BLASTX nr result
ID: Scutellaria23_contig00014010
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00014010
(412 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002876296.1| RNA recognition motif-containing protein [Ar... 74 9e-12
ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837... 74 1e-11
gb|AFW74903.1| hypothetical protein ZEAMMB73_929566 [Zea mays] 74 2e-11
ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [S... 73 2e-11
ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group] g... 73 3e-11
>ref|XP_002876296.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297322134|gb|EFH52555.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 599
Score = 74.3 bits (181), Expect = 9e-12
Identities = 65/190 (34%), Positives = 91/190 (47%), Gaps = 53/190 (27%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQ-----------VDSVKQGV----YATQKDNKVDYSNVNMDFE 135
+ECGE+GHLS++CPK Q ++V G YA QK N D +N E
Sbjct: 400 FECGEKGHLSNACPKKHQNADDQANSKLGQETVDAGPAMQSYALQK-NIGDSYYMN---E 455
Query: 136 NQAITSET------SAVNS--KIRRRACYECGGRGHLSSSCPK----------------- 240
A T+ET SAV++ K++RR CYECG +GHLS++CPK
Sbjct: 456 TYAATNETNDGGLASAVSTTGKVKRRNCYECGEKGHLSTACPKKLQNTAHTNSQLEHQTV 515
Query: 241 ---VDQVDSVKQGSEATQKDNK----VDYSNVNVEFENQVI-----TSETNAVNS-KIRR 381
QV S ++ +N +D + V V S T+AV++ KI++
Sbjct: 516 EAGPVQVTSYSLQTKTRDTENNGGSFMDETYATVPISVDVTNGANDASLTSAVSTGKIKK 575
Query: 382 RTCYECGERG 411
R CYECGE+G
Sbjct: 576 RNCYECGEKG 585
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 19/104 (18%)
Frame = +1
Query: 157 TSAVNSKIRRRACYECGGRGHLSSSCPK----VDQVDSVKQGSEATQKDNKVD----YSN 312
T+ + KI+RR C+ECG +GHLS++CPK D + K G E + N
Sbjct: 387 TTVSSGKIKRRNCFECGEKGHLSNACPKKHQNADDQANSKLGQETVDAGPAMQSYALQKN 446
Query: 313 VNVEF---ENQVITSETN--------AVNSKIRRRTCYECGERG 411
+ + E T+ETN + K++RR CYECGE+G
Sbjct: 447 IGDSYYMNETYAATNETNDGGLASAVSTTGKVKRRNCYECGEKG 490
>ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837982 [Brachypodium
distachyon]
Length = 620
Score = 73.9 bits (180), Expect = 1e-11
Identities = 51/138 (36%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQVDSVKQGVYATQKDNKVDYSNVNMDFENQAITSETSAVNSKI 180
YECG GHLSS+CP + V + + S +M FE +++ SK
Sbjct: 478 YECGIPGHLSSACPNKKAAEVVSNNMQPVDEPK----SAPSMAFEQSKAADGSNSAPSK- 532
Query: 181 RRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNKVDYSNVNVEFENQVITSETN- 357
RR CYECG GHLSS+CP ++ DS +EA K N + + + + +TN
Sbjct: 533 -RRKCYECGISGHLSSACP--NKKDSQINSNEA--KPNGDSNTVPPAISDEKKASDDTNP 587
Query: 358 AVNSKIRRRTCYECGERG 411
A K +RRTCYECG G
Sbjct: 588 APPKKKKRRTCYECGIAG 605
Score = 68.9 bits (167), Expect = 4e-10
Identities = 47/137 (34%), Positives = 61/137 (44%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQVDSVKQGVYATQKDNKVDYSNVNMDFENQAITSETSAVNSKI 180
