BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00015096
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]   311   5e-83
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi...   311   7e-83
ref|XP_002530223.1| pentatricopeptide repeat-containing protein,...   303   3e-80
ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|2...   300   2e-79
ref|NP_194398.1| pentatricopeptide repeat-containing protein [Ar...   283   3e-74

>emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
          Length = 483

 Score =  311 bits (798), Expect = 5e-83
 Identities = 152/221 (68%), Positives = 184/221 (83%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KLE A+++F +ME  G S ++ SYN LIAGYCNKGLL+S MKLK +MEK+GVRP+DVT+N
Sbjct: 196 KLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFN 255

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
           TL+N  C+ GKLHEANK+FSEMK  +V P TITYNTLINGYS+ G SEM  R+ +EM   
Sbjct: 256 TLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRN 315

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           GIKADILTYNA+I+GLC EG+TKKAA++VKELD + LVPNSSTF+ALITGQ VR N+ RA
Sbjct: 316 GIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERA 375

Query: 543 FQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
           FQLYKSM++SGCHPN   FKMLIS F KNED+DGA +V++E
Sbjct: 376 FQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVRE 416



 Score =  110 bits (274), Expect = 3e-22
 Identities = 67/221 (30%), Positives = 110/221 (49%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KL  A+ +F +M++ G    V S N  I+   +      A+     M++  + PN  T N
Sbjct: 126 KLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLN 185

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
            +M   CK GKL +A ++F +M+ M  +PT  +YNTLI GY   G     M++   M   
Sbjct: 186 MVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKN 245

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           G++ D +T+N +I G C+ GK  +A  +  E+    +VPN+ T+  LI G S   N+   
Sbjct: 246 GVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMG 305

Query: 543 FQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
            +L+  M+++G   +   +  LI           AA ++KE
Sbjct: 306 GRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKE 346



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 53/187 (28%), Positives = 93/187 (49%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KL  A ++F+EM+   +  + ++YN LI GY   G      +L + M ++G++ + +TYN
Sbjct: 266 KLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYN 325

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
            L+  LC EG+  +A  L  E+ R  + P + T++ LI G      SE   ++ + M  +
Sbjct: 326 ALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRS 385

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           G   +  T+  +I   CK      A  +V+E+  + + P+S T + L  G  +      A
Sbjct: 386 GCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELA 445

Query: 543 FQLYKSM 563
            +L K M
Sbjct: 446 LKLCKEM 452



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 44/157 (28%), Positives = 76/157 (48%)
 Frame = +3

Query: 9   EMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYNTL 188
           EM  ++ +EM   G+   +++YN LI G C +G    A  L   +++  + PN  T++ L
Sbjct: 303 EMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSAL 362

Query: 189 MNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLAGI 368
           +   C       A +L+  M R    P   T+  LI+ + +    +  + ++ EMS   I
Sbjct: 363 ITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSI 422

Query: 369 KADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVP 479
             D  T + +  GL   GK + A  + KE++MK L+P
Sbjct: 423 APDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMP 459



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 38/183 (20%), Positives = 75/183 (40%)
 Frame = +3

Query: 72  YNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYNTLMNVLCKEGKLHEANKLFSEMK 251
           ++ L   Y     L +A+ +   M+  G  P   + N  ++      +   A   + EM+
Sbjct: 114 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQ 173

Query: 252 RMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLAGIKADILTYNAVIMGLCKEGKTK 431
           R  ++P   T N ++  + + G  E  + + ++M   G    I +YN +I G C +G   
Sbjct: 174 RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLN 233

Query: 432 KAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRAFQLYKSMVKSGCHPNEALFKMLI 611
               +   ++   + P+  TF  LI G         A +++  M  +   PN   +  LI
Sbjct: 234 SGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLI 293

Query: 612 SAF 620
           + +
Sbjct: 294 NGY 296



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 30/119 (25%), Positives = 58/119 (48%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           + + A  +  E++ + L  +  +++ LI G C +     A +L   M +SG  PN  T+ 
Sbjct: 336 RTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFK 395

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSL 359
            L++  CK      A ++  EM    +AP + T + L  G   +G  E+ +++ +EM +
Sbjct: 396 MLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEM 454


>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  311 bits (797), Expect = 7e-83
 Identities = 152/221 (68%), Positives = 183/221 (82%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KLE A+++F  ME  G S ++ SYN LIAGYCNKGLL+S MKLK +MEK+GVRP+DVT+N
Sbjct: 329 KLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFN 388

