BLASTX nr result

ID: Scutellaria23_contig00015249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015249
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-ter...   336   5e-90
ref|XP_002322116.1| predicted protein [Populus trichocarpa] gi|2...   335   6e-90
ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis] g...   331   1e-88
ref|XP_004137380.1| PREDICTED: RNA polymerase II subunit A C-ter...   327   3e-87
ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arab...   326   5e-87

>ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72 [Vitis vinifera]
           gi|296083946|emb|CBI24334.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  336 bits (861), Expect = 5e-90
 Identities = 157/193 (81%), Positives = 179/193 (92%)
 Frame = +1

Query: 13  MRLRHAMVCSSNQNRSMEAHALLKREGFDVASYGTGQHVKLPGPSLREPNVYDFGTPYKQ 192
           M+ R+AMVCSSNQNRSMEAH+LLK++GFDV+SYGTG HVKLPGPSLREPNVY+FGTPYK 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKH 60

Query: 193 MLDDLRRKDPELYRRNGILPMLKRNVGVKTAPQRWQDNAADGTFDVVLTFEEKVFDMVLE 372
           M DDLRRKDP+LY+RNGILPMLKRN  VKTAPQRWQDNAADG FDVV TFEEKVFDMV+E
Sbjct: 61  MFDDLRRKDPDLYKRNGILPMLKRNSSVKTAPQRWQDNAADGPFDVVFTFEEKVFDMVVE 120

Query: 373 DLHNRNHMLLKPVLVINLEVKDNHEEAAIGGRLALQLCQEIEATENWEESIDDVIINFER 552
           DLHNR+H+L+K VLVINLEVKDNHEEAAIG RLAL LCQEIEATE+WE+S+DDV+  FE+
Sbjct: 121 DLHNRDHVLMKTVLVINLEVKDNHEEAAIGARLALDLCQEIEATESWEDSVDDVVSGFEK 180

Query: 553 HNQRKLVYSISYY 591
            ++RKL+YSIS+Y
Sbjct: 181 QHRRKLLYSISFY 193


>ref|XP_002322116.1| predicted protein [Populus trichocarpa] gi|222869112|gb|EEF06243.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  335 bits (860), Expect = 6e-90
 Identities = 159/193 (82%), Positives = 178/193 (92%)
 Frame = +1

Query: 13  MRLRHAMVCSSNQNRSMEAHALLKREGFDVASYGTGQHVKLPGPSLREPNVYDFGTPYKQ 192
           M+ R+AMVCSSNQNRSMEAH+LLKR GFDV+SYGTG HVKLPGPSLREPNVYDFGTPYKQ
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 193 MLDDLRRKDPELYRRNGILPMLKRNVGVKTAPQRWQDNAADGTFDVVLTFEEKVFDMVLE 372
           M DDLRRKDPELY+RNGILPMLKRN GVK APQRWQDNAADG+F VV TFEEKVFDMVLE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNAADGSFSVVFTFEEKVFDMVLE 120

Query: 373 DLHNRNHMLLKPVLVINLEVKDNHEEAAIGGRLALQLCQEIEATENWEESIDDVIINFER 552
           DLHNR+H+LLK VLVINLEVKDNHEEAA+GG+L L+LCQ+IEA E+WE+SID++I  FE 
Sbjct: 121 DLHNRDHVLLKSVLVINLEVKDNHEEAAVGGQLTLELCQKIEAVESWEDSIDEIITAFEA 180

Query: 553 HNQRKLVYSISYY 591
            ++RKLVYSIS+Y
Sbjct: 181 KHRRKLVYSISFY 193


>ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis]
           gi|223545267|gb|EEF46774.1| Protein SSU72, putative
           [Ricinus communis]
          Length = 193

 Score =  331 bits (849), Expect = 1e-88
 Identities = 155/193 (80%), Positives = 179/193 (92%)
 Frame = +1

Query: 13  MRLRHAMVCSSNQNRSMEAHALLKREGFDVASYGTGQHVKLPGPSLREPNVYDFGTPYKQ 192
           M+LR+AMVCSSNQNRSMEAH+LLK +GFDV+SYGTG HVKLPGPSLREPNVYDFGTPYKQ
Sbjct: 1   MKLRYAMVCSSNQNRSMEAHSLLKMQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 193 MLDDLRRKDPELYRRNGILPMLKRNVGVKTAPQRWQDNAADGTFDVVLTFEEKVFDMVLE 372
           M DDLRRKDP+LY+RNGILPMLKRN  VK APQRWQDNAADG+FDVV +FEEKVFDMV+E
Sbjct: 61  MFDDLRRKDPDLYKRNGILPMLKRNSSVKLAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120

