BLASTX nr result

ID: Scutellaria23_contig00015343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015343
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531484.1| tryptophan synthase beta chain, putative [Ri...   169   3e-40
ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-...   161   6e-38
ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-...   160   1e-37
ref|XP_002329254.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36
ref|XP_002279124.2| PREDICTED: tryptophan synthase beta chain 2 ...   152   4e-35

>ref|XP_002531484.1| tryptophan synthase beta chain, putative [Ricinus communis]
           gi|223528911|gb|EEF30908.1| tryptophan synthase beta
           chain, putative [Ricinus communis]
          Length = 212

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/115 (69%), Positives = 95/115 (82%)
 Frame = +3

Query: 132 LSCFAPKKRDCHLRFLSGPKASAISTYAADSRAIEVPRQWYNLITDLPVKPPPFLHPKTF 311
           L  FA   +    +F +G +A A ++  AD +AI++PRQWYNL++DLPVKPPP L+PKT 
Sbjct: 29  LGGFALNTKSSPSKFSNGLRARAKASLNADQKAIQIPRQWYNLVSDLPVKPPPALNPKTH 88

Query: 312 EPVKPEDLAPLFPDELIKQEGTNERFIDIPEEVLDVYRLWRPTPLIRAKRLEKLL 476
           EPVKPEDLAPLFPDELIKQE +NE+FIDIPEEVLD+Y LWRPTPLIRAKRLEKLL
Sbjct: 89  EPVKPEDLAPLFPDELIKQEASNEKFIDIPEEVLDIYELWRPTPLIRAKRLEKLL 143


>ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/119 (64%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
 Frame = +3

Query: 123 GQRL-SCFAPKKRDCHLRFLSGPKASAISTYAADSRAIEVPRQWYNLITDLPVKPPPFLH 299
           G++L  C + K+   HLRF +G +  A S    + +A+EVPRQWYNL+ DLPVKPPP LH
Sbjct: 6   GEQLPGCLSLKRVPAHLRFSNGYRTKAASN--PNLKAVEVPRQWYNLVADLPVKPPPPLH 63

Query: 300 PKTFEPVKPEDLAPLFPDELIKQEGTNERFIDIPEEVLDVYRLWRPTPLIRAKRLEKLL 476
           PKT+EP+KPEDL+ LFPDELIKQE + ER+I+IP+EV+D+Y LWRPTPLIRAKRLEKLL
Sbjct: 64  PKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYGLWRPTPLIRAKRLEKLL 122


>ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  160 bits (404), Expect = 1e-37
 Identities = 76/119 (63%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
 Frame = +3

Query: 123 GQRL-SCFAPKKRDCHLRFLSGPKASAISTYAADSRAIEVPRQWYNLITDLPVKPPPFLH 299
           G++L  C + K+   HLRF +G +  A S    + +++EVPRQWYNL+ DLPVKPPP LH
Sbjct: 6   GEQLPGCLSLKRVPAHLRFSNGYRTKAASN--PNLKSVEVPRQWYNLVADLPVKPPPPLH 63

Query: 300 PKTFEPVKPEDLAPLFPDELIKQEGTNERFIDIPEEVLDVYRLWRPTPLIRAKRLEKLL 476
           PKT+EP+KPEDL+ LFPDELIKQE + ER+I+IP+EV+D+Y LWRPTPLIRAKRLEKLL
Sbjct: 64  PKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYGLWRPTPLIRAKRLEKLL 122


>ref|XP_002329254.1| predicted protein [Populus trichocarpa] gi|222870708|gb|EEF07839.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  154 bits (389), Expect = 7e-36
 Identities = 70/102 (68%), Positives = 85/102 (83%)
 Frame = +3

Query: 171 RFLSGPKASAISTYAADSRAIEVPRQWYNLITDLPVKPPPFLHPKTFEPVKPEDLAPLFP 350
           R  +G +  A ++  AD +A+ +P QWYN++ DL VKPPP LHPKTFEPVKPEDL+PLFP
Sbjct: 1   RLSNGGRVRARASLNADLKAVGIPHQWYNVVADLSVKPPPPLHPKTFEPVKPEDLSPLFP 60

Query: 351 DELIKQEGTNERFIDIPEEVLDVYRLWRPTPLIRAKRLEKLL 476
           DELI+QE + ++FIDIPEEVLD+Y LWRPTPLIRAKRLEKLL
Sbjct: 61  DELIRQEASTDKFIDIPEEVLDIYSLWRPTPLIRAKRLEKLL 102


>ref|XP_002279124.2| PREDICTED: tryptophan synthase beta chain 2 [Vitis vinifera]
          Length = 483

 Score =  152 bits (383), Expect = 4e-35
 Identities = 69/87 (79%), Positives = 78/87 (89%)
 Frame = +3

Query: 216 ADSRAIEVPRQWYNLITDLPVKPPPFLHPKTFEPVKPEDLAPLFPDELIKQEGTNERFID 395
           A  +A+E+P QWYNLI DLPVKPPP LHP+T EP+KPEDL+PLFPDELIKQE + +RFI 
Sbjct: 36  AGPQAVEIPHQWYNLIADLPVKPPPALHPQTQEPIKPEDLSPLFPDELIKQEASTDRFIA 95

Query: 396 IPEEVLDVYRLWRPTPLIRAKRLEKLL 476
           IPEEV+DVYRLWRPTPLIRAKRLEKLL
Sbjct: 96  IPEEVIDVYRLWRPTPLIRAKRLEKLL 122


Top