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
           TL+N  C+ GKLHEANK+FSEMK  +V P TITYNTLINGYS+ G SEM  R+ +EM   
Sbjct: 389 TLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRN 448

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           GIKADILTYNA+I+GLC EG+TKKAA++VKELD + LVPNSSTF+ALITGQ VR N+ RA
Sbjct: 449 GIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERA 508

Query: 543 FQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
           FQLYKSM++SGCHPN   FKMLIS F KNED+DGA +V++E
Sbjct: 509 FQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVRE 549



 Score =  109 bits (273), Expect = 4e-22
 Identities = 67/221 (30%), Positives = 109/221 (49%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KL  A+ +F +M++ G    V S N  I+   +      A+     M++  + PN  T N
Sbjct: 259 KLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLN 318

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
            +M   CK GKL +A ++F  M+ M  +PT  +YNTLI GY   G     M++   M   
Sbjct: 319 MVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKN 378

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           G++ D +T+N +I G C+ GK  +A  +  E+    +VPN+ T+  LI G S   N+   
Sbjct: 379 GVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMG 438

Query: 543 FQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
            +L+  M+++G   +   +  LI           AA ++KE
Sbjct: 439 GRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKE 479



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 53/187 (28%), Positives = 93/187 (49%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KL  A ++F+EM+   +  + ++YN LI GY   G      +L + M ++G++ + +TYN
Sbjct: 399 KLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYN 458

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
            L+  LC EG+  +A  L  E+ R  + P + T++ LI G      SE   ++ + M  +
Sbjct: 459 ALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRS 518

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           G   +  T+  +I   CK      A  +V+E+  + + P+S T + L  G  +      A
Sbjct: 519 GCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELA 578

Query: 543 FQLYKSM 563
            +L K M
Sbjct: 579 LKLCKEM 585



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 44/157 (28%), Positives = 76/157 (48%)
 Frame = +3

Query: 9   EMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYNTL 188
           EM  ++ +EM   G+   +++YN LI G C +G    A  L   +++  + PN  T++ L
Sbjct: 436 EMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSAL 495

Query: 189 MNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLAGI 368
           +   C       A +L+  M R    P   T+  LI+ + +    +  + ++ EMS   I
Sbjct: 496 ITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSI 555

Query: 369 KADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVP 479
             D  T + +  GL   GK + A  + KE++MK L+P
Sbjct: 556 APDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMP 592



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 38/183 (20%), Positives = 74/183 (40%)
 Frame = +3

Query: 72  YNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYNTLMNVLCKEGKLHEANKLFSEMK 251
           ++ L   Y     L +A+ +   M+  G  P   + N  ++      +   A   + EM+
Sbjct: 247 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQ 306

Query: 252 RMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLAGIKADILTYNAVIMGLCKEGKTK 431
           R  ++P   T N ++  + + G  E  + + + M   G    I +YN +I G C +G   
Sbjct: 307 RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLN 366

Query: 432 KAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRAFQLYKSMVKSGCHPNEALFKMLI 611
               +   ++   + P+  TF  LI G         A +++  M  +   PN   +  LI
Sbjct: 367 SGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLI 426

Query: 612 SAF 620
           + +
Sbjct: 427 NGY 429



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 30/119 (25%), Positives = 58/119 (48%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           + + A  +  E++ + L  +  +++ LI G C +     A +L   M +SG  PN  T+ 
Sbjct: 469 RTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFK 528

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSL 359
            L++  CK      A ++  EM    +AP + T + L  G   +G  E+ +++ +EM +
Sbjct: 529 MLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEM 587


>ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530270|gb|EEF32170.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score =  303 bits (775), Expect = 3e-80
 Identities = 151/221 (68%), Positives = 180/221 (81%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KLE AVQ+F EME  G+S +  SYN LI GYC KGLL+SA+KLKN M   GV  N VT+N
Sbjct: 231 KLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFN 290

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
           +L++  CKEGKLHEA+K+FSEMK + VAP TITYNTLING+S+ G SEM  R+ EEMS  
Sbjct: 291 SLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRN 350

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           G+KADILTYNA+I+GLCKEGKTKKAA+MVKELD + LVPN+STF+ALI+GQ +RNN+ RA
Sbjct: 351 GVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRA 410

Query: 543 FQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
           FQLYKSMV+ GCHPNE  F ML+SAF KNED++GA  VL E
Sbjct: 411 FQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLME 451



 Score =  122 bits (305), Expect = 8e-26
 Identities = 66/221 (29%), Positives = 113/221 (51%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           K   A   F +M+  G   +V S N  ++   +   +  A+     M +  + PN  T N
Sbjct: 161 KFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRN 220

