BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00013990
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   308   1e-81
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi...   306   2e-81
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...   301   1e-79
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ...   300   2e-79
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,...   273   2e-71

>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
           gi|296087770|emb|CBI35026.3| unnamed protein product
           [Vitis vinifera]
          Length = 675

 Score =  308 bits (788), Expect = 1e-81
 Identities = 163/242 (67%), Positives = 186/242 (76%), Gaps = 6/242 (2%)
 Frame = -3

Query: 708 PLSLPCFTFTSILEISENV----KKRRTQFTVFAFSSPAKDVWRRQNLVPPSPIEI--GP 547
           P S   F    I  I  N+     K +     F   S  KDVWRR   +P     +    
Sbjct: 17  PSSSSSFFSPHISYIKTNIFSPFNKTQKHRACFILVSVFKDVWRR---LPDETTSLLSSS 73

Query: 546 PEHHRRKHNSGFIDHSVDMDELLSSIHQTSDEHQLFALMSLYKGRCLSVRFMVTLLSREP 367
            +H  RK     +DHSVDMDELL+SI QTS+E +L++LMS YKGR LS+RFMV+LLSREP
Sbjct: 74  RQHRPRKQRVVHLDHSVDMDELLASISQTSNEQELYSLMSPYKGRQLSIRFMVSLLSREP 133

Query: 366 DWQRSLALLDWMNEEALYTPSVFAYNVVLRNVLRAKQWMVAYGLFDEMRQRALSPDKYTY 187
           DWQRSLALLDW+NEEA Y+PSVFAYNVV+RNVLRAKQW +A+GLF+EMRQRAL+PD+YTY
Sbjct: 134 DWQRSLALLDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTY 193

Query: 186 STLITHFGKEGLFDDALSWLQKMEKDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKR 7
           STLITHFGKEG+FD ALSWLQKME+DRV GDLVLYSNLIELSRKLCDYSKAISIFSRLKR
Sbjct: 194 STLITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKR 253

Query: 6   SG 1
           SG
Sbjct: 254 SG 255


>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
           gi|449530101|ref|XP_004172035.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
          Length = 680

 Score =  306 bits (785), Expect = 2e-81
 Identities = 156/221 (70%), Positives = 185/221 (83%), Gaps = 5/221 (2%)
 Frame = -3

Query: 648 KRRTQFTVF--AFSSPAKDVWRRQNLVPPSPIEIGPPEHHR---RKHNSGFIDHSVDMDE 484
           K RT+  +F  + SS +KD+WRRQ     S   + P ++ R   R   S  +DHS+DMDE
Sbjct: 39  KPRTRIPIFTASSSSTSKDIWRRQTPSEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDE 98

Query: 483 LLSSIHQTSDEHQLFALMSLYKGRCLSVRFMVTLLSREPDWQRSLALLDWMNEEALYTPS 304
           LL+SI QT +E +L++++S YKGR LS+RFMV+LLSRE DWQRSLA+LDW+NEEALYTPS
Sbjct: 99  LLASIGQTKNEQELYSVLSPYKGRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPS 158

Query: 303 VFAYNVVLRNVLRAKQWMVAYGLFDEMRQRALSPDKYTYSTLITHFGKEGLFDDALSWLQ 124
           V+AYNVVLRNVLRAKQW +A+GLFDEMRQRAL+ D+YTYSTLIT+FGKEG+FD ALSWLQ
Sbjct: 159 VYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQ 218

Query: 123 KMEKDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSG 1
           KME+DRV GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSG
Sbjct: 219 KMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSG 259



 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 35/131 (26%), Positives = 70/131 (53%)
 Frame = -3

Query: 393 MVTLLSREPDWQRSLALLDWMNEEALYTPSVFAYNVVLRNVLRAKQWMVAYGLFDEMRQR 214
           ++ L  +  D+ +++++   +    + TP + AYN ++    +AK +  A  L  EMR  
Sbjct: 235 LIELSRKLCDYSKAISIFSRLKRSGI-TPDIVAYNTMINVFGKAKLFREARFLLKEMRAV 293

Query: 213 ALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEKDRVPGDLVLYSNLIELSRKLCDYSKA 34
            + PD  +YSTL+  F +   F +ALS + +M++   P DL   + +I++  +L    +A
Sbjct: 294 DVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEA 353

Query: 33  ISIFSRLKRSG 1
             +F R+++ G
Sbjct: 354 DRLFWRMRKIG 364


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39980, chloroplastic; Flags: Precursor
           gi|10176990|dbj|BAB10222.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 678

 Score =  301 bits (771), Expect = 1e-79
 Identities = 163/241 (67%), Positives = 188/241 (78%), Gaps = 5/241 (2%)
 Frame = -3