YECG GHLSS+CP + K V T D N+D S ++
Sbjct: 435 YECGVPGHLSSACP------NRKASVVVT------DEKKANID----------STTSASK 472
Query: 181 RRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNKVDYSNVNVEFENQVITSETNA 360
+RR CYECG GHLSS+CP + V + + S ++ FE +N+
Sbjct: 473 KRRTCYECGIPGHLSSACPNKKAAEVVSNNMQPVDEPK----SAPSMAFEQSKAADGSNS 528
Query: 361 VNSKIRRRTCYECGERG 411
SK RR CYECG G
Sbjct: 529 APSK--RRKCYECGISG 543
Score = 59.3 bits (142), Expect = 3e-07
Identities = 44/137 (32%), Positives = 56/137 (40%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQVDSVKQGVYATQKDNKVDYSNVNMDFENQAITSETSAVNSKI 180
+ECG GHLS +CP + +M E A T A + K
Sbjct: 392 FECGTPGHLSFACPNKKPSE--------------------DMSTETMAATDSAEAPSKK- 430
Query: 181 RRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNKVDYSNVNVEFENQVITSETNA 360
RR CYECG GHLSS+CP ++ S + K + I S T+A
Sbjct: 431 -RRTCYECGVPGHLSSACPN-------RKASVVVTDEKKAN------------IDSTTSA 470
Query: 361 VNSKIRRRTCYECGERG 411
+RRTCYECG G
Sbjct: 471 SK---KRRTCYECGIPG 484
Score = 54.7 bits (130), Expect = 8e-06
Identities = 31/79 (39%), Positives = 36/79 (45%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQVDSVKQGVYATQKDNKVDYSNVNMDFENQAITSETSAVNSKI 180
YECG GHLSS+CP N V + + E +A A K
Sbjct: 537 YECGISGHLSSACPNKKDSQINSNEAKPNGDSNTVPPA---ISDEKKASDDTNPAPPKKK 593
Query: 181 RRRACYECGGRGHLSSSCP 237
+RR CYECG GHLSS CP
Sbjct: 594 KRRTCYECGIAGHLSSECP 612
>gb|AFW74903.1| hypothetical protein ZEAMMB73_929566 [Zea mays]
Length = 647
Score = 73.6 bits (179), Expect = 2e-11
Identities = 53/154 (34%), Positives = 68/154 (44%), Gaps = 17/154 (11%)
Frame = +1
Query: 1 YECGERGHLSSSCPKV---DQVDSVKQGVYATQKDNKVDY---------SNVNMDFENQA 144
YECG GHLSS+CP D+ + A K + Y SN + +
Sbjct: 424 YECGTAGHLSSACPNKKDSDEKEDNSNSTIAASKKRRTCYECGIPGHLSSNCPNKKDPEF 483
Query: 145 ITSET-----SAVNSKIRRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNKVDYS 309
I+ E SA S +RR CYECG GHLSS+CP +SV E
Sbjct: 484 ISDEKNTNVDSAPASSKKRRTCYECGTPGHLSSACPNKRTSESVLNNREPADAK-----P 538
Query: 310 NVNVEFENQVITSETNAVNSKIRRRTCYECGERG 411
++ E E+N+V SK +RR CYECG G
Sbjct: 539 ATTIKPEETKAGDESNSVASK-KRRKCYECGISG 571
Score = 71.6 bits (174), Expect = 6e-11
Identities = 45/137 (32%), Positives = 63/137 (45%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQVDSVKQGVYATQKDNKVDYSNVNMDFENQAITSETSAVNSKI 180
YECG GHLSS+CP ++ DS + Y + + N ++ + S + +
Sbjct: 400 YECGTPGHLSSACP--NKKDSEVRKCYECGTAGHLSSACPNKKDSDEKEDNSNSTIAASK 457
Query: 181 RRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNKVDYSNVNVEFENQVITSETNA 360
+RR CYECG GHLSS+CP + + D N NV+ +A
Sbjct: 458 KRRTCYECGIPGHLSSNCPNKKDPEFIS------------DEKNTNVD----------SA 495
