BLASTX nr result

ID: Scutellaria23_contig00014225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00014225
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   154   1e-35
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...   130   2e-28
ref|NP_192803.4| GTP binding protein [Arabidopsis thaliana] gi|3...   125   4e-27
ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp....   124   9e-27
ref|XP_003572110.1| PREDICTED: ribosome biogenesis GTPase A-like...   124   1e-26

>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
           gi|297744953|emb|CBI38545.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  154 bits (389), Expect = 1e-35
 Identities = 85/178 (47%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
 Frame = +1

Query: 1   TGAIKDTVVGEMKLAEYFLAILSLTDEYKKWRKFSSSETGVILTNE-----GISNSGKTQ 165
           TGAIKD +VGE +LA+YFL+IL+ +DEYKKW K S+ E  +   ++     G S     Q
Sbjct: 217 TGAIKDCLVGEKELAQYFLSILNRSDEYKKWEKLSAEENEISTIDQRVGCLGSSELDSRQ 276

Query: 166 KRQYPTDHTQVHTNKPA*QAFLLHCSELN*H**LST*DFIVNNVRGTLFDVVSSFSGSME 345
           KRQYPTDHTQ                           DF+V  VR  LF+ +SSF GS+E
Sbjct: 277 KRQYPTDHTQ---------------------------DFVVREVRRVLFETISSFPGSLE 309

Query: 346 NEDDLARLIQEEFEVLLKVFHLPSESKESRYHRVAIKLLNLYRTGRLGHYTLDPLPNN 519
            E DL+RLI+ +F  L + F + SES E   ++VA KLLNLYRTGRLGHYTLD +P N
Sbjct: 310 KEKDLSRLIETQFTALREAFRVASESGEDVENKVAAKLLNLYRTGRLGHYTLDSVPRN 367


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
           gi|223534309|gb|EEF36021.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 373

 Score =  130 bits (326), Expect = 2e-28
 Identities = 75/175 (42%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
 Frame = +1

Query: 1   TGAIKDTVVGEMKLAEYFLAILSLTDEYKKWRKFSSSETGVILTNEGISNSGKTQ----- 165
           TG  +D ++GE +LA+YFLAIL+L+DEYKKW K S+ E     T+         Q     
Sbjct: 224 TGTFRDGLIGERELAQYFLAILNLSDEYKKWAKLSAREKEKSFTDNKAECLRDKQLDTEG 283

Query: 166 KRQYPTDHTQVHTNKPA*QAFLLHCSELN*H**LST*DFIVNNVRGTLFDVVSSFSGSME 345
           K+++ TDHTQ                           DFIV+  R  LF+ VSSF G ++
Sbjct: 284 KKEHLTDHTQ---------------------------DFIVHCARRKLFETVSSFDGDVQ 316

Query: 346 NEDDLARLIQEEFEVLLKVFHLPSESKESRYHRVAIKLLNLYRTGRLGHYTLDPL 510
           NE DL +LI+ +   L + FHLP + ++    +VA KLLNLYRTGRLGHYTLDPL
Sbjct: 317 NEVDLQKLIELQVAALTETFHLPLDLEDDACSKVATKLLNLYRTGRLGHYTLDPL 371


>ref|NP_192803.4| GTP binding protein [Arabidopsis thaliana]
           gi|3600035|gb|AAC35523.1| contains similarity to
           GTP-binding proteins [Arabidopsis thaliana]
           gi|332657513|gb|AEE82913.1| GTP binding protein
           [Arabidopsis thaliana]
          Length = 377

 Score =  125 bits (315), Expect = 4e-27
 Identities = 71/168 (42%), Positives = 93/168 (55%)
 Frame = +1

