BLASTX nr result

ID: Scutellaria23_contig00014402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00014402
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]               338   1e-90
ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|2...   308   1e-81
ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotei...   307   3e-81
ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycin...   292   8e-77
ref|XP_002517742.1| small nuclear ribonucleoprotein U)1a,U)2b, p...   291   2e-76

>gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]
          Length = 231

 Score =  338 bits (868), Expect = 1e-90
 Identities = 173/231 (74%), Positives = 184/231 (79%)
 Frame = +3

Query: 102 MLTSDIPPNQTIYXXXXXXXXXXXXLKRSLYALFSQYGRIVDVVALKTAKLRGQAWIVFS 281
           MLT DIPPNQTIY            LKRSLY LFSQYGRIVD+VALKT KLRGQ+W+VFS
Sbjct: 2   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRIVDIVALKTPKLRGQSWVVFS 61

Query: 282 EVTAASNAVRQMQNFPFYDKPLRIQYAKSKSDCIAKAEGTYDXXXXXXXXXXXXXXXXXG 461
           EVTAASNAVRQMQNFPFYDKP+RIQYAKSKSDCIAKAEGTYD                  
Sbjct: 62  EVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDCIAKAEGTYDKKKKQDEKVEKRKRTEET 121

Query: 462 QQNAGANGPRADTNGGPATAPRQGKPTTQEAAAEPNNILFIQNLPYETNSMMLELLFKQY 641
            Q   ANGPR D+NGGPA A RQGKP+ Q+  AEPNNILFIQNLP+ET SMMLE+LFKQY
Sbjct: 122 PQTGAANGPRTDSNGGPAAASRQGKPSAQD-VAEPNNILFIQNLPHETTSMMLEVLFKQY 180

Query: 642 PGFREVRMVEAKPGIAFVEFEDDSQSSVAMQDLQGFKITAQNPMAITYAKK 794
           PGFREVRM+EAKPGIAFVEF+DD QSSVAMQ LQGFKIT QNPMAITYAKK
Sbjct: 181 PGFREVRMIEAKPGIAFVEFDDDVQSSVAMQALQGFKITPQNPMAITYAKK 231


>ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|222862970|gb|EEF00477.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  308 bits (790), Expect = 1e-81
 Identities = 164/235 (69%), Positives = 181/235 (77%), Gaps = 4/235 (1%)
 Frame = +3

Query: 102 MLTSDIPPNQTIYXXXXXXXXXXXXLKRSLYALFSQYGRIVDVVALKTAKLRGQAWIVFS 281
           MLT DIPPNQTIY            LKRSLY LFSQYGRI+DVVALKTA+LRGQAW+VFS
Sbjct: 1   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTARLRGQAWVVFS 60

Query: 282 EVTAASNAVRQMQNFPFYDKPLRIQYAKSKSDCIAKAEGTYD----XXXXXXXXXXXXXX 449
           EVTAASNAVRQMQ FPFYDKP+RIQYAK+KSDCIA+AEG YD                  
Sbjct: 61  EVTAASNAVRQMQGFPFYDKPMRIQYAKTKSDCIAEAEGVYDPNAKKKKKQEEKAERKKR 120

Query: 450 XXXGQQNAGANGPRADTNGGPATAPRQGKPTTQEAAAEPNNILFIQNLPYETNSMMLELL 629
               QQ+A ANG  A++NGGP T+ RQG  + QE    PNNILFIQNLP+ET SMML++L
Sbjct: 121 AEEAQQSAPANGKPAESNGGP-TSFRQGNQSAQE-TVPPNNILFIQNLPHETTSMMLQVL 178

Query: 630 FKQYPGFREVRMVEAKPGIAFVEFEDDSQSSVAMQDLQGFKITAQNPMAITYAKK 794
           F+QYPGFREVRM+EAKPGIAFVEFEDD QSS+AMQ LQGFKIT QNPMAITYAKK
Sbjct: 179 FQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKITPQNPMAITYAKK 233


>ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
           gi|297745807|emb|CBI15863.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  307 bits (786), Expect = 3e-81
 Identities = 156/234 (66%), Positives = 178/234 (76%), Gaps = 3/234 (1%)
 Frame = +3

Query: 102 MLTSDIPPNQTIYXXXXXXXXXXXXLKRSLYALFSQYGRIVDVVALKTAKLRGQAWIVFS 281
           ML+ DIPPNQ+IY            LKRSLY LFSQYGRI+DVVALKT KLRGQAW+VFS
Sbjct: 1   MLSGDIPPNQSIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVVFS 60

Query: 282 EVTAASNAVRQMQNFPFYDKPLRIQYAKSKSDCIAKAEGTY---DXXXXXXXXXXXXXXX 452
           EVTAASNAVRQMQNFPFYDKP+R+QYAK+KSDC+AKA+GT+   +               
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRVQYAKTKSDCVAKADGTFVPREKKKKQEEKAEKKRRA 120

