BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015255
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|2...   418   e-114
ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi...   409   e-112
ref|XP_002521729.1| pentatricopeptide repeat-containing protein,...   404   e-110
ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containi...   394   e-107
ref|XP_003612374.1| Pentatricopeptide repeat-containing protein ...   387   e-105

>ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|222856668|gb|EEE94215.1|
            predicted protein [Populus trichocarpa]
          Length = 584

 Score =  418 bits (1074), Expect = e-114
 Identities = 203/307 (66%), Positives = 252/307 (82%)
 Frame = +1

Query: 154  SVLVPTDEQIAHLILEQKSANQALQTFEWASKVPSFRHTVSTYRALIHKLCTFRQFKIVE 333
            S+ VPT E+I HLIL+QKSA QALQTFEWASK+P+F H+ STYRALIHKL TFR+F  V+
Sbjct: 9    SLAVPTHERIVHLILDQKSAPQALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQ 68

Query: 334  QLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVLDMVPKFAKSPPSLKVLNTILD 513
             LLDEMPK IG  PD+ IF+T++RG  RARMIR+VI VLD+V ++ K+P SLK+ N+ILD
Sbjct: 69   HLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNP-SLKIFNSILD 127

Query: 514  VLVKEDIEIAREFYRKKMMGIGIKGDDYTYGILMKGFCLTNRIGDGFKLLQVMKNHGVEV 693
            VLVKEDI++AR+FYRKKMMG GI+GDDYTYGILMKG CLTNRIG+GFKLLQV+K+ G++ 
Sbjct: 128  VLVKEDIDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKP 187

Query: 694  NVVVYNTLIYALCKNGKVGRARSLMNEMEKFSDVTFNILISAYCNESNLVQALVMVEKCF 873
            NVV+YNTL++ALC NGKVGRARSLMNE+++ +DVTFN+LI  YC E N VQALV++EK F
Sbjct: 188  NVVIYNTLLHALCNNGKVGRARSLMNEIKEPNDVTFNVLICGYCKEDNFVQALVLLEKSF 247

Query: 874  NNSFVPDIVALTKLVELLCNVGRISXXXXXXXXXXXXGGTHDVVVYNTLLKGFVKAGKLR 1053
            +  FVPD+V +TK+VE+LCNVGR++            GG  DVV +NTL+KGF K GK++
Sbjct: 248  SLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVK 307

Query: 1054 AGHGFLK 1074
             GHG LK
Sbjct: 308  LGHGLLK 314



 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 76/295 (25%), Positives = 115/295 (38%), Gaps = 45/295 (15%)
 Frame = +1

Query: 271  VSTYRALIHKLCTFRQFKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVL 450
            V  +  LI   C F + K+   LL EM ++ G LP+ D +  ++ GF  + M+    S L
Sbjct: 290  VVAHNTLIKGFCKFGKVKLGHGLLKEMERK-GCLPNADTYNALISGFCESGMLE---SAL 345

Query: 451  DMVPKFAKSPPSLKVLNTILDVLVK--------ED----IEIARE--------------- 549
            DM         +   +    D L+K        ED    +E+  E               
Sbjct: 346  DMFNDMKTDGINCNFVT--FDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSV 403

Query: 550  ---FYRKKMMGIGI-----------KGDDYTYGILMKGFCLTNRIGDGFKLLQVMKNHGV 687
                YRK M+   +           +  D +  IL  GFC    I +  ++   M N G 
Sbjct: 404  LYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRIL--GFCEEGAIQEAKRVYDQMNNEGG 461

Query: 688  EVNVVVYNTLIYALCKNGKVGRARSLMNEMEKFSDV----TFNILISAYCNESNLVQALV 855
              + +VY+ LI+  C+ G V  A  LMNEM          TFN LIS +C       AL 
Sbjct: 462  IPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALK 521

Query: 856  MVEKCFNNSFVPDIVALTKLVELLCNVGRISXXXXXXXXXXXXGGTHDVVVYNTL 1020
            ++E       VPD  + + L++ LC                  G T D +++N+L
Sbjct: 522  LLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSL 576



