BLASTX nr result

ID: Scutellaria23_contig00014205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00014205
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196466.1| pentatricopeptide repeat-containing protein [Ar...    70   1e-10
ref|XP_002873366.1| predicted protein [Arabidopsis lyrata subsp....    68   9e-10
ref|XP_002873361.1| pentatricopeptide repeat-containing protein ...    68   9e-10
ref|XP_002306009.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago ...    65   4e-09

>ref|NP_196466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171897|sp|Q9FNN9.1|PP370_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g08490 gi|9759343|dbj|BAB09998.1|
           selenium-binding protein-like [Arabidopsis thaliana]
           gi|332003927|gb|AED91310.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 849

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/66 (46%), Positives = 48/66 (72%)
 Frame = -3

Query: 199 LQRTNNLASYKSSFQVFADVIRSCASLSDVKSGQSLHTHVIKQGHSCCSLISKALLNMYA 20
           +Q    L+ + +  +VF DV+++CAS+SD+ SG++LH  V K GH  CS +SK++LNMYA
Sbjct: 8   VQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYA 67

Query: 19  KCRALE 2
           KCR ++
Sbjct: 68  KCRRMD 73


>ref|XP_002873366.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319203|gb|EFH49625.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/66 (43%), Positives = 48/66 (72%)
 Frame = -3

Query: 199 LQRTNNLASYKSSFQVFADVIRSCASLSDVKSGQSLHTHVIKQGHSCCSLISKALLNMYA 20
           +Q    L+ + +  +VF DV+++CAS+S++ SG++LH  V K GH  C+ +SK++LNMYA
Sbjct: 8   VQNFRLLSGFGTDHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYA 67

Query: 19  KCRALE 2
           KCR ++
Sbjct: 68  KCRRMD 73


>ref|XP_002873361.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319198|gb|EFH49620.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 849

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/66 (43%), Positives = 48/66 (72%)
 Frame = -3

Query: 199 LQRTNNLASYKSSFQVFADVIRSCASLSDVKSGQSLHTHVIKQGHSCCSLISKALLNMYA 20
           +Q    L+ + +  +VF DV+++CAS+S++ SG++LH  V K GH  C+ +SK++LNMYA
Sbjct: 8   VQNFRLLSGFGTDHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYA 67

Query: 19  KCRALE 2
           KCR ++
Sbjct: 68  KCRRMD 73


>ref|XP_002306009.1| predicted protein [Populus trichocarpa] gi|222848973|gb|EEE86520.1|
           predicted protein [Populus trichocarpa]
          Length = 870

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/57 (47%), Positives = 41/57 (71%)
 Frame = -3

Query: 172 YKSSFQVFADVIRSCASLSDVKSGQSLHTHVIKQGHSCCSLISKALLNMYAKCRALE 2
           ++  +Q  A +++SCA LS +K G++LH  +++ GH  C  +SKALLNMYAKC AL+
Sbjct: 20  FRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALD 76


>ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
           gi|355491760|gb|AES72963.1| hypothetical protein
           MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/76 (40%), Positives = 48/76 (63%)
 Frame = -3

Query: 229 SSMSEAFTLLLQRTNNLASYKSSFQVFADVIRSCASLSDVKSGQSLHTHVIKQGHSCCSL 50
           S  +EA +       + A++K   +V A +++SC++L     G+ LH++V+KQGH  C +
Sbjct: 14  SRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHV 73

Query: 49  ISKALLNMYAKCRALE 2
            SKALLNMYAKC  L+
Sbjct: 74  TSKALLNMYAKCGMLD 89


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