BLASTX nr result

ID: Scutellaria23_contig00015193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015193
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum] gi...   176   3e-42
ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinife...   166   5e-39
ref|XP_002513076.1| conserved hypothetical protein [Ricinus comm...   164   1e-38
gb|AFK39958.1| unknown [Medicago truncatula]                          159   4e-37
ref|XP_003598632.1| F-box protein SKIP5 [Medicago truncatula] gi...   159   4e-37

>ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum]
           gi|15777895|gb|AAL05932.1| SKIP5-like protein [Solanum
           lycopersicum]
          Length = 265

 Score =  176 bits (447), Expect = 3e-42
 Identities = 86/115 (74%), Positives = 100/115 (86%), Gaps = 3/115 (2%)
 Frame = +3

Query: 3   ALEFLSTCKLANLTVRAELGCCLLHRSGRLTIDGCILQCESDPLDHLSHAIVTTASE--- 173
           ALEF+STCKLANLTVR ELGCCLLHRSG+LT+DGCILQCES+PLDHLS+AI++TA     
Sbjct: 136 ALEFMSTCKLANLTVRTELGCCLLHRSGKLTVDGCILQCESNPLDHLSYAIISTAGAAEV 195

Query: 174 IPPIIKNSGDRVTVMQTRIEGGAKAVLTSGTLSLQKVRVIYTRTSLFFWFNIEHS 338
           IP  +K   D V+V++T+I GGAKAVLTSGTLSLQ+VRVIYTRTSLFFWF +E S
Sbjct: 196 IPSALKTCSDAVSVLKTQIAGGAKAVLTSGTLSLQRVRVIYTRTSLFFWFEVEGS 250


>ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinifera]
           gi|297742690|emb|CBI35143.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  166 bits (419), Expect = 5e-39
 Identities = 81/113 (71%), Positives = 100/113 (88%), Gaps = 3/113 (2%)
 Frame = +3

Query: 3   ALEFLSTCKLANLTVRAELGCCLLHRSGRLTIDGCILQCESDPLDHLSHAIVTTASE--- 173
           ALEFLSTCK+ANLTV+AELGCCLLHRSGRLTIDGCILQCES+PLD+LS  IV+TA+    
Sbjct: 140 ALEFLSTCKVANLTVKAELGCCLLHRSGRLTIDGCILQCESNPLDYLSCPIVSTAAGPEI 199

Query: 174 IPPIIKNSGDRVTVMQTRIEGGAKAVLTSGTLSLQKVRVIYTRTSLFFWFNIE 332
           +   +K+ GD V+V +TRIEGGAKAV+TSG+L+LQ+VRVIY RTS+FFWF+++
Sbjct: 200 LTSSVKSHGDSVSVSRTRIEGGAKAVVTSGSLALQRVRVIYARTSIFFWFDVD 252


>ref|XP_002513076.1| conserved hypothetical protein [Ricinus communis]
           gi|223548087|gb|EEF49579.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  164 bits (415), Expect = 1e-38
 Identities = 81/114 (71%), Positives = 97/114 (85%), Gaps = 3/114 (2%)
 Frame = +3

Query: 3   ALEFLSTCKLANLTVRAELGCCLLHRSGRLTIDGCILQCESDPLDHLSHAIVTTASE--- 173
           ALEFLSTCKLANLTV+AELGCCLLHRSG+LTID C+LQCESDPLD+LS  IV+TA +   
Sbjct: 136 ALEFLSTCKLANLTVKAELGCCLLHRSGKLTIDSCVLQCESDPLDYLSCPIVSTAGKHEV 195

Query: 174 IPPIIKNSGDRVTVMQTRIEGGAKAVLTSGTLSLQKVRVIYTRTSLFFWFNIEH 335
           +   +K +GD VTV QTRIEGGAKAVLT+G L LQ+VRVIY+RT ++FWF++ H
Sbjct: 196 LSAPMKTNGDSVTVSQTRIEGGAKAVLTNGDLVLQRVRVIYSRTYVYFWFDVGH 249


>gb|AFK39958.1| unknown [Medicago truncatula]
          Length = 141

 Score =  159 bits (403), Expect = 4e-37
 Identities = 82/114 (71%), Positives = 95/114 (83%), Gaps = 4/114 (3%)
 Frame = +3

Query: 3   ALEFLSTCKLANLTVRAELGCCLLHRSGRLTIDGCILQCESDPLDHLSHAIVTTA--SEI 176
           A EFLS CKL+NLTV+AELGCCLLHRSGRLTIDGC+LQCES+PLD LS  I++TA  S++
Sbjct: 26  AFEFLSNCKLSNLTVKAELGCCLLHRSGRLTIDGCVLQCESNPLDFLSCPIISTANSSDM 85

Query: 177 PPIIKNS--GDRVTVMQTRIEGGAKAVLTSGTLSLQKVRVIYTRTSLFFWFNIE 332
            P   NS  GD V V QTRIEGGAKAVLTSG L+LQ+VRV+Y RTSL FWF++E
Sbjct: 86  VPSQTNSNNGDGVFVSQTRIEGGAKAVLTSGDLALQRVRVVYARTSLLFWFDVE 139


>ref|XP_003598632.1| F-box protein SKIP5 [Medicago truncatula]
           gi|355487680|gb|AES68883.1| F-box protein SKIP5
           [Medicago truncatula]
          Length = 141

 Score =  159 bits (403), Expect = 4e-37
 Identities = 82/114 (71%), Positives = 95/114 (83%), Gaps = 4/114 (3%)
 Frame = +3

Query: 3   ALEFLSTCKLANLTVRAELGCCLLHRSGRLTIDGCILQCESDPLDHLSHAIVTTA--SEI 176
           A EFLS CKL+NLTV+AELGCCLLHRSGRLTIDGC+LQCES+PLD LS  I++TA  S++
Sbjct: 26  AFEFLSNCKLSNLTVKAELGCCLLHRSGRLTIDGCVLQCESNPLDFLSCPIISTANSSDM 85

Query: 177 PPIIKNS--GDRVTVMQTRIEGGAKAVLTSGTLSLQKVRVIYTRTSLFFWFNIE 332
            P   NS  GD V V QTRIEGGAKAVLTSG L+LQ+VRV+Y RTSL FWF++E
Sbjct: 86  VPSQTNSNNGDGVFVSQTRIEGGAKAVLTSGDLALQRVRVVYARTSLLFWFDVE 139


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