 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 6/317 (1%)
 Frame = +1

Query: 139  FVAATSVLVPTDEQIAHLILEQKSANQALQTFEWASKVPSFRHTVSTYRALIHKLCTFRQ 318
            F +   VLV  D  +A     +K     +Q  ++            TY  L+  LC   +
Sbjct: 122  FNSILDVLVKEDIDLARKFYRKKMMGAGIQGDDY------------TYGILMKGLCLTNR 169

Query: 319  FKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVLDMVPKFAKSPPSLKVL 498
                 +LL  +  R G  P+  I+ T++        +    S+++ + +     P+    
Sbjct: 170  IGEGFKLLQVIKSR-GLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE-----PNDVTF 223

Query: 499  NTILDVLVKEDIEIAREFYRKKMMGIGIKGDDYTYGILMKGFCLTNRIGDGFKLLQVMKN 678
            N ++    KED  +      +K   +G   D  T   +++  C   R+ +  ++L+ +++
Sbjct: 224  NVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVES 283

Query: 679  HGVEVNVVVYNTLIYALCKNGKVGRARSLMNEMEKFSDV----TFNILISAYCNESNLVQ 846
             G  V+VV +NTLI   CK GKV     L+ EME+   +    T+N LIS +C    L  
Sbjct: 284  KGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLES 343

Query: 847  ALVMVEKCFNNSFVPDIVALTKLVELLCNVGRISXXXXXXXXXXXXGGT--HDVVVYNTL 1020
            AL M      +    + V    L++ L + GR               G     +  YN++
Sbjct: 344  ALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSV 403

Query: 1021 LKGFVKAGKLRAGHGFL 1071
            L G  +   L     FL
Sbjct: 404  LYGLYRKNMLNEALEFL 420


>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
            mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  409 bits (1050), Expect = e-112
 Identities = 203/319 (63%), Positives = 250/319 (78%)
 Frame = +1

Query: 118  VSHIQSRFVAATSVLVPTDEQIAHLILEQKSANQALQTFEWASKVPSFRHTVSTYRALIH 297
            V ++QS+ ++ T V  PT + IAHLILEQKSA+QALQTF WAS +P+F H  STYRALIH
Sbjct: 78   VVNLQSKPISTTPV--PTHQHIAHLILEQKSASQALQTFRWASNLPNFIHNQSTYRALIH 135

Query: 298  KLCTFRQFKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVLDMVPKFAKS 477
            KLC+FR+F+ V+++LDEMP  IGS PD+ IF+T+VRG  RARM+R++I VLD++ KF ++
Sbjct: 136  KLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGEN 195

Query: 478  PPSLKVLNTILDVLVKEDIEIAREFYRKKMMGIGIKGDDYTYGILMKGFCLTNRIGDGFK 657
            P SLK+ N+ILDVLVKEDI++AREFYRKKMM  G+ GDDYT+GILMKG CLTNRIGD FK
Sbjct: 196  P-SLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFK 254

Query: 658  LLQVMKNHGVEVNVVVYNTLIYALCKNGKVGRARSLMNEMEKFSDVTFNILISAYCNESN 837
            LLQVMK+ G   N V+YNT+I+ALCKNGKVGRARSLMNEM + SDVTFN+LISAYC E N
Sbjct: 255  LLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVEPSDVTFNVLISAYCQEEN 314

Query: 838  LVQALVMVEKCFNNSFVPDIVALTKLVELLCNVGRISXXXXXXXXXXXXGGTHDVVVYNT 1017
            LVQALV++EK F+  FVPD+V  TK+V +LC  GR++            GG  DVV YNT
Sbjct: 315  LVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNT 374

Query: 1018 LLKGFVKAGKLRAGHGFLK 1074
            L+KGF   GK + GH  LK
Sbjct: 375  LIKGFCMLGKAKVGHRVLK 393



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 6/251 (2%)
 Frame = +1

Query: 205  KSANQALQTFEWASKVPSFRHTVSTYRALIHKLCTFRQFKIVEQLLDEMPKRIGSLPDDD 384
            K  ++ L+  E    +P+    V TY  L    C          L ++M K  G   +  
Sbjct: 386  KVGHRVLKDMEIKGCLPN----VDTYNILASGYCDSGMLDSAIDLFNDM-KTDGINWNFM 440