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
            +M   CK GKL +A ++F EM+ + ++P   +YNTLI GY   G     +++   M   
Sbjct: 221 MVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAK 280

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           G++A+++T+N++I G CKEGK  +A+ +  E+ +  + PN+ T+  LI G S   N+   
Sbjct: 281 GVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMG 340

Query: 543 FQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
            +LY+ M ++G   +   +  LI    K      AA ++KE
Sbjct: 341 RRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKE 381



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 45/170 (26%), Positives = 85/170 (50%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KL  A ++F+EM+   ++ + ++YN LI G+   G      +L   M ++GV+ + +TYN
Sbjct: 301 KLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYN 360

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
            L+  LCKEGK  +A  +  E+ +  + P   T++ LI+G      S+   ++ + M   
Sbjct: 361 ALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRI 420

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITG 512
           G   +  T+N ++   CK    + A  ++ E+  +   P S   + +  G
Sbjct: 421 GCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHG 470



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 19/237 (8%)
 Frame = +3

Query: 12  MAVQMFNEME-EKGLSHSVVSYNILIAGYC-NKGLLSSAMKLKNVMEKSGVRPNDV---- 173
           ++++ FN ++ E   SH++ ++++++     N+   S+ + LK+V+ K  +   D     
Sbjct: 75  LSLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEA 134

Query: 174 -------------TYNTLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSET 314
                         +++L   L    K   A   F +MK     PT  + N  ++   + 
Sbjct: 135 ILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDL 194

Query: 315 GYSEMVMRMLEEMSLAGIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTF 494
              ++ +   +EM    I  ++ T N V+   CK GK +KA  + +E++   + PN +++
Sbjct: 195 HRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSY 254

Query: 495 AALITGQSVRNNAGRAFQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
             LI G   +     A +L  SM   G   N   F  LI  F K      A++V  E
Sbjct: 255 NTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSE 311


>ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|222861287|gb|EEE98829.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  300 bits (768), Expect = 2e-79
 Identities = 146/221 (66%), Positives = 179/221 (80%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KLE AV++  EME  G++ +VVSYN LIAG+CNKGLLS A KLKN+M K+G+ PN VT+N
Sbjct: 214 KLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFN 273

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
           +L++  CKEGKLHEAN+ FSEMK M V P T+TYNTLINGY + G S M  ++ EEM   
Sbjct: 274 SLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRN 333

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           G+KADILTYNA+I+GLCKEGKTKKAA +VKELD + LVPN+ST++ALI+GQ  R N+ RA
Sbjct: 334 GVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRA 393

Query: 543 FQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
           FQLYKSMV+SGCHPNE  FKML SAF+KNED++GA  VL +
Sbjct: 394 FQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMD 434



 Score =  120 bits (300), Expect = 3e-25
 Identities = 62/221 (28%), Positives = 115/221 (52%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           K   A  +F+ M++ G   +V S N  ++   +   +  A+     M +  + PN  T+N
Sbjct: 144 KFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFN 203

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
            +++ LCK GKL +A ++  EM+ + + P  ++YNTLI G+   G   +  ++   M   
Sbjct: 204 LVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKN 263

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           G++ +++T+N++I G CKEGK  +A     E+ +  + PN+ T+  LI G     N+  A
Sbjct: 264 GLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMA 323

Query: 543 FQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
            ++Y+ M+++G   +   +  LI    K      AA ++KE
Sbjct: 324 GKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKE 364



 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 53/197 (26%), Positives = 94/197 (47%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KL  A + F+EM+   ++ + V+YN LI GY   G  + A K+   M ++GV+ + +TYN
Sbjct: 284 KLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYN 343

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
            L+  LCKEGK  +A  L  E+ +  + P   TY+ LI+G      S+   ++ + M  +
Sbjct: 344 ALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRS 403

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           G   +  T+  +     K    + A +++ ++  + +  +S+T   +  G         A
Sbjct: 404 GCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLA 463

Query: 543 FQLYKSMVKSGCHPNEA 593
            +L        CH  EA
Sbjct: 464 MKL--------CHEMEA 472



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 42/156 (26%), Positives = 74/156 (47%)
 Frame = +3

Query: 12  MAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYNTLM 191
           MA +++ EM   G+   +++YN LI G C +G    A  L   ++K  + PN  TY+ L+
Sbjct: 322 MAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALI 381

Query: 192 NVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLAGIK 371
           +  C       A +L+  M R    P   T+  L + + +    E    +L +M    + 
Sbjct: 382 SGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMA 441

