BLASTX nr result

ID: Scutellaria23_contig00014268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00014268
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP50228.1| resistance candidate RPP8-like protein [Arabidops...    74   1e-11
ref|XP_002872017.1| predicted protein [Arabidopsis lyrata subsp....    64   2e-08
ref|XP_002336919.1| cc-nbs-lrr resistance protein [Populus trich...    62   6e-08
ref|XP_002863912.1| viral resistance protein [Arabidopsis lyrata...    60   1e-07
gb|AAC83165.1| disease resistance protein RPP8 [Arabidopsis thal...    60   2e-07

>gb|AAP50228.1| resistance candidate RPP8-like protein [Arabidopsis arenosa]
          Length = 504

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 59/159 (37%), Positives = 88/159 (55%), Gaps = 6/159 (3%)
 Frame = +3

Query: 21  MIDEDKCRHVRSLKFTSSAVSMIRIEVVLMTIPDIQIFKFVRSLTFFKFDFGGRKLPKGI 200
           M+  +  + VRSL F  +     + + V+ ++ D  I  F+R L   +  F G KLP  I
Sbjct: 220 MMGHENFKKVRSLLFFKA-----KEDDVIQSVSDFGILPFLRVLDLSRAKFQGGKLPSSI 274

Query: 201 GTLILLRSLRLFQCVG-LNKLPSSISNLAYLEILSLN-GSLNIRVPNVLKKLSRLKHLIL 374
           G LI LR L L++ V  ++ LPSS+ NL  L  L+L    +++ VPNVLK+L  L++LIL
Sbjct: 275 GELIHLRFLSLYRAVHVVSHLPSSLRNLKLLLYLNLGVDGVSVHVPNVLKELRELRYLIL 334

Query: 375 PRYNEELIGNYHLRLDEG-LDQLEILLGF---NSSVHEL 479
           P      + +   +L+ G L  LE L G+   NSSV +L
Sbjct: 335 P-----FLMDVKTKLELGDLVNLETLRGYSIENSSVKDL 368


>ref|XP_002872017.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317854|gb|EFH48276.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 926

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
 Frame = +3

Query: 141 VRSLTFFKFDFGGRKLPKGIGTLILLRSLRLFQCVGLNKLPSSISNLAYLEILSLN-GSL 317
           +R L  F   F  RKLPK IG LI LR L L +   L+ LPSS+ NL  L  L L     
Sbjct: 592 LRVLDLFGAQFRRRKLPKSIGKLIHLRYLSLKE-TNLSVLPSSLGNLELLVYLDLEIYET 650

Query: 318 NIRVPNVLKKLSRLKHLILPRYNEELIGNYHLRLDEGLDQLEILLGFN 461
            + +PNVLKK+ +L++L+LP   +EL     L L  GL +LE L  F+
Sbjct: 651 MVHIPNVLKKMKKLRYLMLP---DELSNKTKLEL-SGLVKLETLKNFS 694


>ref|XP_002336919.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222837129|gb|EEE75508.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 605

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
 Frame = +3

Query: 132 FKFVRSLTFFKFDFGGRKLPKGIGTLILLRSLRLFQCVGLNKLPSSISNLAYLEILSL-N 308
           FK +R L        G KLPK IG LI LR L L +   +++LPS+I NL YL+ L L  
Sbjct: 453 FKLLRVLDLEGIQSHGGKLPKEIGKLIHLRFLSL-RDTDIDELPSTIGNLRYLQTLDLLT 511

Query: 309 GSLNIRVPNVLKKLSRLKHLILPRYNEELIGNYHLRLD-EGLDQLEILLGFNSSVHEL 479
            +  +++PNV+ +L RL+HL LP    E  G Y  + +   L  L+ L+ F +   E+
Sbjct: 512 WNSTVQIPNVVWRLHRLRHLYLP----ESCGEYSYKWELANLVNLQTLVNFPAEKCEI 565


>ref|XP_002863912.1| viral resistance protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309747|gb|EFH40171.1| viral resistance protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 907

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
 Frame = +3

Query: 45  HVRSLKFTSSAVSMIRIEVVLMTIPDIQIFKFVRSLTFFKFDFGGRKLPKGIGTLILLRS 224
           H  + K  S  V  +  +  + +    Q   F+R L   +  F G KLP  IG LI LR 
Sbjct: 546 HKNNKKVRSLIVLGLEEDFWIQSASVFQNLPFLRVLDLSEVKFKGGKLPSSIGGLIHLRF 605

Query: 225 LRLFQCVGLNKLPSSISNLAYLEILSLNGSLN--IRVPNVLKKLSRLKHLILP 377
           L L+   G++ LPSS+ NL  L  L L+ ++   + VPNVLK++  L++L+LP
Sbjct: 606 LSLYD-AGVSHLPSSMRNLKLLLYLDLSVAIGEPVHVPNVLKEMLELRNLVLP 657


>gb|AAC83165.1| disease resistance protein RPP8 [Arabidopsis thaliana]
          Length = 906

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 49/119 (41%), Positives = 67/119 (56%), Gaps = 6/119 (5%)
 Frame = +3

Query: 141 VRSLTFFKFDFGGRKLPKGIGTLILLRSLRLFQCVGLNKLPSSISNLAYLEILSL--NGS 314
           +R L  +   F G KLP  IG LI LR L LF   G++ LPS++ NL  L  L+L  N  
Sbjct: 576 LRVLDLYWVKFEGGKLPSSIGGLIHLRYLSLF-LAGVSHLPSTMRNLKLLLYLNLSVNNK 634

Query: 315 LNIRVPNVLKKLSRLKHLILPRYNEELIGNYHLRLDEG-LDQLEILLGF---NSSVHEL 479
             I VPNVLK++ +L++L LP   ++       +L+ G L  LE L GF   +SSV +L
Sbjct: 635 EPIHVPNVLKEMIQLRYLSLPLKKDD-----KTKLELGDLVNLEFLFGFSTQHSSVTDL 688


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