BLASTX nr result

ID: Scutellaria23_contig00015632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015632
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604966.1| E3 ubiquitin-protein ligase PRT1 [Medicago t...    69   3e-10
ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...    64   2e-08
ref|XP_004139635.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...    63   2e-08
gb|AAM64697.1| PRT1 [Arabidopsis thaliana]                             62   4e-08

>ref|XP_003604966.1| E3 ubiquitin-protein ligase PRT1 [Medicago truncatula]
           gi|355506021|gb|AES87163.1| E3 ubiquitin-protein ligase
           PRT1 [Medicago truncatula]
          Length = 505

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/73 (43%), Positives = 42/73 (57%)
 Frame = -2

Query: 220 CFVCLDIMYKPVALGGMGXXXXXXXXXFIDASNFVLAFTHFPCFAACGHISCFWCVFKAM 41
           C VCLD++YKP+ L              +   +  L F+    F ACGHISCFWCV K+M
Sbjct: 22  CCVCLDLLYKPIVLCKTQHRVLKIVQIALVICDEFLLFSLL--FVACGHISCFWCVHKSM 79

Query: 40  DTFQESHCPVCRN 2
           +  +ESHCP CR+
Sbjct: 80  NASRESHCPTCRH 92


>ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|222841261|gb|EEE78808.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/74 (40%), Positives = 38/74 (51%)
 Frame = -2

Query: 223 QCFVCLDIMYKPVALGGMGXXXXXXXXXFIDASNFVLAFTHFPCFAACGHISCFWCVFKA 44
           QC VCLD++YKPV LG                               CGH+SCFWCVF +
Sbjct: 52  QCSVCLDLLYKPVVLG-------------------------------CGHLSCFWCVFYS 80

Query: 43  MDTFQESHCPVCRN 2
           M+  +ESHCP+CR+
Sbjct: 81  MNGLRESHCPICRH 94


>ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera]
          Length = 470

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/73 (41%), Positives = 35/73 (47%)
 Frame = -2

Query: 220 CFVCLDIMYKPVALGGMGXXXXXXXXXFIDASNFVLAFTHFPCFAACGHISCFWCVFKAM 41
           C VCLD++YKP+ L                               ACGHISCFWCV  +M
Sbjct: 24  CCVCLDLLYKPIVL-------------------------------ACGHISCFWCVHYSM 52

Query: 40  DTFQESHCPVCRN 2
           D   ESHCP+CRN
Sbjct: 53  DGAHESHCPICRN 65


>ref|XP_004139635.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Cucumis sativus]
          Length = 359

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/72 (40%), Positives = 35/72 (48%)
 Frame = -2

Query: 220 CFVCLDIMYKPVALGGMGXXXXXXXXXFIDASNFVLAFTHFPCFAACGHISCFWCVFKAM 41
           C VCLD++YKP+ L                                CGHISCFWCV K M
Sbjct: 17  CCVCLDLLYKPIVL-------------------------------PCGHISCFWCVHKCM 45

Query: 40  DTFQESHCPVCR 5
           + F+ESHCP+CR
Sbjct: 46  NGFRESHCPICR 57


>gb|AAM64697.1| PRT1 [Arabidopsis thaliana]
          Length = 401

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/73 (36%), Positives = 38/73 (52%)
 Frame = -2

Query: 220 CFVCLDIMYKPVALGGMGXXXXXXXXXFIDASNFVLAFTHFPCFAACGHISCFWCVFKAM 41
           C VCL+++YKP+ L                               +CGH+SCFWCV K+M
Sbjct: 17  CCVCLELLYKPIVL-------------------------------SCGHLSCFWCVHKSM 45

Query: 40  DTFQESHCPVCRN 2
           + F+ESHCP+CR+
Sbjct: 46  NGFRESHCPICRD 58


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