BLASTX nr result
ID: Scutellaria23_contig00014410
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Scutellaria23_contig00014410 (669 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|40909... 82 9e-14 gb|AEA86331.1| E3 ubiquitin-protein ligase COP1 [Solanum nigrum] 82 9e-14 dbj|BAK06015.1| predicted protein [Hordeum vulgare subsp. vulgare] 82 1e-13 ref|XP_003570547.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 81 2e-13 ref|XP_004164350.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 80 4e-13 >ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|4090943|gb|AAC98912.1| COP1 homolog [Solanum lycopersicum] Length = 677 Score = 82.0 bits (201), Expect = 9e-14 Identities = 34/50 (68%), Positives = 38/50 (76%) Frame = +1 Query: 64 TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKAGKVQNRR 213 TACGHSFCY CIVTHL + SDCPCCSH+L +YPNFLLDK K + R Sbjct: 64 TACGHSFCYMCIVTHLHNKSDCPCCSHYLTTSQLYPNFLLDKLLKKTSAR 113 >gb|AEA86331.1| E3 ubiquitin-protein ligase COP1 [Solanum nigrum] Length = 173 Score = 82.0 bits (201), Expect = 9e-14 Identities = 34/50 (68%), Positives = 38/50 (76%) Frame = +1 Query: 64 TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKAGKVQNRR 213 TACGHSFCY CIVTHL + SDCPCCSH+L +YPNFLLDK K + R Sbjct: 26 TACGHSFCYMCIVTHLHNKSDCPCCSHYLTTSQLYPNFLLDKLLKKTSAR 75 >dbj|BAK06015.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 693 Score = 81.6 bits (200), Expect = 1e-13 Identities = 37/71 (52%), Positives = 47/71 (66%) Frame = +1 Query: 64 TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKAGKVQNRRFRDEGCPYPT 243 TACGHSFCY CIVTHL H SDCPCC+++L +YPNFLLDK K + R + P Sbjct: 83 TACGHSFCYMCIVTHLNHKSDCPCCANYLTKAQLYPNFLLDKVVKKMSAR-QVAKTASPI 141 Query: 244 NLLRNVPSEGS 276 + R+V +G+ Sbjct: 142 DQFRHVVQQGN 152 >ref|XP_003570547.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Brachypodium distachyon] Length = 670 Score = 80.9 bits (198), Expect = 2e-13 Identities = 37/71 (52%), Positives = 46/71 (64%) Frame = +1 Query: 64 TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKAGKVQNRRFRDEGCPYPT 243 TACGHSFCY CIVTHL H SDCPCC ++L +YPNFLLDK K + R + P Sbjct: 89 TACGHSFCYMCIVTHLGHKSDCPCCGNYLTKAQLYPNFLLDKVVKKMSAR-QIAKTASPV 147 Query: 244 NLLRNVPSEGS 276 + R+V +G+ Sbjct: 148 DQFRHVVQQGN 158 >ref|XP_004164350.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus] Length = 670 Score = 80.1 bits (196), Expect = 4e-13 Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 1/59 (1%) Frame = +1 Query: 64 TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDK-AGKVQNRRFRDEGCPY 237 T CGHSFCY CIVTHLR+ SDCPCC+HFL ++ I+PN LLDK K R+ + P+ Sbjct: 59 TTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPF 117