Query: 373 DLHNRNHMLLKPVLVINLEVKDNHEEAAIGGRLALQLCQEIEATENWEESIDDVIINFER 552
           DLHNR+H+L++ VLVINLEVKDNHEEAAIG RLAL+LCQEIEA E+WE+SID++I  FE 
Sbjct: 121 DLHNRDHVLMRSVLVINLEVKDNHEEAAIGARLALELCQEIEAAESWEDSIDEIITAFET 180

Query: 553 HNQRKLVYSISYY 591
            ++RKL+YS+S+Y
Sbjct: 181 KHRRKLLYSVSFY 193


>ref|XP_004137380.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72-like [Cucumis sativus]
           gi|449506693|ref|XP_004162820.1| PREDICTED: RNA
           polymerase II subunit A C-terminal domain phosphatase
           SSU72-like [Cucumis sativus]
          Length = 193

 Score =  327 bits (837), Expect = 3e-87
 Identities = 151/193 (78%), Positives = 175/193 (90%)
 Frame = +1

Query: 13  MRLRHAMVCSSNQNRSMEAHALLKREGFDVASYGTGQHVKLPGPSLREPNVYDFGTPYKQ 192
           M+ R+AMVCSSNQNRSMEAH++LK +GF+V+SYGTG HVKLPGPSLREPNVYDFGTPYK 
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 193 MLDDLRRKDPELYRRNGILPMLKRNVGVKTAPQRWQDNAADGTFDVVLTFEEKVFDMVLE 372
           M DDLRRKDPELY+RNGILPMLKRN  VKTAPQRWQDNAADG+FDVV TFEEKVFDMV+E
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGSFDVVFTFEEKVFDMVIE 120

Query: 373 DLHNRNHMLLKPVLVINLEVKDNHEEAAIGGRLALQLCQEIEATENWEESIDDVIINFER 552
           DL+ R+H ++K VL++NLEVKDNHEEAAIG RL   LCQEIE TE+WE+SIDD++INFE+
Sbjct: 121 DLNTRDHAMMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEDSIDDIVINFEK 180

Query: 553 HNQRKLVYSISYY 591
             +RKL+YSIS+Y
Sbjct: 181 QLRRKLLYSISFY 193


>ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arabidopsis lyrata subsp.
           lyrata] gi|297334789|gb|EFH65207.1| hypothetical protein
           ARALYDRAFT_895246 [Arabidopsis lyrata subsp. lyrata]
          Length = 193

 Score =  326 bits (835), Expect = 5e-87
 Identities = 153/193 (79%), Positives = 173/193 (89%)
 Frame = +1

Query: 13  MRLRHAMVCSSNQNRSMEAHALLKREGFDVASYGTGQHVKLPGPSLREPNVYDFGTPYKQ 192
           MR R+AMVCSSNQNRSMEAHALLKR+G DVASYGTG HVKLPGPS+REPNVYDFGTPYKQ
Sbjct: 1   MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSVREPNVYDFGTPYKQ 60

Query: 193 MLDDLRRKDPELYRRNGILPMLKRNVGVKTAPQRWQDNAADGTFDVVLTFEEKVFDMVLE 372
           M D+LRRKDPELY+RNGIL MLKRN+ VK APQRWQDNA DG FDVV+TFEEKVFD VLE
Sbjct: 61  MFDELRRKDPELYKRNGILQMLKRNLSVKLAPQRWQDNAGDGVFDVVMTFEEKVFDSVLE 120

Query: 373 DLHNRNHMLLKPVLVINLEVKDNHEEAAIGGRLALQLCQEIEATENWEESIDDVIINFER 552
           DL+NR   L+K +LV+NLEVKDNHEEAAIGGRLAL+LCQEIE  E WE++IDD++  FE+
Sbjct: 121 DLNNREQSLMKTILVMNLEVKDNHEEAAIGGRLALELCQEIEGNETWEDTIDDIVAGFEK 180

Query: 553 HNQRKLVYSISYY 591
            ++RKLVYSIS+Y
Sbjct: 181 QHRRKLVYSISFY 193


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