Query: 385  IFITVVRGFARARMIREVISVLDMVPKFAKSPPS-LKVLNTILDVLVKED-IEIAREFYR 558
             + T++RG      + +   +L+++ +        +   N+I+  L K++  E A EF  
Sbjct: 441  TYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLT 500

Query: 559  KKMMGIGIKGDDYTYGILMKGFCLTNRIGDGFKLLQVMKNHGVEVNVVVYNTLIYALCKN 738
            K M  +  +  D +  IL  GFC    IGD  ++   M   G   +V+VY  LI+  C++
Sbjct: 501  K-MEKLFPRAVDRSLRIL--GFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQD 557

Query: 739  GKVGRARSLMNEMEKF----SDVTFNILISAYCNESNLVQALVMVEKCFNNSFVPDIVAL 906
            G V  A  L+NEM       +  TFN LISA+C +  +  AL ++E       +PD+ + 
Sbjct: 558  GNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSY 617

Query: 907  TKLVELLCNVG 939
            + +V+ LCN G
Sbjct: 618  SPMVDALCNKG 628



 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 60/271 (22%), Positives = 112/271 (41%), Gaps = 6/271 (2%)
 Frame = +1

Query: 277  TYRALIHKLCTFRQFKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVLDM 456
            T+  L+  LC   +     +LL  M  R G  P+  I+ T++    +   +    S+++ 
Sbjct: 235  TFGILMKGLCLTNRIGDAFKLLQVMKSR-GKTPNTVIYNTMIHALCKNGKVGRARSLMNE 293

Query: 457  VPKFAKSPPSLKVLNTILDVLVKEDIEIAREFYRKKMMGIGIKGDDYTYGILMKGFCLTN 636
            + +     PS    N ++    +E+  +      +K   +G   D  T   ++   C   
Sbjct: 294  MVE-----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAG 348

Query: 637  RIGDGFKLLQVMKNHGVEVNVVVYNTLIYALCKNGKVGRARSLMNEMEKFSDV----TFN 804
            R+ +G ++L+ +++ G  V+VV YNTLI   C  GK      ++ +ME    +    T+N
Sbjct: 349  RVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYN 408

Query: 805  ILISAYCNESNLVQALVMVEKCFNNSFVPDIVALTKLVELLCNVGRI--SXXXXXXXXXX 978
            IL S YC+   L  A+ +      +    + +    L+  LC+ GR+             
Sbjct: 409  ILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEES 468

Query: 979  XXGGTHDVVVYNTLLKGFVKAGKLRAGHGFL 1071
              G    +  YN+++ G  K  +      FL
Sbjct: 469  RGGAGGRISPYNSIIYGLYKKNQFEEALEFL 499



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 72/326 (22%), Positives = 128/326 (39%), Gaps = 45/326 (13%)
 Frame = +1

Query: 211  ANQALQTFEWASKVPSFRHTVSTYRALIHKLCTFRQFKIVEQLLDEMPKRIGSLPDDDIF 390
            A + LQ  +   K P+       Y  +IH LC   +      L++EM +     P D  F
Sbjct: 252  AFKLLQVMKSRGKTPN----TVIYNTMIHALCKNGKVGRARSLMNEMVE-----PSDVTF 302

Query: 391  ITVVRGFARARMIREVISVLDMVPKFAKS-PPSLKVLNTILDVLVK-----EDIEIAREF 552
              ++  + +   + + + +L+    F+    P +     ++ +L K     E +E+    
Sbjct: 303  NVLISAYCQEENLVQALVLLEK--SFSMGFVPDVVTATKVVGILCKAGRVTEGVEVL--- 357

Query: 553  YRKKMMGIGIKGDDYTYGILMKGFCLTNRIGDGFKLLQVMKNHGVEVNVVVYNTLIYALC 732
              +++  +G   D   Y  L+KGFC+  +   G ++L+ M+  G   NV  YN L    C
Sbjct: 358  --ERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYC 415

Query: 733  KNGKVGRARSLMNEME----KFSDVTFNILISAYCNESNLVQALVMVEKC---------- 870
             +G +  A  L N+M+     ++ +T++ LI   C+   +     ++E            
Sbjct: 416  DSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGR 475