Query: 453 XXGQQNAGANGPRADTNGGPATAPRQGKPTTQEAAAEPNNILFIQNLPYETNSMMLELLF 632
              QQ+  ANG  A+TNGGP    RQG    +E  A PNNILFIQNLP++T SMML++LF
Sbjct: 121 EEAQQSGNANGRNAETNGGPTPPFRQGNQGAREPEAAPNNILFIQNLPHQTTSMMLQVLF 180

Query: 633 KQYPGFREVRMVEAKPGIAFVEFEDDSQSSVAMQDLQGFKITAQNPMAITYAKK 794
           +QYPGFREVRM+EAKPGIAFVEFEDD QSS+AM+ LQGFKIT QNPMAI YAKK
Sbjct: 181 QQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMEALQGFKITPQNPMAIAYAKK 234


>ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
           gi|255647802|gb|ACU24361.1| unknown [Glycine max]
          Length = 232

 Score =  292 bits (748), Expect = 8e-77
 Identities = 153/234 (65%), Positives = 175/234 (74%), Gaps = 3/234 (1%)
 Frame = +3

Query: 102 MLTSDIPPNQTIYXXXXXXXXXXXXLKRSLYALFSQYGRIVDVVALKTAKLRGQAWIVFS 281
           ML+ DIPPNQTIY            LKRSLY LFSQYGRI+DV+ALKT KLRGQAW+ FS
Sbjct: 1   MLSGDIPPNQTIYIKNINEKVKKDELKRSLYCLFSQYGRILDVIALKTPKLRGQAWVCFS 60

Query: 282 EVTAASNAVRQMQNFPFYDKPLRIQYAKSKSDCIAKAEGTY---DXXXXXXXXXXXXXXX 452
           EVTAASNAVRQMQNFPFYDKP+RIQYAK+KSDCIAK EGTY   +               
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAKEEGTYVPREKKKKQEEKAERKRRA 120

Query: 453 XXGQQNAGANGPRADTNGGPATAPRQGKPTTQEAAAEPNNILFIQNLPYETNSMMLELLF 632
              QQ+  ANG  + +NGGP  + RQG P  QE AA PNNILFI+NLP+ET   MLE+LF
Sbjct: 121 EEAQQSGVANGTHSASNGGPTASFRQG-PGAQETAA-PNNILFIENLPHETTGRMLEMLF 178

Query: 633 KQYPGFREVRMVEAKPGIAFVEFEDDSQSSVAMQDLQGFKITAQNPMAITYAKK 794
           +QYPGF+EVR++EAKPGIAFV+FED+ QSS+AMQ L GFKIT QNPM IT+AKK
Sbjct: 179 EQYPGFKEVRLIEAKPGIAFVDFEDEVQSSMAMQALHGFKITPQNPMIITFAKK 232


>ref|XP_002517742.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
           communis] gi|223543140|gb|EEF44674.1| small nuclear
           ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
          Length = 233

 Score =  291 bits (745), Expect = 2e-76
 Identities = 160/236 (67%), Positives = 173/236 (73%), Gaps = 5/236 (2%)
 Frame = +3

Query: 102 MLTSDIPPNQTIYXXXXXXXXXXXXLKRSLYALFSQYGRIVDVVALKTAKLRGQAWIVFS 281
           MLT DIPPNQTIY            LKRSLY LFSQYGRI+DVVALKT KLRGQAW+ FS
Sbjct: 1   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVCFS 60

Query: 282 EVTAASNAVRQMQNFPFYDKPLRIQYAKSKSDCIAKAEGTYD----XXXXXXXXXXXXXX 449
           EV AASNAVRQMQ FPFYDKP+RIQYAK+KSDC+ +AEG YD                  
Sbjct: 61  EVMAASNAVRQMQGFPFYDKPMRIQYAKTKSDCLVEAEGNYDPNAKKKKKQEEKAERKRR 120

Query: 450 XXXGQQNAGANGPRADTNGGPATAP-RQGKPTTQEAAAEPNNILFIQNLPYETNSMMLEL 626
               QQ+A ANG     N G  TAP RQG    QE AA PNNILFIQNLP+ET SMML++
Sbjct: 121 AEEAQQSATANGTSTVNNRG--TAPFRQGNRGEQE-AAPPNNILFIQNLPHETTSMMLQV 177

Query: 627 LFKQYPGFREVRMVEAKPGIAFVEFEDDSQSSVAMQDLQGFKITAQNPMAITYAKK 794
           LF+QYPGFREVRM+EAKPGIAFVEFEDD QSS+AMQ LQ FKIT QNPMAITYAKK
Sbjct: 178 LFQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQSFKITPQNPMAITYAKK 233


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