BLASTX nr result

ID: Scutellaria23_contig00014643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00014643
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877592.1| hypoxia-responsive family protein [Arabidops...   129   8e-28
ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago trunc...   129   1e-27
dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]           128   2e-27
gb|AAP40393.1| unknown protein [Arabidopsis thaliana] gi|3079408...   126   5e-27
ref|NP_190386.1| RING-H2 finger protein ATL48 [Arabidopsis thali...   126   5e-27

>ref|XP_002877592.1| hypoxia-responsive family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297323430|gb|EFH53851.1| hypoxia-responsive
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score =  129 bits (324), Expect = 8e-28
 Identities = 64/77 (83%), Positives = 70/77 (90%)
 Frame = +1

Query: 70  MGAVNSELEDLFEGKKRVRNPFVPIGAFMTAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 249
           M AV  ++EDLF+ KKRVRNP VP+GA MTAGVLTAGLISFR+GNSQLGQ LMRARVVVQ
Sbjct: 1   MSAVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 250 GATVALMVGTAYYYGEN 300
           GATVALMVGTAYYYG+N
Sbjct: 61  GATVALMVGTAYYYGDN 77


>ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago truncatula]
           gi|355510002|gb|AES91144.1| RING-H2 finger protein ATL3I
           [Medicago truncatula] gi|388512809|gb|AFK44466.1|
           unknown [Medicago truncatula]
          Length = 82

 Score =  129 bits (323), Expect = 1e-27
 Identities = 65/77 (84%), Positives = 68/77 (88%)
 Frame = +1

Query: 70  MGAVNSELEDLFEGKKRVRNPFVPIGAFMTAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 249
           MG+     ED  E KKRVRNPFVPIGA +TAGVLTAGLISFRQGNSQLGQKLMRARVVVQ
Sbjct: 1   MGSPEPGFEDFLEEKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 60

Query: 250 GATVALMVGTAYYYGEN 300
           GATVALMVGTAYYYG+N
Sbjct: 61  GATVALMVGTAYYYGDN 77


>dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]
          Length = 95

 Score =  128 bits (321), Expect = 2e-27
 Identities = 62/81 (76%), Positives = 71/81 (87%)
 Frame = +1

Query: 58  IFSEMGAVNSELEDLFEGKKRVRNPFVPIGAFMTAGVLTAGLISFRQGNSQLGQKLMRAR 237
           +  +M +V  ++EDLF+ KKRVRNP VP+GA MTAGVLTAGLISFR+GNSQLGQ LMRAR
Sbjct: 11  VLEKMSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRAR 70

Query: 238 VVVQGATVALMVGTAYYYGEN 300
           VVVQGATVALMVGT YYYG+N
Sbjct: 71  VVVQGATVALMVGTGYYYGDN 91


>gb|AAP40393.1| unknown protein [Arabidopsis thaliana] gi|30794087|gb|AAP40486.1|
           unknown protein [Arabidopsis thaliana]
          Length = 81

 Score =  126 bits (317), Expect = 5e-27
 Identities = 62/77 (80%), Positives = 69/77 (89%)
 Frame = +1

Query: 70  MGAVNSELEDLFEGKKRVRNPFVPIGAFMTAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 249
           M +V  ++EDLF+ KKRVRNP VP+GA MTAGVLTAGLISFR+GNSQLGQ LMRARVVVQ
Sbjct: 1   MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 250 GATVALMVGTAYYYGEN 300
           GATVALMVGT YYYG+N
Sbjct: 61  GATVALMVGTGYYYGDN 77


>ref|NP_190386.1| RING-H2 finger protein ATL48 [Arabidopsis thaliana]
           gi|68565188|sp|Q7X843.2|ATL48_ARATH RecName:
           Full=RING-H2 finger protein ATL48; AltName:
           Full=YGHL1-C3HC4 RING fusion protein
           gi|4678325|emb|CAB41136.1| putative protein [Arabidopsis
           thaliana] gi|30038524|dbj|BAC75820.1| YGHL1-C3HC4 RING
           fusion protein [Arabidopsis thaliana]
           gi|332644837|gb|AEE78358.1| RING-H2 finger protein ATL48
           [Arabidopsis thaliana]
          Length = 349

 Score =  126 bits (317), Expect = 5e-27
 Identities = 62/77 (80%), Positives = 69/77 (89%)
 Frame = +1

Query: 70  MGAVNSELEDLFEGKKRVRNPFVPIGAFMTAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 249
           M +V  ++EDLF+ KKRVRNP VP+GA MTAGVLTAGLISFR+GNSQLGQ LMRARVVVQ
Sbjct: 1   MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 250 GATVALMVGTAYYYGEN 300
           GATVALMVGT YYYG+N
Sbjct: 61  GATVALMVGTGYYYGDN 77


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