BLASTX nr result
ID: Scutellaria23_contig00015495
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00015495
(1506 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 343 9e-92
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-... 343 9e-92
ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165... 287 6e-75
ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD,... 279 1e-72
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,... 279 1e-72
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 343 bits (879), Expect = 9e-92
Identities = 178/320 (55%), Positives = 232/320 (72%)
Frame = -3
Query: 1024 KSRFMTPKEEATFSWYLKERARIEGVRREVMAEMGGNEVSTKQWAKAAGISLHKLDRILW 845
+S +TP+EEA F LKE A +E RR + AE +E ++ QWA+A GI LD++L
Sbjct: 19 RSAVLTPREEAEFCLCLKEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLC 77
Query: 844 NGRESEKKITSCYHGLVVSIASSYQGKGLSIQDLTQEGSIGLLHGAIKFNPERGYKLSTY 665
NGRES ++I Y LVVSIA+ YQGKGLS+QDL QEGSIGLL GA +F+P+RGYKLSTY
Sbjct: 78 NGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTY 137
Query: 664 AYWWIRQSITRAIANKSRIIRLPXXXXXXXXXXXXXXXXXXXGTISELMPRICEANNALS 485
YWWIRQ+I RAIANKSRIIRLP G+I E++ +I EA LS
Sbjct: 138 VYWWIRQAIVRAIANKSRIIRLP-------------------GSICEMVAKIAEARTVLS 178
Query: 484 RKLRRFPTYEEISESINANASSVRLAIERNRPVISLDQAMTSRGYISLQHIIPGPDEITP 305
R+LRR PTY+EI+E I+ N S+VRL ER+R IS+DQA+TS+G ++LQ IIPGPDE TP
Sbjct: 179 RRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTSQGCMTLQEIIPGPDETTP 238
Query: 304 EALVKKELLKPEIGKLFETLCDREKQILRLHYGLNGESGWSFEEIGRMFKLSRERVRQIN 125
+ +VK++L+K E+ + TLC+RE ILRL++G+NGE+ SFEEIGR+ KLSRERVRQIN
Sbjct: 239 QKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSFEEIGRLMKLSRERVRQIN 298
Query: 124 FAALSKIRETNQINDLNYFL 65
ALSK+R+T+ ++ L ++
Sbjct: 299 SIALSKLRQTSVVDYLKLYM 318
>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 426
Score = 343 bits (879), Expect = 9e-92
Identities = 178/320 (55%), Positives = 232/320 (72%)
Frame = -3
Query: 1024 KSRFMTPKEEATFSWYLKERARIEGVRREVMAEMGGNEVSTKQWAKAAGISLHKLDRILW 845
+S +TP+EEA F LKE A +E RR + AE +E ++ QWA+A GI LD++L
Sbjct: 126 RSAVLTPREEAEFCLCLKEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLC 184
Query: 844 NGRESEKKITSCYHGLVVSIASSYQGKGLSIQDLTQEGSIGLLHGAIKFNPERGYKLSTY 665
NGRES ++I Y LVVSIA+ YQGKGLS+QDL QEGSIGLL GA +F+P+RGYKLSTY
Sbjct: 185 NGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTY 244
Query: 664 AYWWIRQSITRAIANKSRIIRLPXXXXXXXXXXXXXXXXXXXGTISELMPRICEANNALS 485
YWWIRQ+I RAIANKSRIIRLP G+I E++ +I EA LS
Sbjct: 245 VYWWIRQAIVRAIANKSRIIRLP-------------------GSICEMVAKIAEARTVLS 285
Query: 484 RKLRRFPTYEEISESINANASSVRLAIERNRPVISLDQAMTSRGYISLQHIIPGPDEITP 305
R+LRR PTY+EI+E I+ N S+VRL ER+R IS+DQA+TS+G ++LQ IIPGPDE TP
Sbjct: 286 RRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTSQGCMTLQEIIPGPDETTP 345
Query: 304 EALVKKELLKPEIGKLFETLCDREKQILRLHYGLNGESGWSFEEIGRMFKLSRERVRQIN 125
+ +VK++L+K E+ + TLC+RE ILRL++G+NGE+ SFEEIGR+ KLSRERVRQIN
Sbjct: 346 QKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSFEEIGRLMKLSRERVRQIN 405
Query: 124 FAALSKIRETNQINDLNYFL 65
ALSK+R+T+ ++ L ++
Sbjct: 406 SIALSKLRQTSVVDYLKLYM 425
>ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana]
gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA
polymerase sigma factor sigD, chloroplastic; Short=Sigma
factor D; Short=Sigma-D; AltName: Full=RNA polymerase
sigma factor sig4; Short=Atsig4; Short=Sigma factor 4;
Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like
factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1|
RNA polymerase sigma subunit SigD [Arabidopsis thaliana]
gi|9758039|dbj|BAB08700.1| sigma-like factor [Arabidopsis
thaliana] gi|332004550|gb|AED91933.1| sigma factor 4
[Arabidopsis thaliana]
Length = 419
Score = 287 bits (734), Expect = 6e-75