Query: 372 ADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVP 479
           +D  T   +  GLC+ GK   A  +  E++ ++L+P
Sbjct: 442 SDSNTLLEIYDGLCQCGKENLAMKLCHEMEARRLIP 477


>ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334186944|ref|NP_001190849.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g26680, mitochondrial; Flags: Precursor
           gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis
           thaliana] gi|7269520|emb|CAB79523.1| putative protein
           [Arabidopsis thaliana] gi|332659836|gb|AEE85236.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332659837|gb|AEE85237.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 521

 Score =  283 bits (723), Expect = 3e-74
 Identities = 137/221 (61%), Positives = 172/221 (77%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KL+  +++  +ME  G   + VSYN LIAG+C KGLLSSA+KLKN+M KSG++PN VT+N
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFN 312

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
           TL++  C+  KL EA+K+F EMK + VAP T+TYNTLINGYS+ G  EM  R  E+M   
Sbjct: 313 TLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN 372

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           GI+ DILTYNA+I GLCK+ KT+KAA  VKELD + LVPNSSTF+ALI GQ VR NA R 
Sbjct: 373 GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432

Query: 543 FQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
           F+LYKSM++SGCHPNE  F ML+SAF +NED+DGA+QVL+E
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLRE 473



 Score =  117 bits (292), Expect = 3e-24
 Identities = 63/221 (28%), Positives = 114/221 (51%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           K   A   F +M++ G   +V S N  ++    +G +  A++    M +  + PN  T N
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLN 242

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
            +M+  C+ GKL +  +L  +M+R+    T ++YNTLI G+ E G     +++   M  +
Sbjct: 243 MVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITGQSVRNNAGRA 542
           G++ +++T+N +I G C+  K ++A+ +  E+    + PN+ T+  LI G S + +   A
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362

Query: 543 FQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
           F+ Y+ MV +G   +   +  LI    K      AAQ +KE
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 42/170 (24%), Positives = 86/170 (50%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           KL+ A ++F EM+   ++ + V+YN LI GY  +G    A +    M  +G++ + +TYN
Sbjct: 323 KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLA 362
            L+  LCK+ K  +A +   E+ +  + P + T++ LI G      ++    + + M  +
Sbjct: 383 ALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRS 442

Query: 363 GIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTFAALITG 512
           G   +  T+N ++   C+      A+ +++E+  + +  +S T   +  G
Sbjct: 443 GCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492



 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 40/159 (25%), Positives = 73/159 (45%)
 Frame = +3

Query: 9   EMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYNTL 188
           EMA + + +M   G+   +++YN LI G C +     A +    ++K  + PN  T++ L
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419

Query: 189 MNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEMSLAGI 368
           +   C         +L+  M R    P   T+N L++ +      +   ++L EM    I
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479

Query: 369 KADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNS 485
             D  T + V  GL  +GK +    +++E++ KK +  S
Sbjct: 480 PLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 19/237 (8%)
 Frame = +3

Query: 12  MAVQMFNEMEEKGL-SHSVVSYNILIAGYC-NKGLLSSAMKLKNVMEKSGV--------- 158
           ++++ FN  + +   SHS+ ++ I++     N+   S+   L++V+   GV         
Sbjct: 97  LSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDA 156

Query: 159 -----RPNDVT---YNTLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSET 314
                R  D T   +++L        K   A   F +MK     PT  + N  ++     
Sbjct: 157 LLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ 216

Query: 315 GYSEMVMRMLEEMSLAGIKADILTYNAVIMGLCKEGKTKKAAHMVKELDMKKLVPNSSTF 494
           G  ++ +R   EM    I  +  T N V+ G C+ GK  K   ++++++         ++
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276

Query: 495 AALITGQSVRNNAGRAFQLYKSMVKSGCHPNEALFKMLISAFIKNEDYDGAAQVLKE 665
             LI G   +     A +L   M KSG  PN   F  LI  F +      A++V  E
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/117 (26%), Positives = 59/117 (50%)
 Frame = +3

Query: 3   KLEMAVQMFNEMEEKGLSHSVVSYNILIAGYCNKGLLSSAMKLKNVMEKSGVRPNDVTYN 182
           K   A Q   E++++ L  +  +++ LI G C +       +L   M +SG  PN+ T+N
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFN 452

Query: 183 TLMNVLCKEGKLHEANKLFSEMKRMEVAPTTITYNTLINGYSETGYSEMVMRMLEEM 353
            L++  C+      A+++  EM R  +   + T + + NG    G  ++V ++L+EM
Sbjct: 453 MLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509