BLASTX nr result

ID: Scutellaria23_contig00015457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015457
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533560.1| RING-H2 finger protein ATL5H precursor, puta...    77   1e-12
ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...    73   2e-11
ref|XP_004139190.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    71   8e-11
gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis ...    70   1e-10
ref|XP_003626315.1| RING finger protein [Medicago truncatula] gi...    70   2e-10

>ref|XP_002533560.1| RING-H2 finger protein ATL5H precursor, putative [Ricinus communis]
           gi|223526560|gb|EEF28817.1| RING-H2 finger protein ATL5H
           precursor, putative [Ricinus communis]
          Length = 267

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = +1

Query: 256 SIYIHQCSNSQPYRRAAAAR-GLNPSVIETFPTLSYSEVKDQCRALECTVCLKEFEVNET 432
           SI+I QCS+S+P   A + R GL+P VIE FP L YS VKD  + LEC +CL EFE +ET
Sbjct: 68  SIFIRQCSDSEPRIVAGSKRVGLDPDVIEKFPVLVYSHVKDHVKILECAICLSEFEDDET 127

Query: 433 LRLLP 447
           LRLLP
Sbjct: 128 LRLLP 132


>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
           gi|223548304|gb|EEF49795.1| ring finger protein,
           putative [Ricinus communis]
          Length = 380

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/79 (56%), Positives = 50/79 (63%), Gaps = 15/79 (18%)
 Frame = +1

Query: 256 SIYIHQCSNSQP------------YRRAAAARGLNPSVIETFPTLSYSEVKD---QCRAL 390
           S+YI  C+NS               RRAAAARGL+ +VIETFPTL YSEVK       AL
Sbjct: 62  SVYIRHCANSSNGVSVQGLANGGRSRRAAAARGLDAAVIETFPTLVYSEVKGLKIGKGAL 121

Query: 391 ECTVCLKEFEVNETLRLLP 447
           EC VCL EFE +ETLRLLP
Sbjct: 122 ECAVCLCEFEDDETLRLLP 140


>ref|XP_004139190.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Cucumis sativus]
           gi|449518671|ref|XP_004166360.1| PREDICTED: E3
           ubiquitin-protein ligase ATL6-like [Cucumis sativus]
          Length = 379

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 13/77 (16%)
 Frame = +1

Query: 256 SIYIHQCSNSQPY----------RRAAAARGLNPSVIETFPTLSYSEVKDQ---CRALEC 396
           S+YI  C++SQ            R   A RGL+P+VIETFPTL YS+VK+      ALEC
Sbjct: 65  SVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKSALEC 124

Query: 397 TVCLKEFEVNETLRLLP 447
            VCL EFE +ETLRL+P
Sbjct: 125 AVCLNEFEDDETLRLIP 141


>gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo]
          Length = 379

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 13/77 (16%)
 Frame = +1

Query: 256 SIYIHQCSNS-----QPYRRAA-----AARGLNPSVIETFPTLSYSEVKDQ---CRALEC 396
           S+YI  C++S     +P   AA     A RGL+P+VIETFPTL YS+VK+      ALEC
Sbjct: 65  SVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKSALEC 124

Query: 397 TVCLKEFEVNETLRLLP 447
            VCL EFE +ETLRL+P
Sbjct: 125 AVCLNEFEDDETLRLIP 141


>ref|XP_003626315.1| RING finger protein [Medicago truncatula]
           gi|87240525|gb|ABD32383.1| Zinc finger, RING-type
           [Medicago truncatula] gi|355501330|gb|AES82533.1| RING
           finger protein [Medicago truncatula]
          Length = 361

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/76 (55%), Positives = 46/76 (60%), Gaps = 12/76 (15%)
 Frame = +1

Query: 256 SIYIHQCSNSQPYR---------RAAAARGLNPSVIETFPTLSYSEVKDQ---CRALECT 399
           SIYI +CS+S             R A ARGL+PSVIETFP L YSEVK        LEC 
Sbjct: 62  SIYIRRCSDSPSSNNLLLPITNGRRAVARGLDPSVIETFPILEYSEVKIHKIGKDVLECA 121

Query: 400 VCLKEFEVNETLRLLP 447
           VCL EFE  ETLRL+P
Sbjct: 122 VCLMEFEDTETLRLIP 137


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