Query: 871  ---FN---------NSFVPDIVALTKLVELL-------------CNVGRISXXXXXXXXX 975
               +N         N F   +  LTK+ +L              CN G I          
Sbjct: 476  ISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQM 535

Query: 976  XXXGGTHDVVVYNTLLKGFVKAGKLR 1053
               GG   V+VY  L+ GF + G +R
Sbjct: 536  IKEGGVPSVLVYVCLIHGFCQDGNVR 561



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 8/226 (3%)
 Frame = +1

Query: 277  TYRALIHKLCTFRQ----FKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVIS 444
            TY  LI  LC+  +    FKI+E L++E   R G+      + +++ G  +     E + 
Sbjct: 441  TYDTLIRGLCSGGRMEDGFKILE-LMEE--SRGGAGGRISPYNSIIYGLYKKNQFEEALE 497

Query: 445  VLDMVPKFAKSPPSLKVLNTILDVLVKEDIEIAREFYRKKMMGIGIKGDDYTYGILMKGF 624
             L  + K    P ++     IL    +  I  A+  Y + +   G+      Y  L+ GF
Sbjct: 498  FLTKMEKLF--PRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSV-LVYVCLIHGF 554

Query: 625  CLTNRIGDGFKLLQVMKNHGVEVNVVVYNTLIYALCKNGKVGRARSLMNEMEKFSDV--- 795
            C    + + F+L+  M +HG       +N LI A C  GKVG A  LM +M     +   
Sbjct: 555  CQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDM 614

Query: 796  -TFNILISAYCNESNLVQALVMVEKCFNNSFVPDIVALTKLVELLC 930
             +++ ++ A CN+ +  +A+ +  +      +PD      +  LLC
Sbjct: 615  GSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSM--LLC 658


>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 629

 Score =  404 bits (1038), Expect = e-110
 Identities = 203/338 (60%), Positives = 256/338 (75%)
 Frame = +1

Query: 61   SKIFNLFKFIARFHKRVLPVSHIQSRFVAATSVLVPTDEQIAHLILEQKSANQALQTFEW 240
            SK+ ++F+F  R+     P            S+ VP+ + IAHLIL+Q SA +ALQTF+W
Sbjct: 15   SKLLDIFQF-RRYSSSSTP------------SLSVPSHQHIAHLILDQNSATKALQTFKW 61

Query: 241  ASKVPSFRHTVSTYRALIHKLCTFRQFKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARA 420
            AS +P F H+ STYRALI KLC F +F  V QLLDEMP  IGS PD++IF+TV+RG  RA
Sbjct: 62   ASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRA 121

Query: 421  RMIREVISVLDMVPKFAKSPPSLKVLNTILDVLVKEDIEIAREFYRKKMMGIGIKGDDYT 600
            RMI  VI VLD++ KF K+P SLK+ N+ILDVLVK DI++AREFYRK+MMG G++GDDYT
Sbjct: 122  RMIPHVIKVLDLISKFGKNP-SLKIFNSILDVLVKVDIDVAREFYRKQMMGSGVQGDDYT 180

Query: 601  YGILMKGFCLTNRIGDGFKLLQVMKNHGVEVNVVVYNTLIYALCKNGKVGRARSLMNEME 780
            + ILMKG CLTNRIGDGF+LLQVMK+ GV+ N VVYNTL++ALCKNGKVGRARSLM+E+E
Sbjct: 181  FAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIE 240

Query: 781  KFSDVTFNILISAYCNESNLVQALVMVEKCFNNSFVPDIVALTKLVELLCNVGRISXXXX 960
            + +DVTFN+LI+AYC E NLVQALV++EK F+  FVPD+V +TK+VE+LCN GR++    
Sbjct: 241  EPNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVE 300

Query: 961  XXXXXXXXGGTHDVVVYNTLLKGFVKAGKLRAGHGFLK 1074
                    GG  DVV YNTLL+GF + GK++  H FLK
Sbjct: 301  MLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLK 338