Query: 708 PLSLPCFTFTSI-LEISENVKKRRTQFTVFAFSSPA----KDVWRRQNLVPPSPIEIGPP 544
           PL+ P   +TSI        ++R   FTV A SS      K VWR+Q     +       
Sbjct: 17  PLTRP-HIYTSIPFSTIPEARQRNLIFTVSASSSSESTQNKKVWRKQP-EKNTTSSFQAL 74

Query: 543 EHHRRKHNSGFIDHSVDMDELLSSIHQTSDEHQLFALMSLYKGRCLSVRFMVTLLSREPD 364
             HRR   S F+DH+VDMDELL+SIHQT +E +LF+L+S YK R LS+RFMV+LLSRE D
Sbjct: 75  RKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSREND 134

Query: 363 WQRSLALLDWMNEEALYTPSVFAYNVVLRNVLRAKQWMVAYGLFDEMRQRALSPDKYTYS 184
           WQRSLALLDW++EEA YTPSVFAYNVVLRNVLRAKQ+ +A+GLFDEMRQRAL+PD+YTYS
Sbjct: 135 WQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYS 194

Query: 183 TLITHFGKEGLFDDALSWLQKMEKDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRS 4
           TLIT FGKEG+FD ALSWLQKME+DRV GDLVLYSNLIELSR+LCDYSKAISIFSRLKRS
Sbjct: 195 TLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRS 254

Query: 3   G 1
           G
Sbjct: 255 G 255


>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316573|gb|EFH46996.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 680

 Score =  300 bits (769), Expect = 2e-79
 Identities = 160/237 (67%), Positives = 186/237 (78%), Gaps = 6/237 (2%)
 Frame = -3

Query: 693 CFTFTSILEISENVKKRRTQFTVFAFSSPA------KDVWRRQNLVPPSPIEIGPPEHHR 532
           C  F++I E     ++R   F V A SS +      K VWR+Q     +         HR
Sbjct: 26  CIPFSTIPE----ARQRNLIFKVSASSSSSSPSTQTKKVWRKQP-EKNTTSSFQALRKHR 80

Query: 531 RKHNSGFIDHSVDMDELLSSIHQTSDEHQLFALMSLYKGRCLSVRFMVTLLSREPDWQRS 352
           R   S F+DH+VDMDELL+SIHQT +E +LF+L+S YK R LS+RFMV+LLSRE DWQRS
Sbjct: 81  RYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDWQRS 140

Query: 351 LALLDWMNEEALYTPSVFAYNVVLRNVLRAKQWMVAYGLFDEMRQRALSPDKYTYSTLIT 172
           LALLDW++EEA YTPSVFAYNVVLRNVLRAKQ+ +A+GLFDEMRQRAL+PD+YTYSTLIT
Sbjct: 141 LALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLIT 200

Query: 171 HFGKEGLFDDALSWLQKMEKDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSG 1
            FGKEG+FD ALSWLQKME+DRV GDLVLYSNLIELSR+LCDYSKAISIFSRLKRSG
Sbjct: 201 SFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSG 257


>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  273 bits (699), Expect = 2e-71
 Identities = 139/213 (65%), Positives = 168/213 (78%)
 Frame = -3

Query: 639 TQFTVFAFSSPAKDVWRRQNLVPPSPIEIGPPEHHRRKHNSGFIDHSVDMDELLSSIHQT 460
           T+F + + S+  +D+W R     PS                 ++DHSVDM +LL SI QT
Sbjct: 39  TRFLLLSSSATKRDMWTRTQKTTPS-----------------YLDHSVDMKQLLISISQT 81

Query: 459 SDEHQLFALMSLYKGRCLSVRFMVTLLSREPDWQRSLALLDWMNEEALYTPSVFAYNVVL 280
            +E +L++L+S YK R LS+RFMV+L+S+E DWQRSLALLDW+NE A Y+PSVFAYNVVL
Sbjct: 82  QNEVELYSLLSPYKERQLSIRFMVSLISQEADWQRSLALLDWINEVARYSPSVFAYNVVL 141

Query: 279 RNVLRAKQWMVAYGLFDEMRQRALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEKDRVP 100
           RNVLRAK+W +A+GLFDEMRQRALSPD+YTYSTLIT FGK G+FD++L WLQ+ME+DRV 
Sbjct: 142 RNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVS 201

Query: 99  GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSG 1
           GDLVLYSNLIELSRKLCDYSKAISIF RLKRSG
Sbjct: 202 GDLVLYSNLIELSRKLCDYSKAISIFMRLKRSG 234