Query: 361 VNSKIRRRTCYECGERG 411
S +RRTCYECG G
Sbjct: 496 PASSKKRRTCYECGTPG 512
Score = 71.6 bits (174), Expect = 6e-11
Identities = 49/140 (35%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQVDSVKQGVYATQKDNKVDYSNVNMDFENQAITSETSAVNSKI 180
YECG GHLSS+CP +SV ++ + E E+++V SK
Sbjct: 506 YECGTPGHLSSACPNKRTSESV-----LNNREPADAKPATTIKPEETKAGDESNSVASK- 559
Query: 181 RRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNKVDYSNV---NVEFENQVITSE 351
+RR CYECG GHLSS+CP S K ++ ++SN V E +
Sbjct: 560 KRRKCYECGISGHLSSACP------SKKAAEPVCNEEKPGNHSNAVLPVVSDEKKASEDA 613
Query: 352 TNAVNSKIRRRTCYECGERG 411
+A K +RRTCYECG G
Sbjct: 614 KSAPAKKKKRRTCYECGIAG 633
Score = 58.5 bits (140), Expect = 5e-07
Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQVDSVKQGVYATQKDNKVDYSNVNMDF---ENQAITSETSAVN 171
YECG GHLSS+CP + V ++ ++SN + E +A SA
Sbjct: 565 YECGISGHLSSACPSKKAAEPV------CNEEKPGNHSNAVLPVVSDEKKASEDAKSAPA 618
Query: 172 SKIRRRACYECGGRGHLSSSCP 237
K +RR CYECG GHLSS CP
Sbjct: 619 KKKKRRTCYECGIAGHLSSECP 640
>ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
gi|241945761|gb|EES18906.1| hypothetical protein
SORBIDRAFT_09g001570 [Sorghum bicolor]
Length = 669
Score = 73.2 bits (178), Expect = 2e-11
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Frame = +1
Query: 1 YECGERGHLSSSCP--KVDQVDSVKQGVYATQKDNKVDYSNVNMDFENQAITSETSAVNS 174
YECG GHLSS+CP + D V + ++ V + + M E + SA +
Sbjct: 528 YECGTPGHLSSACPNKRSDSVPNNREPVDDAKPATTI------MSEETKVGDESNSAASK 581
Query: 175 KIRRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNKVDYSNVNVEFENQVITSET 354
K RR CYECG GHLSS+CP + V + + N V ++V + + +T
Sbjct: 582 K--RRKCYECGISGHLSSACPNKKAAEPVYNEEKPDNQSNTV----LSVVADEKKANEDT 635
Query: 355 -NAVNSKIRRRTCYECGERG 411
+A K +RRTCYECG G
Sbjct: 636 KSAPAKKKKRRTCYECGIAG 655
Score = 71.2 bits (173), Expect = 8e-11
Identities = 49/143 (34%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQVDSVK------QGVYATQKDNKVDYSNVNMDFENQAITSETS 162
YECG GHLSS+CP ++ K G ++ NK D ++ + + A S
Sbjct: 418 YECGTPGHLSSACPNKKDSEARKCYECGTPGHLSSACPNKKDSDVISDEKDANA----NS 473
Query: 163 AVNSKIRRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNKVDYSNVNVEFENQVI 342
A+ + +RR CYECG GHLSSSCP K+ SE + K
Sbjct: 474 AIAASKKRRTCYECGIPGHLSSSCPN-------KKDSEFISDEKK--------------- 511
Query: 343 TSETNAVNSKIRRRTCYECGERG 411
T+ +A +RRTCYECG G
Sbjct: 512 TNVDSATAPSKKRRTCYECGTPG 534
Score = 71.2 bits (173), Expect = 8e-11
Identities = 51/158 (32%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Frame = +1
Query: 1 YECGERGHLSSSCPKV-------DQVDSVKQGVYATQKDNKVDY-------------SNV 120
YECG GHLSS+CP D+ D+ A K + Y +
Sbjct: 442 YECGTPGHLSSACPNKKDSDVISDEKDANANSAIAASKKRRTCYECGIPGHLSSSCPNKK 501