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 5/278 (1%)
 Frame = +1

Query: 205  KSANQALQTFEWASKVPSFRHTVSTYRALIHKLCTFRQFKIVEQLLDEMPKRIGSLPDDD 384
            K A++ L+  E    +P+    V TY  LI   C    F +   + ++M K  G   + D
Sbjct: 331  KVAHRFLKEMERKGCLPN----VETYNILISGFCDSGMFDMALDMFNDM-KTDGISWNFD 385

Query: 385  IFITVVRGFARARMIREVISVLDMVPKF-AKSPPSLKVLNTILDVLVKEDIEIAREFYRK 561
             + T+++G      I E + +L+++ +    S   +   N++L  L K+++      +  
Sbjct: 386  TYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLM 445

Query: 562  KMMGIGIKGDDYTYGILMKGFCLTNRIGDGFKLLQVMKNHGVEVNVVVYNTLIYALCKNG 741
            KM  +  +  D +  IL  GFC    + +   +   M N G   N++VY+ L++  C+ G
Sbjct: 446  KMEKLFPRAVDRSLRIL--GFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEG 503

Query: 742  KVGRARSLMNEMEKFSDVT----FNILISAYCNESNLVQALVMVEKCFNNSFVPDIVALT 909
             +  A  LMNEM           FN LI  +C +     AL +++       VPD    +
Sbjct: 504  NLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYS 563

Query: 910  KLVELLCNVGRISXXXXXXXXXXXXGGTHDVVVYNTLL 1023
             L++ LC  G               G T D   +N+LL
Sbjct: 564  PLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLL 601



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 69/286 (24%), Positives = 119/286 (41%), Gaps = 22/286 (7%)
 Frame = +1

Query: 277  TYRALIHKLCTFRQFKIVEQL-LDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVLD 453
            T+  LI   C  ++  +V+ L L E    +G +PD      VV     A  + E + +L+
Sbjct: 246  TFNVLIAAYC--KEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLE 303

Query: 454  MVPKFAKSPPSLKVLNTILDVLVK-EDIEIAREFYRKKMMGIGIKGDDYTYGILMKGFCL 630
             V ++      +   NT+L    +   I++A  F  K+M   G   +  TY IL+ GFC 
Sbjct: 304  RV-EYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFL-KEMERKGCLPNVETYNILISGFCD 361

Query: 631  TNRIGDGFKLLQVMKNHGVEVNVVVYNTLIYALCKNGKVGRARSLMNEMEK--------- 783
            +        +   MK  G+  N   Y+TLI  L   G++     ++  ME+         
Sbjct: 362  SGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRI 421

Query: 784  --FSDVTFNILISAYCNESNLVQALVMVEKCFNNSFVPDIVALTKLVELLCNVGRISXXX 957
              ++ V + +      +E+  ++ L+ +EK F     P  V  +  +   C  G +    
Sbjct: 422  SPYNSVLYGLYKKNMWDEA--LEFLMKMEKLF-----PRAVDRSLRILGFCEKGAVKNAK 474

Query: 958  XXXXXXXXXGGTHDVVVYNTLLKGFVKAGKLR---------AGHGF 1068
                     GGT +++VY+ L+ GF + G LR          GHG+
Sbjct: 475  MVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGY 520



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 4/244 (1%)
 Frame = +1

Query: 139 FVAATSVLVPTDEQIAHLILEQKSANQALQTFEWASKVPSFRHTVSTYRALIHKLCTFRQ 318
           F +   VLV  D  +A     ++     +Q  ++            T+  L+  LC   +
Sbjct: 146 FNSILDVLVKVDIDVAREFYRKQMMGSGVQGDDY------------TFAILMKGLCLTNR 193

Query: 319 FKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVLDMVPKFAKSPPSLKVL 498
                +LL  M  R G  P+  ++ T++    +   +    S++D + +     P+    
Sbjct: 194 IGDGFRLLQVMKSR-GVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEE-----PNDVTF 247

Query: 499 NTILDVLVKEDIEIAREFYRKKMMGIGIKGDDYTYGILMKGFCLTNRIGDGFKLLQVMKN 678
           N ++    KE+  +      +K   +G   D  T   +++  C   R+ +  ++L+ ++ 
Sbjct: 248 NVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEY 307

