BLASTX nr result

ID: Scutellaria23_contig00015550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015550
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    72   6e-11
emb|CBI40505.3| unnamed protein product [Vitis vinifera]               72   6e-11
emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]    72   6e-11
ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putativ...    60   2e-07
ref|XP_004139737.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    59   5e-07

>ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Vitis
           vinifera]
          Length = 751

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 55/133 (41%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
 Frame = +2

Query: 116 PILSEVFPLKLKCHFLRPANLQRRLLLTRGQACSPVPFGARKLATRAGRDRMGS--GFEQ 289
           PI   VFP KLK   L P                   FG R+L+TR+ R R  S  GF  
Sbjct: 37  PIFGRVFPFKLKYLGLAPPPSHH--------------FGPRRLSTRSSRPRPSSTSGFRG 82

Query: 290 DVRVGSKSLIEDEADLSDWVSGLNSSSSFKKTRVFSDSDHEDVVKSGEFRREGAGKRRKD 469
           +V+V SKSL+EDEA+LSDWVSGL   S   +TR F+D D E    +G   R+   KR ++
Sbjct: 83  EVKV-SKSLMEDEAELSDWVSGLKDDSF--RTR-FNDDDSEGERGTGRSGRDSM-KRTRE 137

Query: 470 NDFDKDSDFRGRR 508
            + D+  DF  RR
Sbjct: 138 IESDEFGDFNRRR 150


>emb|CBI40505.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 55/133 (41%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
 Frame = +2

Query: 116 PILSEVFPLKLKCHFLRPANLQRRLLLTRGQACSPVPFGARKLATRAGRDRMGS--GFEQ 289
           PI   VFP KLK   L P                   FG R+L+TR+ R R  S  GF  
Sbjct: 37  PIFGRVFPFKLKYLGLAPPPSHH--------------FGPRRLSTRSSRPRPSSTSGFRG 82

Query: 290 DVRVGSKSLIEDEADLSDWVSGLNSSSSFKKTRVFSDSDHEDVVKSGEFRREGAGKRRKD 469
           +V+V SKSL+EDEA+LSDWVSGL   S   +TR F+D D E    +G   R+   KR ++
Sbjct: 83  EVKV-SKSLMEDEAELSDWVSGLKDDSF--RTR-FNDDDSEGERGTGRSGRDSM-KRTRE 137

Query: 470 NDFDKDSDFRGRR 508
            + D+  DF  RR
Sbjct: 138 IESDEFGDFNRRR 150


>emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]
          Length = 863

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 55/133 (41%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
 Frame = +2

Query: 116 PILSEVFPLKLKCHFLRPANLQRRLLLTRGQACSPVPFGARKLATRAGRDRMGS--GFEQ 289
           PI   VFP KLK   L P                   FG R+L+TR+ R R  S  GF  
Sbjct: 37  PIFGRVFPFKLKYLGLAPPPSHH--------------FGPRRLSTRSSRPRPSSTSGFRG 82

Query: 290 DVRVGSKSLIEDEADLSDWVSGLNSSSSFKKTRVFSDSDHEDVVKSGEFRREGAGKRRKD 469
           +V+V SKSL+EDEA+LSDWVSGL   S   +TR F+D D E    +G   R+   KR ++
Sbjct: 83  EVKV-SKSLMEDEAELSDWVSGLKDDSF--RTR-FNDDDSEGERGTGRSGRDSM-KRTRE 137

Query: 470 NDFDKDSDFRGRR 508
            + D+  DF  RR
Sbjct: 138 IESDEFGDFNRRR 150


>ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537452|gb|EEF39080.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 751

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
 Frame = +2

Query: 116 PILSEVFPLKLKCHFLRPA-NLQRRLLLTRGQACSPVPFGARKLATRAGRDRMGSGFEQD 292
           PI S++FP +LK   L P  N Q                  R+ +TR+ R R  +    +
Sbjct: 37  PIFSQIFPFRLKYLGLSPYFNSQ---------------LSVRRFSTRSFRPRTTARSSSE 81

Query: 293 VRVGSKSLIEDEADLSDWVSGLNSSSSFKKTRVFSDSDHEDVVKSGEFRREG-----AGK 457
            R  SKSLIEDEA+LSDWVS L +SS   K     +SD  D+ ++   R  G     + K
Sbjct: 82  FRQ-SKSLIEDEAELSDWVSELKTSSLRGKLTSEDESD-SDMTRNKSKRERGREGFSSSK 139

Query: 458 RRKDNDFDKDSDFRGRR 508
           RR++ + D+ S+   RR
Sbjct: 140 RRRERETDEFSELNNRR 156


>ref|XP_004139737.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           26-like [Cucumis sativus]
          Length = 841

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 55/152 (36%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
 Frame = +2

Query: 68  PFMMTS-KLSPFQPILR-----PILSEVFPLKLKCHFLRPANLQRRLLLTRGQACSPVPF 229
           PF + S  L   QP +R     PI S VFP KLK  +   A   R          S   F
Sbjct: 15  PFPLPSFPLMKLQPSIRQSRPFPIFSRVFPFKLK--YASMAFSSR----------SSQAF 62

Query: 230 GARKLATRAGRDRMGSGFEQDVRVGSKSLIEDEADLSDWVSGLNSSSSFKKTRVFSDSDH 409
              + ++  GR+    GF      GSKSL+EDEA+LSDWVS L +SS   + R+ SD D 
Sbjct: 63  QGVRRSSAVGRNSERGGFG-----GSKSLVEDEAELSDWVSDLKTSSF--RGRITSDEDS 115

Query: 410 EDVVKSGEFRREGAGKRRKDNDFDKDSDFRGR 505
           +         R G+  R +D D +  S  RGR
Sbjct: 116 DG-------DRRGSRGRDRDRDRESPSLKRGR 140


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