVEIKTGGLVVWRNKDFLAVYRGCNYGSGSKYF 1172
               WR NELA++KFDIPLCRNMDRAREIVE KTGGLVV   KDFL VYRGCN+ S     
Sbjct: 206  KRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHHSS---- 261

Query: 1173 RDIYVNSASDKGNSSSAMNYQNTRIFTRVSSSGGSPDKMVHGKDGKLGSLQMPSLYEREA 1352
             ++   +A  K + S+ +   N               ++V+G           SLYERE 
Sbjct: 262  -EMLNWNADHKDSISTGIQDVNC--------------QLVNG-----------SLYERET 295

Query: 1353 DRLLNGLGPRFDDWWMQKPLPVDGDLLPELVPGFK 1457
            +RLL+GLGPRF DWWM KPLPVD DLLPE VPGF+
Sbjct: 296  ERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQ 330


>ref|NP_197122.2| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
            thaliana] gi|374095377|sp|Q9LF10.2|CRS1_ARATH RecName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
            splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
            SPLICING 1; Flags: Precursor gi|332004875|gb|AED92258.1|
            ortholog of maize chloroplast splicing factor CRS1
            [Arabidopsis thaliana]
          Length = 720

 Score =  230 bits (587), Expect = 6e-58
 Identities = 158/424 (37%), Positives = 224/424 (52%), Gaps = 4/424 (0%)
 Frame = +3

Query: 195  LCHFSNAITCFPCNPTKIQAPTFSKYTFITFSSSLTNGS---NSTKKEGRSTEYESKNSY 365
            LC+FS+       NP K+Q  TF++     F S+    S   NS+ +  +S++++     
Sbjct: 24   LCNFSD-------NP-KLQ--TFTQMLNSLFLSARAFPSLITNSSSRRAKSSQFD----- 68

Query: 366  PQSSEPVHHSRSGIKAPTAPWMNEPLLVKPNEMESLKRRSKRGFNSGKNGESPDVDLTGK 545
             Q  E    S + IK PTAPWM  PLL++P+E+   K+R+K      K  E     L  +
Sbjct: 69   -QFRENRGVSDAAIKVPTAPWMKGPLLLRPDEILDTKKRNK----PRKVEEKTFKALNRR 123

Query: 546  VGGGRGRLAMKKVLKGIESLQEMQNFEEIEKNPENHKFKFAPGDLWGNGDCESDVEVEKN 725
              G RG+ AMKK+++ +E L E  + EE + +  +                    E E  
Sbjct: 124  ESGVRGKKAMKKIVRNVEKLDEDSDSEETQMDDLS--------------------EFEYL 163

Query: 726  GEVAEESLGSDEFDIPLSXXXXXXXXXXXPWERDEKS-VIRRVMKETVATAAELSLDGVL 902
            G + E+    D F   +            PWER+E+  ++RR+ KE+V T AEL LD  L
Sbjct: 164  GRIEEKVESKDRFGGKM------------PWEREEERFILRRMKKESVPTTAELILDEGL 211

Query: 903  LERLRNEATLIKKWIKVMKAGVTQAVVDQVHFLWRYNELALLKFDIPLCRNMDRAREIVE 1082
            L RLR EA+ ++KW+ V KAGVT+ VV+++  +W+ NELA+++FD+PLCRNM+RA+EI+E
Sbjct: 212  LNRLRREASKMRKWVNVRKAGVTELVVNKIKSMWKLNELAMVRFDVPLCRNMERAQEIIE 271

Query: 1083 IKTGGLVVWRNKDFLAVYRGCNYGSGSKYFRDIYVNSASDKGNSSSAMNYQNTRIFTRVS 1262
            +KTGGLVV   K+FL VYRG     G  Y         S +G                +S
Sbjct: 272  MKTGGLVVLSKKEFLVVYRG-----GPSY---------SSEGQD-------------EIS 304

Query: 1263 SSGGSPDKMVHGKDGKLGSLQMPSLYEREADRLLNGLGPRFDDWWMQKPLPVDGDLLPEL 1442
            S                      SLYEREADRLL+GLGPR+ DWWM++P PVD DLLPE+
Sbjct: 305  S----------------------SLYEREADRLLDGLGPRYMDWWMRRPFPVDADLLPEV 342

Query: 1443 VPGF 1454
            V G+
Sbjct: 343  VNGY 346


>ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 760

 Score =  230 bits (586), Expect = 8e-58
 Identities = 150/392 (38%), Positives = 198/392 (50%), Gaps = 24/392 (6%)
 Frame = +3

Query: 351  SKNSYPQSS----EPVHHSRSGIKAPTAPWMNEPLLVKPNEMESL---KRRSKRGFNSGK 509
            S  S P  S    EP   S + +   TAPWM  PL ++P + E         KR   S  
Sbjct: 36   SATSTPSQSSVLPEPPSISNAAVNLRTAPWMKAPLHLQPQQQEEEGVDPANPKRRNGSDG 95

Query: 510  NGESPDVDLTGKVGGGR-GRLAMKKVLKGIESLQEMQNFEEIEKNPENHKFKFAPGDLWG 686
            +G        G  G  + G+ AM+++ K I  L+   +  E     E  +F        G
Sbjct: 96   SGRDKCSRALGDSGIDKTGKYAMRRIAKSIGKLRRNGDLGETRMKLEEVEF--------G 147

Query: 687  NGDCESDVEVEKNGEVAEESLGSDEFDIPLSXXXXXXXXXXXPWERDEKSVIRRVMKETV 866
              D E     E++G                            PWE+D+  ++ R MK+  
Sbjct: 148  GFDLEG---FEESGT-----------------------RRRMPWEKDDDGIVLRRMKKKT 181

Query: 867  ATAAELSLDGVLLERLRNEATLIKKWIKVMKAGVTQAVVDQVHFLWRYNELALLKFDIPL 1046
             T+AEL+LD VLLERL+ EA+ ++KW+KV K GVTQ VV+Q+ F+W  NELA+LKFD+PL
Sbjct: 182  VTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNQIQFMWERNELAMLKFDVPL 241

Query: 1047 CRNMDRAREIVEIKTGGLVVWRNKDFLAVYRGCNYGSGSKYFRDIYVNSASDKGNSSSAM 1226
             RNMDRAREIVE+KTGG+VVW  K+ L VYRGCNY    K+        ++ K    S  
Sbjct: 242  SRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLNLKH--------STKKQVHISPQ 293

Query: 1227 NYQNTRIFTRVSSSG---GSPDKMVHGKDGKLGSLQ-------------MPSLYEREADR 1358
            N       T  S SG      ++ ++  DG+                    SLYERE DR
Sbjct: 294  NPVKVETDTHFSLSGHYESGLNRSINDNDGEWEEASSFFLIRHENLQPLSGSLYERETDR 353

Query: 1359 LLNGLGPRFDDWWMQKPLPVDGDLLPELVPGF 1454
            LL+ LGPRF DWWM KPLPVD D+LPE+VPG+
Sbjct: 354  LLDDLGPRFIDWWMHKPLPVDADMLPEVVPGY 385