Query: 1   TGAIKDTVVGEMKLAEYFLAILSLTDEYKKWRKFSSSETGVILTNEGISNSGKTQKRQYP 180
           TGAI D +VGE+KLA  FL IL+ + EYKKW K   S+      ++  S S    KRQY 
Sbjct: 225 TGAIPDDIVGELKLARLFLTILNSSHEYKKWAKLCKSQDLTESLSDESSKSDAKHKRQYA 284

Query: 181 TDHTQVHTNKPA*QAFLLHCSELN*H**LST*DFIVNNVRGTLFDVVSSFSGSMENEDDL 360
           TDHTQ                           DFIV +VR  L++ +S+F G++E+E  +
Sbjct: 285 TDHTQ---------------------------DFIVYDVRRVLYETISAFDGNLEDEISM 317

Query: 361 ARLIQEEFEVLLKVFHLPSESKESRYHRVAIKLLNLYRTGRLGHYTLD 504
             LI+ +F  L  V  +P E+ E    RVA K+LNLYRTGRLGHYTL+
Sbjct: 318 GNLIETQFAALRSVLRVPEEASEFADLRVASKILNLYRTGRLGHYTLE 365


>ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320477|gb|EFH50899.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  124 bits (312), Expect = 9e-27
 Identities = 71/168 (42%), Positives = 94/168 (55%)
 Frame = +1

Query: 1   TGAIKDTVVGEMKLAEYFLAILSLTDEYKKWRKFSSSETGVILTNEGISNSGKTQKRQYP 180
           TGAI D +VGE+KLA  FL IL+ + EYKKW K   S+      ++  S S   +KRQYP
Sbjct: 225 TGAIPDDIVGEIKLARLFLTILNSSYEYKKWAKLCKSQDLTESLSDESSKSDGKRKRQYP 284

Query: 181 TDHTQVHTNKPA*QAFLLHCSELN*H**LST*DFIVNNVRGTLFDVVSSFSGSMENEDDL 360
           TDHTQ                           DFIV +VR  L+  +S+F G++E++  +
Sbjct: 285 TDHTQ---------------------------DFIVYDVRRVLYQTISAFDGNLEDDISM 317

Query: 361 ARLIQEEFEVLLKVFHLPSESKESRYHRVAIKLLNLYRTGRLGHYTLD 504
             LI+ +F  L  V  +P E+ E    RVA K+LNLYRTGRLGHYTL+
Sbjct: 318 GNLIETQFAALRTVLMVPEEASEFTDLRVASKILNLYRTGRLGHYTLE 365


>ref|XP_003572110.1| PREDICTED: ribosome biogenesis GTPase A-like [Brachypodium
           distachyon]
          Length = 373

 Score =  124 bits (310), Expect = 1e-26
 Identities = 72/178 (40%), Positives = 95/178 (53%)
 Frame = +1

Query: 1   TGAIKDTVVGEMKLAEYFLAILSLTDEYKKWRKFSSSETGVILTNEGISNSGKTQKRQYP 180
           TGAIKD+++ E  +A++ LA+L+L  EY+ W   +       L  +G S   +  KRQY 
Sbjct: 223 TGAIKDSLLEEHDIAKFLLALLNLRKEYRDWDNLNRMGDKSCLA-DGTSGRSQHTKRQYS 281

Query: 181 TDHTQVHTNKPA*QAFLLHCSELN*H**LST*DFIVNNVRGTLFDVVSSFSGSMENEDDL 360
           +DHTQ                           DFIV  VR  LF+   SF G + NE++L
Sbjct: 282 SDHTQ---------------------------DFIVKAVRQVLFETTVSFQGDLGNENEL 314

Query: 361 ARLIQEEFEVLLKVFHLPSESKESRYHRVAIKLLNLYRTGRLGHYTLDPLPNNGHTII 534
            RL+  +F  L   F L +ES E    RVAIKLLNLYRTGRLGHYTLD +P   H ++
Sbjct: 315 RRLVDSQFTSLQNAFRLSAESSEDMNKRVAIKLLNLYRTGRLGHYTLDHVPEVRHEVV 372


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