BLASTX nr result

ID: Scutellaria23_contig00014410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00014410
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|40909...    82   9e-14
gb|AEA86331.1| E3 ubiquitin-protein ligase COP1 [Solanum nigrum]       82   9e-14
dbj|BAK06015.1| predicted protein [Hordeum vulgare subsp. vulgare]     82   1e-13
ref|XP_003570547.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...    81   2e-13
ref|XP_004164350.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...    80   4e-13

>ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|4090943|gb|AAC98912.1| COP1
           homolog [Solanum lycopersicum]
          Length = 677

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 34/50 (68%), Positives = 38/50 (76%)
 Frame = +1

Query: 64  TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKAGKVQNRR 213
           TACGHSFCY CIVTHL + SDCPCCSH+L    +YPNFLLDK  K  + R
Sbjct: 64  TACGHSFCYMCIVTHLHNKSDCPCCSHYLTTSQLYPNFLLDKLLKKTSAR 113


>gb|AEA86331.1| E3 ubiquitin-protein ligase COP1 [Solanum nigrum]
          Length = 173

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 34/50 (68%), Positives = 38/50 (76%)
 Frame = +1

Query: 64  TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKAGKVQNRR 213
           TACGHSFCY CIVTHL + SDCPCCSH+L    +YPNFLLDK  K  + R
Sbjct: 26  TACGHSFCYMCIVTHLHNKSDCPCCSHYLTTSQLYPNFLLDKLLKKTSAR 75


>dbj|BAK06015.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 693

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = +1

Query: 64  TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKAGKVQNRRFRDEGCPYPT 243
           TACGHSFCY CIVTHL H SDCPCC+++L    +YPNFLLDK  K  + R +      P 
Sbjct: 83  TACGHSFCYMCIVTHLNHKSDCPCCANYLTKAQLYPNFLLDKVVKKMSAR-QVAKTASPI 141

Query: 244 NLLRNVPSEGS 276
           +  R+V  +G+
Sbjct: 142 DQFRHVVQQGN 152


>ref|XP_003570547.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Brachypodium
           distachyon]
          Length = 670

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 37/71 (52%), Positives = 46/71 (64%)
 Frame = +1

Query: 64  TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKAGKVQNRRFRDEGCPYPT 243
           TACGHSFCY CIVTHL H SDCPCC ++L    +YPNFLLDK  K  + R +      P 
Sbjct: 89  TACGHSFCYMCIVTHLGHKSDCPCCGNYLTKAQLYPNFLLDKVVKKMSAR-QIAKTASPV 147

Query: 244 NLLRNVPSEGS 276
           +  R+V  +G+
Sbjct: 148 DQFRHVVQQGN 158


>ref|XP_004164350.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
          Length = 670

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
 Frame = +1

Query: 64  TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDK-AGKVQNRRFRDEGCPY 237
           T CGHSFCY CIVTHLR+ SDCPCC+HFL ++ I+PN LLDK   K   R+ +    P+
Sbjct: 59  TTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPF 117


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