Identities = 154/319 (48%), Positives = 211/319 (66%)
Frame = -3
Query: 1024 KSRFMTPKEEATFSWYLKERARIEGVRREVMAEMGGNEVSTKQWAKAAGISLHKLDRILW 845
+S F++ EE YLKE A++E + V NE+ + A G + IL
Sbjct: 119 RSGFLSRLEEVQLCLYLKEGAKLENLGTSVEE----NEMVSVLLASGRGKKKRSANEILC 174
Query: 844 NGRESEKKITSCYHGLVVSIASSYQGKGLSIQDLTQEGSIGLLHGAIKFNPERGYKLSTY 665
+E+ +KIT CY LVVSIA+ YQGKGL++QDL QEGSIGLL GA +F+P+RGYKLSTY
Sbjct: 175 RRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTY 234
Query: 664 AYWWIRQSITRAIANKSRIIRLPXXXXXXXXXXXXXXXXXXXGTISELMPRICEANNALS 485
YWWI+Q+I RAIA+KSR+++LP G++ EL ++ EA+N L+
Sbjct: 235 VYWWIKQAILRAIAHKSRLVKLP-------------------GSMWELTAKVAEASNVLT 275
Query: 484 RKLRRFPTYEEISESINANASSVRLAIERNRPVISLDQAMTSRGYISLQHIIPGPDEITP 305
RKLRR P+ EEI+E +N N S+VRLA+ER+R +SLD+ + G ++LQ I+ GPDE P
Sbjct: 276 RKLRRQPSCEEIAEHLNLNVSAVRLAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRP 335
Query: 304 EALVKKELLKPEIGKLFETLCDREKQILRLHYGLNGESGWSFEEIGRMFKLSRERVRQIN 125
E +VK+E +K EI +L +L RE ++L L++GLNGE+ SFEEIG+ KLSRERVRQIN
Sbjct: 336 EEMVKREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQIN 395
Query: 124 FAALSKIRETNQINDLNYF 68
AL K+R + +NDL +
Sbjct: 396 GIALKKLRNVHNVNDLKIY 414
>ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 341
Score = 279 bits (714), Expect = 1e-72
Identities = 149/322 (46%), Positives = 210/322 (65%)
Frame = -3
Query: 1030 PRKSRFMTPKEEATFSWYLKERARIEGVRREVMAEMGGNEVSTKQWAKAAGISLHKLDRI 851
P + +++PKEEA LKE +E V+ +M E +E + KQ A A G +DRI
Sbjct: 39 PLRPGYLSPKEEAELCLCLKEAVLLENVKTRIM-ETQEHEPTNKQLAIAMGTKSGCIDRI 97
Query: 850 LWNGRESEKKITSCYHGLVVSIASSYQGKGLSIQDLTQEGSIGLLHGAIKFNPERGYKLS 671
L RES ++ CY LV+SIA+ YQGKGLS+QDLTQEG+IGLL GA +F P RG+KLS
Sbjct: 98 LCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLS 157
Query: 670 TYAYWWIRQSITRAIANKSRIIRLPXXXXXXXXXXXXXXXXXXXGTISELMPRICEANNA 491
TYAYWWIRQ+I RA+ KSR++RLP G + +++ RI E NN
Sbjct: 158 TYAYWWIRQAIIRALDKKSRLVRLP-------------------GHMGQMVARIAEENNH 198
Query: 490 LSRKLRRFPTYEEISESINANASSVRLAIERNRPVISLDQAMTSRGYISLQHIIPGPDEI 311
L KL R PT +E++ES+ + S++RL +ER++ IS++Q + R ++LQ I+PGPD +
Sbjct: 199 LGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNL 258
Query: 310 TPEALVKKELLKPEIGKLFETLCDREKQILRLHYGLNGESGWSFEEIGRMFKLSRERVRQ 131
TPE +V ++L+K E+ +L TL RE +IL L++GLNGE SFEEIG+ LSRE +RQ
Sbjct: 259 TPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQ 318
Query: 130 INFAALSKIRETNQINDLNYFL 65
N A LSK+++T+ ++ L +L
Sbjct: 319 TNIATLSKLKKTDVLDYLKDYL 340
>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 436
Score = 279 bits (714), Expect = 1e-72
Identities = 149/322 (46%), Positives = 210/322 (65%)
Frame = -3
Query: 1030 PRKSRFMTPKEEATFSWYLKERARIEGVRREVMAEMGGNEVSTKQWAKAAGISLHKLDRI 851
P + +++PKEEA LKE +E V+ +M E +E + KQ A A G +DRI
Sbjct: 134 PLRPGYLSPKEEAELCLCLKEAVLLENVKTRIM-ETQEHEPTNKQLAIAMGTKSGCIDRI 192
Query: 850 LWNGRESEKKITSCYHGLVVSIASSYQGKGLSIQDLTQEGSIGLLHGAIKFNPERGYKLS 671
L RES ++ CY LV+SIA+ YQGKGLS+QDLTQEG+IGLL GA +F P RG+KLS
Sbjct: 193 LCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLS 252
Query: 670 TYAYWWIRQSITRAIANKSRIIRLPXXXXXXXXXXXXXXXXXXXGTISELMPRICEANNA 491
TYAYWWIRQ+I RA+ KSR++RLP G + +++ RI E NN
Sbjct: 253 TYAYWWIRQAIIRALDKKSRLVRLP-------------------GHMGQMVARIAEENNH 293
Query: 490 LSRKLRRFPTYEEISESINANASSVRLAIERNRPVISLDQAMTSRGYISLQHIIPGPDEI 311
L KL R PT +E++ES+ + S++RL +ER++ IS++Q + R ++LQ I+PGPD +
Sbjct: 294 LGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNL 353
Query: 310 TPEALVKKELLKPEIGKLFETLCDREKQILRLHYGLNGESGWSFEEIGRMFKLSRERVRQ 131
TPE +V ++L+K E+ +L TL RE +IL L++GLNGE SFEEIG+ LSRE +RQ
Sbjct: 354 TPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQ 413
Query: 130 INFAALSKIRETNQINDLNYFL 65
N A LSK+++T+ ++ L +L
Sbjct: 414 TNIATLSKLKKTDVLDYLKDYL 435