Query: 679 HGVEVNVVVYNTLIYALCKNGKVGRARSLMNEMEKFSDV----TFNILISAYCNESNLVQ 846
            G  V+VV YNTL+   C+ GK+  A   + EME+   +    T+NILIS +C+      
Sbjct: 308 KGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDM 367

Query: 847 ALVM 858
           AL M
Sbjct: 368 ALDM 371



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 4/232 (1%)
 Frame = +1

Query: 376  DDDIFITVVRGFARARMIREVISVLDMVPKFAKSPPSLKVLNTILDVLVKEDIEIAREFY 555
            DD  F  +++G      I +   +L ++ K     P+  V NT+L  L K   ++ R   
Sbjct: 177  DDYTFAILMKGLCLTNRIGDGFRLLQVM-KSRGVKPNAVVYNTLLHALCKNG-KVGRA-- 232

Query: 556  RKKMMGIGIKGDDYTYGILMKGFCLTNRIGDGFKLLQVMKNHGVEVNVVVYNTLIYALCK 735
             + +M    + +D T+ +L+  +C    +     LL+   + G   +VV    ++  LC 
Sbjct: 233  -RSLMDEIEEPNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCN 291

Query: 736  NGKVGRARSLMNEMEKFSD----VTFNILISAYCNESNLVQALVMVEKCFNNSFVPDIVA 903
             G+V  A  ++  +E        V +N L+  +C    +  A   +++      +P++  
Sbjct: 292  AGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVET 351

Query: 904  LTKLVELLCNVGRISXXXXXXXXXXXXGGTHDVVVYNTLLKGFVKAGKLRAG 1059
               L+   C+ G               G + +   Y+TL+KG    G++  G
Sbjct: 352  YNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEG 403


>ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
            mitochondrial-like [Glycine max]
          Length = 618

 Score =  394 bits (1011), Expect = e-107
 Identities = 200/321 (62%), Positives = 245/321 (76%), Gaps = 3/321 (0%)
 Frame = +1

Query: 121  SHIQSRFVAAT---SVLVPTDEQIAHLILEQKSANQALQTFEWASKVPSFRHTVSTYRAL 291
            +H   RF   T   S   P+ E ++ LIL+QKSA++AL+ F WAS VP+F H+ STYRAL
Sbjct: 16   THFLRRFQFQTHSSSSSAPSQEHVSQLILDQKSASEALEYFRWASTVPNFVHSQSTYRAL 75

Query: 292  IHKLCTFRQFKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVLDMVPKFA 471
            IHKLCTFR+F  V+QLLDEMP  +G+ P DDIFIT++RG  RARM R VI VLD+V KF 
Sbjct: 76   IHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFH 135

Query: 472  KSPPSLKVLNTILDVLVKEDIEIAREFYRKKMMGIGIKGDDYTYGILMKGFCLTNRIGDG 651
             SP SLK+ N+ILDVLVKEDI++AREFYRK MM  G++GDDYT+GILMKG CLTNRIG+G
Sbjct: 136  GSP-SLKIFNSILDVLVKEDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEG 194

Query: 652  FKLLQVMKNHGVEVNVVVYNTLIYALCKNGKVGRARSLMNEMEKFSDVTFNILISAYCNE 831
            FKLLQ++K+ GV  N VVYNTL++ALC+NGKVGRAR+LMNEME  +DVTFNILIS YC E
Sbjct: 195  FKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMEDPNDVTFNILISGYCKE 254

Query: 832  SNLVQALVMVEKCFNNSFVPDIVALTKLVELLCNVGRISXXXXXXXXXXXXGGTHDVVVY 1011
             N VQALV++EK F+  FVPD+V++TK++E+LCN GR              GG  DVV Y
Sbjct: 255  GNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAY 314

Query: 1012 NTLLKGFVKAGKLRAGHGFLK 1074
            NTL+KGF  AGK++ G  FLK
Sbjct: 315  NTLIKGFCGAGKVKVGLHFLK 335



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 76/299 (25%), Positives = 119/299 (39%), Gaps = 41/299 (13%)
 Frame = +1

Query: 280  YRALIHKLCTFRQFKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVLDMV 459
            Y  L+H LC   +      L++EM       P+D  F  ++ G+ +     + + +L+  
Sbjct: 213  YNTLLHALCRNGKVGRARNLMNEMED-----PNDVTFNILISGYCKEGNSVQALVLLEKS 267

Query: 460  PKFAKSPPSLKVLNTILDVLVK--EDIEIAREFYRKKMMGIGIKGDDYTYGILMKGFCLT 633
                  P  + V   +L++L      +E A    R + MG G+  D   Y  L+KGFC  
Sbjct: 268  FSMGFVPDVVSVTK-VLEILCNAGRTMEAAEVLERVESMG-GLL-DVVAYNTLIKGFCGA 324

Query: 634  NRIGDGFKLLQVMKNHGVEVNVVVYNTLIYALCKNGKVGRARSLMNEME----KFSDVTF 801
             ++  G   L+ M+N G   NV  YN LI    ++G +  A  L N+M+    K++ VTF
Sbjct: 325  GKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTF 384

Query: 802  NILISAYCNESNLVQALVMVE-------------KCFN---------NSFVPDIVALTKL 915
            + LI   C+E  +     ++E               +N         N F      LTK+
Sbjct: 385  DTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKM 444

Query: 916  VELL-------------CNVGRISXXXXXXXXXXXXGGTHDVVVYNTLLKGFVKAGKLR 1053
              L              C  G I             GG   ++VYN L+ GF K G +R
Sbjct: 445  GNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVR 503



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 5/256 (1%)
 Frame = +1

Query: 271  VSTYRALIHKLCTFRQFKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVL 450
            V TY  LI          +   L ++M K  G   +   F T++RG      I +  S+L
Sbjct: 346  VDTYNVLISGFSESGMLDLALDLFNDM-KTDGIKWNFVTFDTLIRGLCSEERIEDGFSIL 404

Query: 451  DMVPKFAK-SPPSLKVLNTILDVLVKEDIEIAREFYRKKMMGIGIKGDDYTYGILMKGFC 627
            +++ +  + S   +   N+I+  L+K++       +  KM  +  +  D +  IL    C
Sbjct: 405  ELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEH--C 462

Query: 628  LTNRIGDGFKLLQVMKNHGVEVNVVVYNTLIYALCKNGKVGRARSLMNEMEKFS----DV 795
                I D  ++   M + G   +++VYN L++   K G V  A  LMNEM   +      
Sbjct: 463  KKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPS 522

Query: 796  TFNILISAYCNESNLVQALVMVEKCFNNSFVPDIVALTKLVELLCNVGRISXXXXXXXXX 975
            TFN +I+ +C +  +  AL +VE       VP+    + L+++LC  G +          
Sbjct: 523  TFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQM 582

Query: 976  XXXGGTHDVVVYNTLL 1023
               G   D+ ++N+LL
Sbjct: 583  VDKGILPDLFIWNSLL 598


>ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355513709|gb|AES95332.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  387 bits (995), Expect = e-105
 Identities = 194/318 (61%), Positives = 244/318 (76%)
 Frame = +1

Query: 121  SHIQSRFVAATSVLVPTDEQIAHLILEQKSANQALQTFEWASKVPSFRHTVSTYRALIHK 300
            SH QS + +++S L PT + +  LIL+QK++++ALQTF WAS    F H+ STYR LIHK
Sbjct: 22   SHFQSHYSSSSS-LPPTQDHLCQLILDQKTSSEALQTFRWASTFSKFTHSQSTYRTLIHK 80

Query: 301  LCTFRQFKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVLDMVPKFAKSP 480
            LC FR+F  V+QLLDEMP  IG+ P +DIFIT+VRG +RA M R VI+VLD+  KF    
Sbjct: 81   LCIFRRFDTVKQLLDEMPTSIGANPGEDIFITIVRGLSRAGMTRRVITVLDLAYKF-HGT 139

Query: 481  PSLKVLNTILDVLVKEDIEIAREFYRKKMMGIGIKGDDYTYGILMKGFCLTNRIGDGFKL 660
            PSLK+ N+ILDVLVKEDI++AREFYRK MM  G++GDDYT+GILMKG CLTNRIG+GFKL
Sbjct: 140  PSLKIFNSILDVLVKEDIDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKL 199

