BLASTX nr result

ID: Scutellaria23_contig00015460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015460
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001765097.1| predicted protein [Physcomitrella patens sub...    78   7e-13
ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group] g...    76   3e-12
gb|AAX94836.1| Major Facilitator Superfamily, putative [Oryza sa...    76   3e-12
ref|NP_178208.1| pre-mRNA-splicing factor CWC22 [Arabidopsis tha...    76   3e-12
ref|XP_003576919.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    76   3e-12

>ref|XP_001765097.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162683684|gb|EDQ70092.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 556

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = +3

Query: 3   FAHLLGTDALPWQCLAYIRLTEEDTTSSSRIFIKILFQDV 122
           FAHLLGTDALPWQ LAYIRLTEEDTTSSSRIFIKILFQ++
Sbjct: 388 FAHLLGTDALPWQALAYIRLTEEDTTSSSRIFIKILFQEL 427


>ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group]
           gi|77554176|gb|ABA96972.1| Pre-mRNA splicing factor
           cwc22, putative, expressed [Oryza sativa Japonica Group]
           gi|113649014|dbj|BAF29526.1| Os12g0256300 [Oryza sativa
           Japonica Group] gi|156622336|emb|CAO82941.1| putative
           pre-mRNA-splicing factor cwc-22 [Oryza sativa Japonica
           Group] gi|215707245|dbj|BAG93705.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 787

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = +3

Query: 3   FAHLLGTDALPWQCLAYIRLTEEDTTSSSRIFIKILFQDV 122
           FAHLLGTDALPW  LAYIRLTEEDTTSSSRIFIKILFQ++
Sbjct: 640 FAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQEL 679


>gb|AAX94836.1| Major Facilitator Superfamily, putative [Oryza sativa Japonica
           Group] gi|77548658|gb|ABA91455.1| Major Facilitator
           Superfamily protein, expressed [Oryza sativa Japonica
           Group]
          Length = 1143

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = +3

Query: 3   FAHLLGTDALPWQCLAYIRLTEEDTTSSSRIFIKILFQDV 122
           FAHLLGTDALPW  LAYIRLTEEDTTSSSRIFIKILFQ++
Sbjct: 536 FAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQEL 575


>ref|NP_178208.1| pre-mRNA-splicing factor CWC22 [Arabidopsis thaliana]
           gi|6503305|gb|AAF14681.1|AC011713_29 Contains similarity
           to gb|U19615 LET 858 gene from Caenorhabditis elegans.
           ESTs gb|AI995150, gb|H76674 and gb|R84035 come from this
           gene [Arabidopsis thaliana] gi|22654971|gb|AAM98078.1|
           At1g80930/F23A5_23 [Arabidopsis thaliana]
           gi|28416525|gb|AAO42793.1| At1g80930/F23A5_23
           [Arabidopsis thaliana] gi|332198347|gb|AEE36468.1|
           pre-mRNA-splicing factor CWC22 [Arabidopsis thaliana]
          Length = 900

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = +3

Query: 3   FAHLLGTDALPWQCLAYIRLTEEDTTSSSRIFIKILFQDV 122
           FAHLLGTDALPW  LAYIRLTEEDTTSSSRIFIKILFQ++
Sbjct: 746 FAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQEL 785


>ref|XP_003576919.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Brachypodium
           distachyon]
          Length = 769

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = +3

Query: 3   FAHLLGTDALPWQCLAYIRLTEEDTTSSSRIFIKILFQDV 122
           FAHLLGTDALPW  LAYIRLTEEDTTSSSRIFIKILFQ++
Sbjct: 627 FAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQEL 666


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