Query: 121 NMDF-ENQAITSETSAVNSKIRRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNK 297
+ +F ++ T+ SA +RR CYECG GHLSS+CP + DSV E
Sbjct: 502 DSEFISDEKKTNVDSATAPSKKRRTCYECGTPGHLSSACPN-KRSDSVPNNREPVDDAKP 560
Query: 298 VDYSNVNVEFENQVITSETNAVNSKIRRRTCYECGERG 411
+ E + E+N+ SK +RR CYECG G
Sbjct: 561 A----TTIMSEETKVGDESNSAASK-KRRKCYECGISG 593
Score = 59.7 bits (143), Expect = 2e-07
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQVDSVKQGVYATQKDNKVDYSNVNMDFENQAITSET-SAVNSK 177
YECG GHLSS+CP + VY +K + + +++ + + +T SA K
Sbjct: 587 YECGISGHLSSACPN----KKAAEPVYNEEKPDNQSNTVLSVVADEKKANEDTKSAPAKK 642
Query: 178 IRRRACYECGGRGHLSSSCP 237
+RR CYECG GHLSS CP
Sbjct: 643 KKRRTCYECGIAGHLSSECP 662
>ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group]
gi|45680441|gb|AAS75242.1| hypothetical protein [Oryza
sativa Japonica Group] gi|52353509|gb|AAU44075.1|
putative RNA recognition motif (RRM)-containing protein
[Oryza sativa Japonica Group]
gi|113578012|dbj|BAF16375.1| Os05g0114500 [Oryza sativa
Japonica Group] gi|222629967|gb|EEE62099.1| hypothetical
protein OsJ_16883 [Oryza sativa Japonica Group]
Length = 548
Score = 72.8 bits (177), Expect = 3e-11
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQVDSVKQGVYATQKDNKVDYSNVNMDFENQAITSETSAVNSKI 180
YECG GHLSS+CP D+V + + + S ++ E+ I E+++ SK
Sbjct: 410 YECGIPGHLSSACPNKKAGDAVS----SDKGPDDETKSAPSITPEDNKIGEESNSAPSK- 464
Query: 181 RRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNKVDYSNVNVEFENQVITSETNA 360
+RR CYECG GHLSS+CP ++V +V E + + S + + + +TN
Sbjct: 465 KRRKCYECGIPGHLSSACP--NKVAAVNSDMEKSYGGSSTIPSATS---DGNKASDDTNP 519
Query: 361 VNS-KIRRRTCYECGERG 411
V + K +RRTCYECG G
Sbjct: 520 VPAKKKKRRTCYECGIAG 537
Score = 72.4 bits (176), Expect = 4e-11
Identities = 49/140 (35%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Frame = +1
Query: 1 YECGERGHLSSSCPKVDQVDSVKQGVYATQKDNKVDYSNVNMDFENQAITSETSAVNSKI 180
YECG GH+SSSCP +++ D N+D S S
Sbjct: 367 YECGTPGHISSSCPNKKASEAIS------------DEKKANVD----------SVTASSK 404
Query: 181 RRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNKVD---YSNVNVEFENQVITSE 351
+RR CYECG GHLSS+CP K+ +A D D S ++ E+ I E
Sbjct: 405 KRRTCYECGIPGHLSSACPN-------KKAGDAVSSDKGPDDETKSAPSITPEDNKIGEE 457
Query: 352 TNAVNSKIRRRTCYECGERG 411
+N+ SK +RR CYECG G
Sbjct: 458 SNSAPSK-KRRKCYECGIPG 476
Score = 55.5 bits (132), Expect = 4e-06
Identities = 32/93 (34%), Positives = 43/93 (46%)
Frame = +1
Query: 133 ENQAITSETSAVNSKIRRRACYECGGRGHLSSSCPKVDQVDSVKQGSEATQKDNKVDYSN 312
+NQ + + +S + R CYECG GH+SSSCP K+ SEA + K + +
Sbjct: 346 DNQKLNGNANPDSSNNKIRICYECGTPGHISSSCPN-------KKASEAISDEKKANVDS 398
Query: 313 VNVEFENQVITSETNAVNSKIRRRTCYECGERG 411
V S +RRTCYECG G
Sbjct: 399 VTA---------------SSKKRRTCYECGIPG 416