Query: 661  LQVMKNHGVEVNVVVYNTLIYALCKNGKVGRARSLMNEMEKFSDVTFNILISAYCNESNL 840
            LQ++KN+GV  N V+YNTL++ALC+NGKVGRARSLMNEM   ++VTFNILIS+Y  E NL
Sbjct: 200  LQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEMVDPNEVTFNILISSYYKEENL 259

Query: 841  VQALVMVEKCFNNSFVPDIVALTKLVELLCNVGRISXXXXXXXXXXXXGGTHDVVVYNTL 1020
            VQALV++EKCF  S VPD+V +TK+VE+LCN GR++            GG+ D V YNTL
Sbjct: 260  VQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTL 319

Query: 1021 LKGFVKAGKLRAGHGFLK 1074
            +KGF   GK++ G  FLK
Sbjct: 320  IKGFCGVGKVKVGLHFLK 337



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 6/257 (2%)
 Frame = +1

Query: 271  VSTYRALIHKLCTFRQFKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVL 450
            V TY  LI+  C  R   +   L ++M K  G   +   F T++RG      I +  S+L
Sbjct: 348  VDTYNILIYGFCESRMLDLALDLFNDM-KTDGINRNFVTFDTMIRGLCSEGRIEDGFSIL 406

Query: 451  DMVPKFAK-SPPSLKVLNTILDVLVKED-IEIAREFYRKKMMGIGIKGDDYTYGILMKGF 624
            +++ +  + S   +   N+I+  L K++  + A EF  K M  +  +  D +  I+ K  
Sbjct: 407  ELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAK-MGKLFPRAVDRSMTIIQK-- 463

Query: 625  CLTNRIGDGFKLLQVMKNHGVEVNVVVYNTLIYALCKNGKVGRARSLMNEMEKFSDV--- 795
            C    I D   +   M + G   +++VYN+L++   ++G +  A  L+NEM   +     
Sbjct: 464  CKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIA 523

Query: 796  -TFNILISAYCNESNLVQALVMVEKCFNNSFVPDIVALTKLVELLCNVGRISXXXXXXXX 972
             TFN +I+ +C +  +  AL  +E       VP+    + L+++LC  G I         
Sbjct: 524  STFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVFLE 583

Query: 973  XXXXGGTHDVVVYNTLL 1023
                G   D  ++ +LL
Sbjct: 584  MVEKGILPDQCIWKSLL 600



 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 67/298 (22%), Positives = 118/298 (39%), Gaps = 40/298 (13%)
 Frame = +1

Query: 280  YRALIHKLCTFRQFKIVEQLLDEMPKRIGSLPDDDIFITVVRGFARARMIREVISVLDMV 459
            Y  L+H LC   +      L++EM       P++  F  ++  + +   + + + +L+  
Sbjct: 215  YNTLLHALCRNGKVGRARSLMNEMVD-----PNEVTFNILISSYYKEENLVQALVLLEKC 269

Query: 460  PKFAKS-PPSLKVLNTILDVLVKEDIEIAREFYRKKMMGIGIKGDDYTYGILMKGFCLTN 636
              FA S  P +  +  ++++L             +++  +G   D   Y  L+KGFC   
Sbjct: 270  --FALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVG 327

Query: 637  RIGDGFKLLQVMKNHGVEVNVVVYNTLIYALCKNGKVGRARSLMNEME----KFSDVTFN 804
            ++  G   L+ M+N G   NV  YN LIY  C++  +  A  L N+M+      + VTF+
Sbjct: 328  KVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFD 387

Query: 805  ILISAYCNESNLVQALVMVE-------------KCFN---------NSFVPDIVALTKLV 918
             +I   C+E  +     ++E               +N         N F      L K+ 
Sbjct: 388  TMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMG 447

Query: 919  ELL-------------CNVGRISXXXXXXXXXXXXGGTHDVVVYNTLLKGFVKAGKLR 1053
            +L              C  G I             GG   ++VYN+L+ GF + G +R
Sbjct: 448  KLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIR 505