BLASTX nr result
ID: Scutellaria23_contig00015460
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Scutellaria23_contig00015460 (291 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_001765097.1| predicted protein [Physcomitrella patens sub... 78 7e-13 ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group] g... 76 3e-12 gb|AAX94836.1| Major Facilitator Superfamily, putative [Oryza sa... 76 3e-12 ref|NP_178208.1| pre-mRNA-splicing factor CWC22 [Arabidopsis tha... 76 3e-12 ref|XP_003576919.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 76 3e-12 >ref|XP_001765097.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683684|gb|EDQ70092.1| predicted protein [Physcomitrella patens subsp. patens] Length = 556 Score = 78.2 bits (191), Expect = 7e-13 Identities = 37/40 (92%), Positives = 39/40 (97%) Frame = +3 Query: 3 FAHLLGTDALPWQCLAYIRLTEEDTTSSSRIFIKILFQDV 122 FAHLLGTDALPWQ LAYIRLTEEDTTSSSRIFIKILFQ++ Sbjct: 388 FAHLLGTDALPWQALAYIRLTEEDTTSSSRIFIKILFQEL 427 >ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group] gi|77554176|gb|ABA96972.1| Pre-mRNA splicing factor cwc22, putative, expressed [Oryza sativa Japonica Group] gi|113649014|dbj|BAF29526.1| Os12g0256300 [Oryza sativa Japonica Group] gi|156622336|emb|CAO82941.1| putative pre-mRNA-splicing factor cwc-22 [Oryza sativa Japonica Group] gi|215707245|dbj|BAG93705.1| unnamed protein product [Oryza sativa Japonica Group] Length = 787 Score = 75.9 bits (185), Expect = 3e-12 Identities = 36/40 (90%), Positives = 38/40 (95%) Frame = +3 Query: 3 FAHLLGTDALPWQCLAYIRLTEEDTTSSSRIFIKILFQDV 122 FAHLLGTDALPW LAYIRLTEEDTTSSSRIFIKILFQ++ Sbjct: 640 FAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQEL 679 >gb|AAX94836.1| Major Facilitator Superfamily, putative [Oryza sativa Japonica Group] gi|77548658|gb|ABA91455.1| Major Facilitator Superfamily protein, expressed [Oryza sativa Japonica Group] Length = 1143 Score = 75.9 bits (185), Expect = 3e-12 Identities = 36/40 (90%), Positives = 38/40 (95%) Frame = +3 Query: 3 FAHLLGTDALPWQCLAYIRLTEEDTTSSSRIFIKILFQDV 122 FAHLLGTDALPW LAYIRLTEEDTTSSSRIFIKILFQ++ Sbjct: 536 FAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQEL 575 >ref|NP_178208.1| pre-mRNA-splicing factor CWC22 [Arabidopsis thaliana] gi|6503305|gb|AAF14681.1|AC011713_29 Contains similarity to gb|U19615 LET 858 gene from Caenorhabditis elegans. ESTs gb|AI995150, gb|H76674 and gb|R84035 come from this gene [Arabidopsis thaliana] gi|22654971|gb|AAM98078.1| At1g80930/F23A5_23 [Arabidopsis thaliana] gi|28416525|gb|AAO42793.1| At1g80930/F23A5_23 [Arabidopsis thaliana] gi|332198347|gb|AEE36468.1| pre-mRNA-splicing factor CWC22 [Arabidopsis thaliana] Length = 900 Score = 75.9 bits (185), Expect = 3e-12 Identities = 36/40 (90%), Positives = 38/40 (95%) Frame = +3 Query: 3 FAHLLGTDALPWQCLAYIRLTEEDTTSSSRIFIKILFQDV 122 FAHLLGTDALPW LAYIRLTEEDTTSSSRIFIKILFQ++ Sbjct: 746 FAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQEL 785 >ref|XP_003576919.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Brachypodium distachyon] Length = 769 Score = 75.9 bits (185), Expect = 3e-12 Identities = 36/40 (90%), Positives = 38/40 (95%) Frame = +3 Query: 3 FAHLLGTDALPWQCLAYIRLTEEDTTSSSRIFIKILFQDV 122 FAHLLGTDALPW LAYIRLTEEDTTSSSRIFIKILFQ++ Sbjct: 627 FAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQEL 666